| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 824,671 | Δ1 bp | intergenic (+11/‑20) | unknown → / → unknown | Uroporphyrinogen‑III synthase (EC 4.2.1.75)/Uncharacterized protein EC‑HemX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 824,671 | 0 | C | . | 97.4% | 305.2 / 1.2 | 76 | intergenic (+11/‑20) | unknown/unknown | Uroporphyrinogen‑III synthase (EC 4.2.1.75)/Uncharacterized protein EC‑HemX |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (37/37); minor base T (1/1); total (38/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
ATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGTGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTTCTTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAACAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGTGCATGAAACCGTTGTGGTGAAGAAAACCGGTT > 1/824430‑824916 | aTTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGCAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAg > 1:198153/1‑251 (MQ=255) aTTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTaa > 1:608765/1‑250 (MQ=255) gcgACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAAGTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAatca < 1:43244/248‑1 (MQ=255) gcgACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAatca < 1:809181/248‑1 (MQ=255) aTTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAat > 1:648321/1‑222 (MQ=255) ttAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTGAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACAt > 1:423306/1‑251 (MQ=255) gATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAAAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAAt < 1:443743/250‑1 (MQ=255) aTTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑g > 1:352531/1‑251 (MQ=255) cGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTT‑‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCga < 1:638751/251‑1 (MQ=255) aaaTGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCgatga > 1:200322/1‑251 (MQ=255) gAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATgg < 1:210853/180‑1 (MQ=255) cATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGAt < 1:253400/251‑1 (MQ=255) tAATTGGTTAAAAAGTTGTCAACTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGAttt < 1:763407/251‑1 (MQ=255) gTTAAAAAGTTGTCAACTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAata > 1:223303/1‑166 (MQ=255) gTTGTCAACTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATa > 1:187501/1‑251 (MQ=255) tGTCAACTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATAcc < 1:768645/251‑1 (MQ=255) aCTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCACTCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGc > 1:445632/1‑250 (MQ=255) aCTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGa > 1:74932/1‑242 (MQ=255) aCTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGAt > 1:405289/1‑243 (MQ=255) ttattaCAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTTTTTTTTAAAAGGAAACGAAAATGGCTAAAAAGAATTCCAATCATCCAAAAAAAAATGCGAAAATTGAA‑ATCAAATTGGATGTAACCGATGATCTTAATTTACCGaccaaaattacaccccca > 1:488423/1‑235 (MQ=255) ttattaCAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATg < 1:30722/209‑1 (MQ=255) ttattaCAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTa > 1:488407/1‑251 (MQ=255) tattaCAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATg > 1:463870/1‑208 (MQ=255) ttaCAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATg < 1:469240/251‑1 (MQ=255) tAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAac < 1:173664/248‑1 (MQ=255) aTTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAgg < 1:161668/251‑1 (MQ=255) aTTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAgg < 1:307970/251‑1 (MQ=255) tGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATg > 1:356522/1‑224 (MQ=255) ggCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATg > 1:636878/1‑223 (MQ=255) gAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGAc < 1:693140/250‑1 (MQ=255) gAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGAc < 1:616230/250‑1 (MQ=255) gAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGAc < 1:554184/250‑1 (MQ=255) aGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGAc < 1:190644/248‑1 (MQ=255) gCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATAcc > 1:421736/1‑206 (MQ=255) ttAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAAc < 1:390330/250‑1 (MQ=255) aTGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATcc < 1:615965/112‑1 (MQ=255) gATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCAc < 1:813587/185‑1 (MQ=255) aaaCTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAAc < 1:83227/251‑1 (MQ=255) cTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAAt < 1:497689/117‑1 (MQ=255) cTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGAc > 1:853302/1‑198 (MQ=255) cTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGa > 1:217618/1‑251 (MQ=255) tttATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGAt < 1:794771/251‑1 (MQ=255) taattaCAACCCTAATTCCAATTTCG‑TAAACAAACCTTTTTTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAgg < 1:511205/187‑1 (MQ=255) attaCAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGaaa < 1:163761/199‑1 (MQ=255) ttaCAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGAt > 1:195810/1‑149 (MQ=255) aaCCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCg > 1:251090/1‑244 (MQ=255) aaCCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGTGCATGa < 1:42390/251‑1 (MQ=255) aCCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGTGCATGaa < 1:633630/251‑1 (MQ=255) ccTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTCTAGGAAACGAATCTGGCTAACAAGAAATCCAATCATCCGAGAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAACGATGATCTTGTTTTAGCCACACAAGATACCACGCCTAATg > 1:428362/1‑155 (MQ=255) ccTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATg > 1:45086/1‑155 (MQ=255) ccTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAac > 1:841873/1‑158 (MQ=255) ccTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGAc < 1:539811/186‑1 (MQ=255) ccTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGAc < 1:26426/186‑1 (MQ=255) ccTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAAc < 1:771567/192‑1 (MQ=255) ccTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAAc > 1:77464/1‑192 (MQ=255) ccTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGc < 1:565672/230‑1 (MQ=255) ccTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAAc > 1:691678/1‑236 (MQ=255) ccTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAAc > 1:837001/1‑236 (MQ=255) ccTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGTGc < 1:214427/245‑1 (MQ=255) ccTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGTGCATGaaa > 1:844869/1‑251 (MQ=255) ccTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGTGCATGaaa > 1:118219/1‑251 (MQ=255) ccTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGTGCATGaa < 1:809701/250‑1 (MQ=255) cTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGTGCATGAAAc < 1:790487/251‑1 (MQ=255) ttattaCAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGTGCATGAAAc > 1:548597/1‑250 (MQ=255) tattaCAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGGGCATGAAACCg > 1:822784/1‑251 (MQ=255) attaCAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGACGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGTGCATGAAACCGt > 1:353379/1‑251 (MQ=255) attaCAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATCAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGTGCATGAAACCGt < 1:633270/251‑1 (MQ=255) ttaCAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAAt > 1:475971/1‑100 (MQ=255) ttaCAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGAt > 1:316732/1‑122 (MQ=255) ttaCAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGTGCATGAAACCGtt > 1:215396/1‑251 (MQ=255) ttaCAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGTGCATGAAACCGtt > 1:548859/1‑251 (MQ=255) taCAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGTGCATGAAACCGTtg < 1:299624/251‑1 (MQ=255) gTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGc > 1:623787/1‑137 (MQ=255) tCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGAt < 1:893426/227‑1 (MQ=255) aacaacACTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGTGCATGAAACCGTTGTGGTGAAGAAAAc < 1:7709/251‑1 (MQ=255) cacTTT‑TTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAAAAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGTGCATGAAACCGTTGTGGTGAAGAAAACCGGtt > 1:508715/1‑251 (MQ=255) | ATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGTGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAAGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTTCTTTTTTATAGGTAACGAATATGGCTAACAAGAAATCCAATCATCCGAAAAACAATGCGGAAATTGAACATAAAATT‑GATGTCAGCGATGATCTTGATTTAGCGACACAAGATACCACGCCTAATGAACACGTTGAAACAAATGCAGAGGATAAGACAGAAACGATGCAACAAAATGAAGAAAAAATCACGCCGTCAGAGCAAAAACCGATCGTGCATGAAACCGTTGTGGTGAAGAAAACCGGTT > 1/824430‑824916 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |