Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	91,515	C→G	intergenic (‑102/+65)	unknown ← / ← unknown	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	91,515	0	C	G	100.0%	130.0 / NA	46	intergenic (‑102/+65)	unknown/unknown	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (23/23);  total (23/23)

GGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTACCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATGTTATATTATATAATATAACCGCGCAACCGCTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTGTCAAACGCTTGCCAGTTATCTACTTTATCCGTTTGTATATACTCAATAAAGCGCACAAACTCGCTTTTGGTTGACGAGAAGAAGATATACGGCGGGCGGGTG  >  1/91292‑91760                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                      gggATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATAttt                                                                                                                                                                                                                            >  1:741810/1‑251 (MQ=255)                           ttcGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAg                                                                                                                                                                                                  <  1:52956/251‑1 (MQ=255)                             cGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAggg                                                                                                                                                                                                <  1:899258/251‑1 (MQ=255)                                                  ttGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAggg                                                                                                                                                                                                <  1:879623/230‑1 (MQ=255)                                                                    cTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAata                                                                                                                                                                                                                               >  1:666076/1‑181 (MQ=255)                                                                                 tttttttGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAg                                                                                                                                            <  1:565840/251‑1 (MQ=255)                                                                                        ggTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATAc                                                                                                                                                        >  1:375626/1‑232 (MQ=255)                                                                                                 aTGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTaa                                                                                                                            >  1:327121/1‑251 (MQ=255)                                                                                                                                              cGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATc                                                                                                                          <  1:662032/208‑1 (MQ=255)                                                                                                                                                       ttGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATa                                                                                                                                                         <  1:251835/168‑1 (MQ=255)                                                                                                                                                       ttGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGc                                                                                                                 <  1:68252/208‑1 (MQ=255)                                                                                                                                                                           tCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaa                                                  >  1:519533‑M1/1‑196 (MQ=255)                                                                                                                                                                                ctTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcg                                             >  1:807424‑M1/1‑191 (MQ=255)                                                                                                                                                                                        cGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctc                                          <  1:218500‑M1/246‑64 (MQ=255)                                                                                                                                                                                           gtCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctcttagttga                                  >  1:248287‑M1/1‑180 (MQ=255)                                                                                                                                                                                                atattatattatataaTATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctcttagttgacgaga                             >  1:117604‑M1/4‑175 (MQ=255)                                                                                                                                                                                                atattatattatataaTATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctcttagttgacgaga                             >  1:73114‑M1/4‑175 (MQ=255)                                                                                                                                                                                                atattatattatataaTATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctcttagttgacgaga                             >  1:504031‑M1/4‑175 (MQ=255)                                                                                                                                                                                                atattatattatataaTATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaat                                                             <  1:112826‑M1/216‑45 (MQ=255)                                                                                                                                                                                                     atattatatAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATAc                                                                                                                                                        <  1:60078/123‑1 (MQ=255)                                                                                                                                                                                                          atataatataACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATcc                                                                                                                                                              >  1:756013/1‑112 (MQ=255)                                                                                                                                                                                                          atataatataACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAg                                                                                                                                            <  1:741147/130‑1 (MQ=255)                                                                                                                                                                                                          atataatataACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctcttagttgacgagaagaatatata                   >  1:808279‑M1/1‑165 (MQ=255)                                                                                                                                                                                                          atataatataACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctcttagttgacgagaagaatatata                   >  1:767160‑M1/1‑165 (MQ=255)                                                                                                                                                                                                          atataatataACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctcttagttgacgagaagaatatata                   >  1:822762‑M1/1‑165 (MQ=255)                                                                                                                                                                                                          atataatataACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctcttagttgacgagaagaatat                      >  1:278575‑M1/1‑165 (MQ=255)                                                                                                                                                                                                          atataatataACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataa                                                           >  1:10627‑M1/1‑165 (MQ=255)                                                                                                                                                                                                          atataatataACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatac                                                                  <  1:812665‑M1/204‑40 (MQ=255)                                                                                                                                                                                                          atataatataACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctac                                                                                     <  1:617446‑M1/185‑21 (MQ=255)                                                                                                                                                                                                           tataatataaCTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctcttagttgacgagaagaatatatac                  <  1:140861‑M1/251‑88 (MQ=255)                                                                                                                                                                                                             taatataaCTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTg                                                                                                                                         <  1:213836/130‑1 (MQ=255)                                                                                                                                                                                                             taatataaCTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCAt                                                                                                          <  1:476948/161‑1 (MQ=255)                                                                                                                                                                                                             taatataaCTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctcttagttgacgagaagaatatatacgg                >  1:895333‑M1/1‑162 (MQ=255)                                                                                                                                                                                                             taatataaCTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctcttagttgacgagaagaatatata                   >  1:41569‑M1/1‑162 (MQ=255)                                                                                                                                                                                                             taatataaCTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctcttagttgacgagaagaatatata                   <  1:628600‑M1/248‑87 (MQ=255)                                                                                                                                                                                                             taatataaCTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccg                                                                             >  1:267486‑M1/1‑162 (MQ=255)                                                                                                                                                                                                             taatataaCTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgcc                                                                                               <  1:601220‑M1/172‑11 (MQ=255)                                                                                                                                                                                                             taatataaCTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgc                                                                                                    <  1:178371‑M1/167‑6 (MQ=255)                                                                                                                                                                                                               atataaCTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctcttagttgacgagaagaatatatacggcg              >  1:809348‑M1/1‑160 (MQ=255)                                                                                                                                                                                                               atataaCTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctcttagttgacgagaagaatatata                   <  1:553053‑M1/246‑87 (MQ=255)                                                                                                                                                                                                               atataaCTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatac                                                                  >  1:622383‑M1/1‑160 (MQ=255)                                                                                                                                                                                                                  taaCTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctcttagttgacgagaagaatatatac                  >  1:507963‑M1/1‑157 (MQ=255)                                                                                                                                                                                                                     ctgcgcaaCCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctcttagttgacgagaagaatatatac                  <  1:516350‑M1/239‑88 (MQ=255)                                                                                                                                                                                                                           aaCCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccgtttgtatatactcaataaagcgcacaaactcgctcttagttgacgagaagaatatatacggcgggcgggtgatgt  >  1:763292‑M1/1‑148 (MQ=255)                                                                                                                                                                                                                            aCCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGAt                                                                                                                                              <  1:254889/110‑1 (MQ=255)                                                                                                                                                                                                                            aCCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTaacgcttgccagttatctactttatccg                                                                             <  1:498922‑M1/175‑29 (MQ=255)                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                      GGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTACCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATGTTATATTATATAATATAACCGCGCAACCGCTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAATCGCTATCCGCTTAGCATTGTCAAACGCTTGCCAGTTATCTACTTTATCCGTTTGTATATACTCAATAAAGCGCACAAACTCGCTTTTGGTTGACGAGAAGAAGATATACGGCGGGCGGGTG  >  1/91292‑91760

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑