| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 896,009 | C→T | D191D (GAC→GAT) | unknown → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 896,009 | 0 | C | T | 98.8% | 238.8 / NA | 84 | D191D (GAC→GAT) | unknown | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (35/48); minor base G (1/0); total (36/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTGTCGAAGATTGTGGGCAAAGCGTCGGCGCGTACGATTTTTGACGATCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCACTTTCGCGATCGTCTCAACGAACGCAAACGCCGGCAAGGCTTGGCGGGCGACAGTCGTTCTGTTGAAAACCAAGTGCAAAAGCAACGACAAACGATAGACGACGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGCGAACCGCTCTATAAAAGCAATAAAAATATCAATGTAGACTGGATGGATCCGTATTCGCGGGGTTGGTAAAGCATGGCGCGGCAGCTAATTCTCCTTGTTGGCGACGATGCCACGTTAGCGCGCCAATGGGAATACTTTCCTGCCCTGAAAAGTGCGGTGTGGATTGGCGGTGTTTTGC > 1/895764‑896247 | ttggcGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGt < 1:379285/246‑1 (MQ=255) gATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGtt > 1:691709/1‑251 (MQ=255) atCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACgag < 1:169170/250‑1 (MQ=255) cGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGaa < 1:93155/251‑1 (MQ=255) tGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCaaa < 1:103833/251‑1 (MQ=255) gcAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTcgcg > 1:728734/2‑251 (MQ=255) gTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTcaca > 1:51507/1‑215 (MQ=255) gTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCgcggcg > 1:856860/1‑251 (MQ=255) cttcttACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTAAACGAACGTAAACGCCGTCAAGGCTTGGGGGGGGACAGTCGTCCCGTTGAAAACCAAATGCAGAAGCAACGCCAAACGAAAGACGAGGCGTTTCGCCGTTTTCCCACCCAACGAGAATCAATTGAACGCCAAATTCGCGGCGaa > 1:34409/1‑251 (MQ=255) tcttACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACgag > 1:169389/1‑220 (MQ=255) tcttACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAg > 1:157277/1‑251 (MQ=255) tcttACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAg > 1:192685/1‑251 (MQ=255) cGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAAc < 1:580052/251‑1 (MQ=255) cGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAAc < 1:65591/251‑1 (MQ=255) attattTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACgag < 1:289451/213‑1 (MQ=255) attattTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCg > 1:605750/1‑251 (MQ=255) cAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATaa < 1:445568/251‑1 (MQ=255) cAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATaa < 1:871342/251‑1 (MQ=255) cAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATaa < 1:300540/251‑1 (MQ=255) aTTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATaaaa > 1:403612/1‑251 (MQ=255) tttAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAg < 1:490626/251‑1 (MQ=255) tttAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAg < 1:473484/251‑1 (MQ=255) tttAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAg < 1:114056/251‑1 (MQ=255) aGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGAGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGGTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAg > 1:662983/1‑247 (MQ=255) aTCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAAc < 1:412979/231‑1 (MQ=255) caacaaCTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATaaaaa > 1:115215/1‑251 (MQ=255) caacaaCTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATaaaaa < 1:172984/251‑1 (MQ=255) caacTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGaa > 1:197761/1‑192 (MQ=255) caacTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAg < 1:654266/239‑1 (MQ=255) caacTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGAGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAg < 1:610864/239‑1 (MQ=255) acTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGc < 1:730839/202‑1 (MQ=255) cTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAAc > 1:712332/1‑223 (MQ=255) cAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAg > 1:759924/1‑234 (MQ=255) cAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATg < 1:716841/251‑1 (MQ=255) cAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGAGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATg > 1:549811/1‑251 (MQ=255) aTCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAAc < 1:222755/195‑1 (MQ=255) aTCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATg < 1:392045/249‑1 (MQ=255) cGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGatt < 1:278285/251‑3 (MQ=255) gtgtGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAg < 1:748508/226‑1 (MQ=255) gtgtGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAg < 1:104400/226‑1 (MQ=255) gtgtGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGt < 1:714529/244‑1 (MQ=255) gtgtGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATtgg > 1:472438/1‑251 (MQ=255) gtgtGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCCCTATAAAAGCAATAAAAATATTAATGTAGatt > 1:474416/1‑247 (MQ=255) gtgtGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAAACAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGaa > 1:47186/1‑179 (MQ=255) gtgAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTg > 1:317218/1‑184 (MQ=255) gtgAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGc < 1:863329/225‑1 (MQ=255) gtgAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCGCTATAAAAGCAATAAAAATATTAATGTAGATtgga > 1:158483/1‑250 (MQ=255) gcgAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATtgga > 1:321731/3‑250 (MQ=255) tgAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATtggac < 1:541652/250‑2 (MQ=255) tgAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATtggac < 1:126249/250‑2 (MQ=255) tgAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATtggac < 1:122577/250‑2 (MQ=255) tgAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGAGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATtggac < 1:645200/250‑2 (MQ=255) gAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACgag > 1:714799/1‑173 (MQ=255) gAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATaaaa > 1:766268/1‑230 (MQ=255) tAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATc < 1:863042/251‑1 (MQ=255) tGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTcac < 1:508193/251‑3 (MQ=255) aaTTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTcacg < 1:106947/250‑4 (MQ=255) aTGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGTTGGt < 1:898787/251‑1 (MQ=255) cgcgATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGTTGGTaaac < 1:795635/251‑2 (MQ=255) aTTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGTTGGTaaactatg > 1:783882/1‑246 (MQ=255) aTTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGCAGATTGGACGGATCCGTATTc > 1:894766/1‑232 (MQ=255) aTTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGGGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGGTGGTaaactatg > 1:61574/1‑246 (MQ=255) cGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGTTGGTaaactat < 1:285007/242‑5 (MQ=255) gcattttCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATaaa > 1:428050/5‑181 (MQ=255) ttCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATaaa < 1:833959/176‑1 (MQ=255) aacgaacgTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGTTGGTAAACTATGGCGCGGCAGTTAATtcttctcattggtga < 1:585950/251‑13 (MQ=255) aacgTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGTTGGTAAACTATGGCGCGGCAGTTAATTCTTCTCATTGGTGACGAt > 1:259635/1‑251 (MQ=255) cgtaaaCGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGTTGGTaaacta < 1:42119/211‑4 (MQ=255) cGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGTTGGTAAACTATGGCGCGGCAGTTAATTCTTCTCATTGGTGACGATGCCACGtt < 1:42654/251‑1 (MQ=255) ccgtcAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGt < 1:515434/164‑1 (MQ=255) gtcAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGTTGGTAAACTATGGCGCGGCAGTTAATTCTTCTCATTGGTGACGATGCCACGTTAgcg > 1:709852/3‑251 (MQ=255) gggtgACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAAc > 1:371048/5‑122 (MQ=255) ggtgACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGTTGGTAAACTATGGCGCGGCAGTTAATtcttc < 1:88790/208‑3 (MQ=255) tCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGTTGGTAAACTATGGCGCGGCAGTTAATTCTTCTCATTGGTGACGATGCCACGTTAGCGCACCAATGGGaacatttt < 1:444568/247‑7 (MQ=255) gTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTg < 1:848879/84‑1 (MQ=255) gTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGTTGGTAAACTATGGCGCGGCAGTTAATTCTTCTCATTGGTGACGATGCCACGTTAGCGCACCAATGGGAACATTTTCCTGc > 1:486308/1‑250 (MQ=255) gTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGt < 1:893543/137‑1 (MQ=255) aaCCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGTTGGTAAACTATGGCGCGGCAGTTAATTCTTCTCATTGGTGACGATGCCACGTTAGCGCACCAATGGGAACATTTTCCTGCCCTGAAAAGTg > 1:246518/1‑250 (MQ=255) aCCAAATGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGTTGGTAAACTATGGCGCGGCAGTTAATTCTTCTCATTGGTGACGATGCCACGTTAGCGCACCAATGGGAACATTTTCCTGCCCTGAAAAGTGCg > 1:573032/1‑251 (MQ=255) aatGCAGAAGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGTTGGTAAACTATGGCGCGGCAGTTAATTCTTCTCATTGGTGACGATGCCACGTTAGCGCACCAATGGGAACATTTTCCTGCCCTGAAAAGTGCGgtat < 1:53669/249‑3 (MQ=255) aaGCAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGTTGGTAAACTATGGCGCGGCAGTTAATTCTTCTCATTGGTGACGATGCCACGTTAGCGCACCAATGGGAACATTTTCCTGCCCTGAAAAGTGCGGTATGGAt < 1:210647/248‑1 (MQ=255) cAACGACAAACGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATTCGTATTCACGGGGTTGGTAAACTATGGCGCGGCAGTTAATTCTTCTCATTGGTGACGATGCCACGTTAGCGCACCAATGGGAACATTTTCCTGCCCTGAAAAGTGCGGTATGGATTGGCgg < 1:214952/251‑1 (MQ=255) aCGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATc > 1:342901/1‑121 (MQ=255) aCGATAGACGATGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGTGAACCGCTCTATAAAAGCAATAAAAATATTAATGTAGATTGGACGGATCCGTATTCACGGGGTTGGTAAACTATGGCGCGGCAGTTAATTCTTCTCATTGGTGACGATGCCACGTTAGCGCACCAATGGGAACATTTTCCTGCCCTGAAAAGTGCGGTATGGATTGGCGGCGtttcac > 1:889965/1‑247 (MQ=255) | TTGTCGAAGATTGTGGGCAAAGCGTCGGCGCGTACGATTTTTGACGATCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCACTTTCGCGATCGTCTCAACGAACGCAAACGCCGGCAAGGCTTGGCGGGCGACAGTCGTTCTGTTGAAAACCAAGTGCAAAAGCAACGACAAACGATAGACGACGCGTTTCGCCGTTTTCACACGCAACGAGAATCTATTGAACGCCAAATTCGCGGCGAAAGCGAACCGCTCTATAAAAGCAATAAAAATATCAATGTAGACTGGATGGATCCGTATTCGCGGGGTTGGTAAAGCATGGCGCGGCAGCTAATTCTCCTTGTTGGCGACGATGCCACGTTAGCGCGCCAATGGGAATACTTTCCTGCCCTGAAAAGTGCGGTGTGGATTGGCGGTGTTTTGC > 1/895764‑896247 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |