Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	91,427	A→G	intergenic (‑14/+153)	unknown ← / ← unknown	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	91,427	0	A	G	100.0%	180.8 / NA	62	intergenic (‑14/+153)	unknown/unknown	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (23/39);  total (23/39)

AAAGGTTCAAGAAAATGAACGCGACTTACTGTGATAAATTTTGCTTCAATTTCTTGCACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTACCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATGTTATATTATATAATATAACCGCGCAACCGCTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAA  >  1/91181‑91638                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                    aaaGGTTCAAGAAAATGAACGCGACTCACTGTGATAAATTTTGCTTCAATTTCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCg                                                                                                                                                                                                                  <  1:131239/250‑1 (MQ=255)                tGAACGCGACTCACTGTGATAAATTTTGCTTCAATTTCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTa                                                                                                                                                                                                  <  1:365070/251‑1 (MQ=255)                  aaCGCGACTCACTGTGATAAATTTTGCTTCAATTTCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAg                                                                                                                                                                                                <  1:174407/251‑1 (MQ=255)                   aCGCGACTCACTGTGATAAATTTTGCTTCAATTTCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTaa                                                                                                                                                                                                 <  1:815894/249‑1 (MQ=255)                   aCGCGACTCACTGTGATAAATTTTGCTTCAATTTCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGc                                                                                                                                                                                               <  1:408130/251‑1 (MQ=255)                    cgcgACTCACTGTGATAAATTTTGCTTCAATTTCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGcc                                                                                                                                                                                              <  1:527882/251‑1 (MQ=255)                        actcaCTGTGATAAATTTTGCTTCAATTTCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCgg                                                                                                                                                                                          >  1:678724/5‑251 (MQ=255)                               gtgATAAATTTTGCTTCAATTTCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTgcggcg                                                                                                                                                                                   >  1:150830/1‑251 (MQ=255)                               gtgATAAATTTTGCTTCAATTTCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTgcggcg                                                                                                                                                                                   >  1:176062/1‑251 (MQ=255)                               gtgATAAATTTTGCTTCAATTTCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTgcggcg                                                                                                                                                                                   >  1:758435/1‑251 (MQ=255)                                     aaTTTTGCTTCAATTTCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCctc                                                                                                                                                                             <  1:777071/251‑1 (MQ=255)                                         ttGCTTCAATTTCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGc                                                                                                                                                                         <  1:216/251‑1 (MQ=255)                                          tGCTTCAATTTCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCt                                                                                                                                                                        <  1:509472/251‑1 (MQ=255)                                          tGCTTCAATTTCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCt                                                                                                                                                                        <  1:371180/251‑1 (MQ=255)                                          tGCTTCAATTTCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCt                                                                                                                                                                        <  1:671036/251‑1 (MQ=255)                                              tCAATTTCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACg                                                                                                                                                                    <  1:167278/251‑1 (MQ=255)                                                   ttCTTGTACTTTGCTTCTAATCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGc                                                                                                                                                                                                                 >  1:222324/1‑201 (MQ=255)                                                   ttCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTg                                                                                                                                                                                        <  1:585383/226‑1 (MQ=255)                                                   ttCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCt                                                                                                                                                                        >  1:80736/1‑242 (MQ=255)                                                   ttCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACgtgt                                                                                                                                                                 >  1:359383/1‑249 (MQ=255)                                                   ttCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACgtgt                                                                                                                                                                 >  1:401857/1‑249 (MQ=255)                                                   ttCTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACg                                                                                                                                                                    <  1:871077/246‑1 (MQ=255)                                                     cTTGTACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGcc                                                                                                                                                                                              >  1:807665/1‑218 (MQ=255)                                                         taCTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTTCTTTGTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAAtat                                                                                                                                                          <  1:657463/249‑3 (MQ=255)                                                         taCTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAAtat                                                                                                                                                          <  1:550765/249‑3 (MQ=255)                                                         taCTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAAtat                                                                                                                                                          <  1:668800/249‑3 (MQ=255)                                                         taCTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAAtat                                                                                                                                                          <  1:682021/249‑3 (MQ=255)                                                         taCTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAAtat                                                                                                                                                          <  1:268748/249‑3 (MQ=255)                                                         taCTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAAtat                                                                                                                                                          <  1:18596/249‑3 (MQ=255)                                                             ttGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATAttatat                                                                                                                                                     <  1:232394/251‑1 (MQ=255)                                                                cTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAAtattatatta                                                                                                                                                   <  1:447360/250‑1 (MQ=255)                                                                       ccAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTatataatat                                                                                                                                           <  1:454660/251‑1 (MQ=255)                                                                       ccAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTatataatat                                                                                                                                           <  1:283285/251‑1 (MQ=255)                                                                           ccATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTatataatat                                                                                                                                           >  1:520133/1‑247 (MQ=255)                                                                           ccATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAAc                                                                                                                                        <  1:60703/250‑1 (MQ=255)                                                                            cATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTAAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAActg                                                                                                                                      <  1:696227/251‑3 (MQ=255)                                                                             aTTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATc                                                                                                                                                                                                        <  1:755697/184‑1 (MQ=255)                                                                              ttCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAAc                                                                                                                                        >  1:506796/1‑247 (MQ=255)                                                                                ccGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATc                                                                                                                                                                                                        >  1:252375/1‑181 (MQ=255)                                                                                   gcgcATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATAttatat                                                                                                                                                     >  1:182467/1‑229 (MQ=255)                                                                                   gcgcATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAAc                                                                                                                                >  1:610117/1‑250 (MQ=255)                                                                                          gCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTatataatat                                                                                                                                           >  1:792733/1‑232 (MQ=255)                                                                                                          gaTTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGc                                                                                                                                                                         <  1:815179/186‑1 (MQ=255)                                                                                                                gggATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATAttt                                                                                                  >  1:741810/1‑251 (MQ=255)                                                                                                                   aTCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATtatattatat                                                                                                                                                <  1:156552/202‑1 (MQ=255)                                                                                                                   aTCCAAACAGTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCtt                                                                                                                                                                       <  1:451636/179‑1 (MQ=255)                                                                                                                          cATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCctc                                                                                                                                                                             <  1:49390/166‑1 (MQ=255)                                                                                                                          cATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATAttatat                                                                                                                                                     >  1:606949/1‑190 (MQ=255)                                                                                                                               aCTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATc                                                                                                                                                                                                        >  1:721859/1‑134 (MQ=255)                                                                                                                                          ttcGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAg                                                                        <  1:52956/251‑1 (MQ=255)                                                                                                                                            cGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAggg                                                                      <  1:899258/251‑1 (MQ=255)                                                                                                                                              ccATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGcc                                                                                                                                                                                              >  1:16729/1‑129 (MQ=255)                                                                                                                                                        gCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCctc                                                                                                                                                                             <  1:758051/136‑1 (MQ=255)                                                                                                                                                        gCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTatataatat                                                                                                                                           <  1:299404/170‑1 (MQ=255)                                                                                                                                                                 ttGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAggg                                                                      <  1:879623/230‑1 (MQ=255)                                                                                                                                                                    cAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAAtat                                                                                                                                                          <  1:787479/143‑3 (MQ=255)                                                                                                                                                                                   cTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAata                                                                                                     >  1:666076/1‑181 (MQ=255)                                                                                                                                                                                                tttttttGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAg                  <  1:565840/251‑1 (MQ=255)                                                                                                                                                                                                       ggTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATAc                              >  1:375626/1‑232 (MQ=255)                                                                                                                                                                                                                aTGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATATTATATTATATAATATAACTGCGCAACCGGTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTaa  >  1:327121/1‑251 (MQ=255)                                                                                                                                                                                                                  gTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACgtg                                                                                                                                                                  >  1:23147/1‑89 (MQ=255)                                                                                                                                                                                                                          aTTTTTGAGTTGTCATTTTTGTATCTCCTGCCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACg                                                                                                                                                                    <  1:50747/79‑1 (MQ=255)                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                    AAAGGTTCAAGAAAATGAACGCGACTTACTGTGATAAATTTTGCTTCAATTTCTTGCACTTTGCTTCTAACCAGCCATTCCGGCGCATAGCCGTTTTTCATTTGAGATTTCGGGATCCAAACATTTACTTTTTTCTTTTCGCCATCAAACAGCTCAACGTTTGCAATAAACATCATTGCTTTTTCACTTTCTTTTTTTGGTTTTCCGATGTTGATGTATTTTTGAGTTGTCATTTTTGTATCTCCTACCGCTCGTTAATCTTTGTAAGCCTCGGTGCGGCGTCCCTCTTGCTTACGTGTCTAATGTTATATTATATAATATAACCGCGCAACCGCTATTTTGTAAGTTTTGTGTAAATATTTAAAAGCCCCTTAAACATCGTTTAAAGGGCTTTTGAAGTTAAAATTTATAAACCAGATTATCCTCATACTCGCCATGATAGTTGAGGTTTGTCTTAA  >  1/91181‑91638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑