| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,267,524 | +TG | coding (640/867 nt) | unknown → | PTS system, N‑acetylmannosamine‑specific IIC component / PTS system, N‑acetylmannosamine‑specific IIB component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,267,524 | 1 | . | T | 100.0% | 205.8 / NA | 71 | N214Y (AAT→TAT) | unknown | PTS system, N‑acetylmannosamine‑specific IIC component / PTS system, N‑acetylmannosamine‑specific IIB component |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (43/28); total (43/28) | |||||||||||
| * | 1 | 1,267,524 | 2 | . | G | 100.0% | 214.4 / NA | 71 | N214D (AAT→GAT) | unknown | PTS system, N‑acetylmannosamine‑specific IIC component / PTS system, N‑acetylmannosamine‑specific IIB component |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (43/28); total (43/28) | |||||||||||
GTAAAACTGCATAACAAATATCACAACATTCAGTTGCCGCAAATTTTAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACA‑‑ATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACTGTGTGCCGAAAGCGCGCCGTAACGCCAT > 1/1267275‑1267757 || gTAAAACTGCATAACAAATATCACAACATTCAGTTGCCGCAAATTTTAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACcacat > 1:233577/1‑250 (MQ=255) aaaCTGCATAACAAATATCACAACATTCAGTTGCCGCAAATTTTAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGTCGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGTCCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGGACTTTCTTCTACGGTTTCTTAATGCGTTTATGCAGCGCGGTAGGGTTGCACcacatgat < 1:796043/251‑5 (MQ=255) aaaCTGCATAACAAATATCACAACATTCAGTTGCCGCAAATTTTAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACcacatgat < 1:830197/251‑5 (MQ=255) aCTGCATAACAAATATCACAACATTCAGTTGCCGCAAATTTTAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACcacatgattt < 1:692486/251‑7 (MQ=255) tGCATAACAAATATCACAACATTCAGTTGCCGCAAATTTTAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACcacatgatttac < 1:174876/251‑9 (MQ=255) gCATAACAAATATCACAACATTCAGTTGCCGCAAATTTTAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACcacatgatttac > 1:341158/1‑242 (MQ=255) cATAACAAATATCACAACATTCAGTTGCCGCAAATTTTAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTAccc < 1:712407/251‑1 (MQ=255) aCAAATATCACAACATTCAGTTGCCGCAAATTTTAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACcacatgat < 1:272190/241‑5 (MQ=255) aaaTATCACAACATTCAGTTGCCGCAAATTTTAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACcacatgat < 1:121521/239‑5 (MQ=255) aaaTATCACAACATTCAGTTGCCGCAAATTTTAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGtt > 1:364601/1‑251 (MQ=255) aaTATCACAACATTCAGTTGCCGCAAATTTTAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGAGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGtt > 1:428702/1‑250 (MQ=255) acaacaTTCAGTTGCCGCAAATTTTAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTac < 1:170515/251‑1 (MQ=255) acaTTCAGTTGCCGCAAATTTTAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGGTGCACCACATGATTTACCCGCTGTTCTGGTacac > 1:725921/1‑250 (MQ=255) acaTTCAGTTGCCGCAAATTTTAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGGTGCACCACATGATTTACCCGCTGTTCTGGTac > 1:803220/1‑248 (MQ=255) ttttAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGaa > 1:317360/1‑251 (MQ=255) ttttAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGaa > 1:874025/1‑251 (MQ=255) cttcttCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTc < 1:146298/250‑1 (MQ=255) cttcttCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTc < 1:308450/250‑1 (MQ=255) ttcGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACgg < 1:693149/251‑1 (MQ=255) cgTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAAc < 1:414691/237‑1 (MQ=255) ttttGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATc < 1:650340/250‑1 (MQ=255) ttttGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCg > 1:817626/1‑251 (MQ=255) gtgCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTacac > 1:112186/1‑203 (MQ=255) gtgACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGAt > 1:212119/1‑251 (MQ=255) aTTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACcacatgat > 1:742304/1‑151 (MQ=255) aTTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCgg < 1:39296/221‑1 (MQ=255) ttcttcTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAgg < 1:276165/251‑1 (MQ=255) tAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAGATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTAttt > 1:452937/1‑251 (MQ=255) tAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTc < 1:588970/176‑1 (MQ=255) tAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTAttt < 1:404193/251‑1 (MQ=255) aTTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTAc < 1:512621/251‑1 (MQ=255) aCCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTa > 1:230644/1‑250 (MQ=255) ttCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCgg > 1:343566/1‑182 (MQ=255) tGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAAt > 1:845320/1‑149 (MQ=255) ggTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACAcc > 1:806735/1‑128 (MQ=255) ggTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGc > 1:847508/1‑250 (MQ=255) gTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCgg < 1:250260/171‑1 (MQ=255) aTTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGa > 1:837954/1‑250 (MQ=255) cGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGa > 1:645715/1‑250 (MQ=255) ggTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGaca > 1:45004/1‑250 (MQ=255) gTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGacac < 1:525173/250‑1 (MQ=255) aCATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCatga > 1:444606/1‑251 (MQ=255) tCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGc < 1:560497/198‑1 (MQ=255) gggCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACgg > 1:593484/1‑251 (MQ=255) cAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCatga > 1:861084/1‑231 (MQ=255) gCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTg > 1:148122/1‑251 (MQ=255) ttcttcTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGacac < 1:846340/215‑1 (MQ=255) ttcttcTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGt > 1:314935/1‑223 (MQ=255) ttcttcTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAAt > 1:210451/1‑251 (MQ=255) cttctACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCg < 1:763816/98‑1 (MQ=255) cttctACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGAAGTTCGGCTTGACGGCAGCCTGTTTGGCAATGt > 1:416656/1‑251 (MQ=255) aCGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCAc < 1:213993/251‑1 (MQ=255) gTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACtg > 1:716986/1‑250 (MQ=255) gTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACtg < 1:37318/250‑1 (MQ=255) gTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGACTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACtg < 1:221971/250‑1 (MQ=255) ttCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGCAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACtgtgt > 1:431172/1‑251 (MQ=255) ttCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGCAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACtgtgt > 1:436837/1‑251 (MQ=255) ttCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACtgtgt > 1:879781/1‑251 (MQ=255) ttCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACtgtgt > 1:238816/1‑251 (MQ=255) ttCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACtgtg < 1:641013/250‑1 (MQ=255) ttCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACtg < 1:477804/248‑1 (MQ=255) ttCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGATTCTTTGCCGGACGTTTCGACACCATGATGTGCGGCTGGACGGCAGCCTGTTTGGCAATGTATCACtgtgt > 1:803057/1‑251 (MQ=255) cTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTa > 1:823063/1‑60 (MQ=255) cTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGc < 1:523039/234‑1 (MQ=255) cTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACtg > 1:417961/1‑246 (MQ=255) cTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACtg > 1:320386/1‑246 (MQ=255) ttAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACTGTGTGc > 1:630979/1‑250 (MQ=255) gCGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATAGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACTGTGTGCCGAAAg > 1:141937/1‑251 (MQ=255) cGTTTATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACTGTGTGCCGAAAg < 1:475301/250‑1 (MQ=255) tATGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTgg > 1:188503/1‑47 (MQ=255) aTGCGGCGCGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGa > 1:173531/1‑156 (MQ=255) gcgcGGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACTGTGTGCCGAAAGCGCGCCGTaa > 1:300850/1‑250 (MQ=255) gcgGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACTGTGTGCCGAAAGCGCGCCGTAACg > 1:300182/1‑250 (MQ=255) cgGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTc < 1:667918/191‑1 (MQ=255) cgGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACtg < 1:185319/226‑1 (MQ=255) cgGTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACTGTGTGCCGAAAGCGCGCCGTAACGc > 1:100599/1‑250 (MQ=255) gTAGGGTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACTGTGTGCCGAAAGCGCGCCGTAACGCCAt > 1:302990/1‑251 (MQ=255) gggTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCa > 1:305509/1‑128 (MQ=255) gggTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGt < 1:632935/184‑1 (MQ=255) gggTTGCACCACATGATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGc < 1:14478/209‑1 (MQ=255) || GTAAAACTGCATAACAAATATCACAACATTCAGTTGCCGCAAATTTTAGGCTTCTTCGGCGGTTCGCGTTTTGTGCCAATTGTGACGGCATTTGCCGCGATTTTTGTGGGAGCGATTTTCTTCTTAATTTGGCCGACCTTCCAAAATTGGTTATTGTCTGCGGGTGAACATATCGCTTCTATGGGCGCAATCGGCACTTTCTTCTACGGTTTCTTAATGCGTTTATGCGGCGCGGTAGGGTTGCACCACA‑‑ATTTACCCGCTGTTCTGGTACACCGAATTAGGCGGCACGGAAATCGTCAACGGCGAAACCATTATCGGCGCGCAAAAGATTTTCTTCGTCCAATTGGCGGATCCGAACCATCAAGGGCTATTTACCGAAGGTACGCGTTTCTTTGCCGGACGTTTCGACACCATGATGTTCGGCTTGACGGCAGCCTGTTTGGCAATGTATCACTGTGTGCCGAAAGCGCGCCGTAACGCCAT > 1/1267275‑1267757 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |