| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 394,991 | A→G | L72S (TTG→TCG) | unknown ← | Periplasmic nitrate reductase component NapD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 394,991 | 0 | A | G | 100.0% | 238.6 / NA | 84 | L72S (TTG→TCG) | unknown | Periplasmic nitrate reductase component NapD |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (36/48); total (36/48) | |||||||||||
AAACGGCAAACCGCTTTATCCCATTTAATTTCGGATTCTGCAGCTTCAACATTTTTGACCGGAATACTTAACCCGGCCGCCGTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCAACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATGTCTGTTTTATTCATATTCTTTCGGATAATGTATTTTTATCG > 1/394751‑395232 | aaaCGGCAAACCGCTTTATCCCATTTAATTTCGGATTCTGCAGCTTCAACATTTTTGACCGGAATACTTAACCCGGCCGCCGTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGt < 1:44774/250‑1 (MQ=255)aaaCGGCAAACCGCTTTATCCCATTTAATTTCGGATTCTGCAGCTTCAACATTTTTGACCGGAATACTTAACCCGGCCGCCGTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGt < 1:777303/250‑1 (MQ=255) gCTTTATCCCATTTAATTTCGGATTCTGCAGCTTCAACATTTTTGACCGGAATACTTAACCCGGCCGCCGTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACaaaa > 1:413987/1‑250 (MQ=255) aTCCCATTTAATTTCGGATTCTGCAGCTTCAACATTTTTGACCGGAATACTTAACCCGGCCGCCGTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGt < 1:706425/233‑1 (MQ=255) ccATTTAATTTCGGATTCTGCAGCTTCAACATTTTTGACCGGAATACTTAACCCGGCCGCCGTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGAt < 1:683481/251‑1 (MQ=255) ttAATTTCGGATTCTGCAGCTTCAACATTTTTGACCGGAATACTTAACCCGGCCGCCGTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATg < 1:603343/251‑1 (MQ=255) aaTTTCGGATTCTGCAGCTTCAACATTTTTGACCGGAATACTTAACCCGGCCGCCGTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATgag < 1:529859/251‑1 (MQ=255) aaTTTCGGATTCTGCAGCTTCAACATTTTTGACCGGAATACTTAACCCGGCCGCCGTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATgag < 1:354410/251‑1 (MQ=255) aaTTTCGGATTCTGCAGCTTCAACATTTTTGACCGGAATACTTAACCCGGCCGCCGTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATgag < 1:315651/251‑1 (MQ=255) aaTTTCGGATTCTGCAGCTTCAACATTTTTGACCGGAATACTTAACCCGGCCGCCGTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATgag < 1:694044/251‑1 (MQ=255) cAGCTTCAACATTTTTGACCGGAATACTTAACCCGGCCGCCGTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGc < 1:65730/250‑1 (MQ=255) cAACATTTTTGACCGGAATACTTAACCCGGCCGCCGTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTCATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCg > 1:442568/1‑243 (MQ=255) cATTTTTGACCGGAATACTTAACCCGGCCGCCGTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTAcc < 1:190809/239‑1 (MQ=255) cGGAATACTTAACCCGGCCGCCGTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGtttt > 1:191578/1‑251 (MQ=255) tACTTAACCCGGCCGCCGTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTa > 1:761860/1‑251 (MQ=255) ttaccccGGCCGCCGTTGCGGCTGCCATCGCCGCTTTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTCCCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAg < 1:289717/247‑1 (MQ=255) ccgTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGAttt > 1:877472/1‑249 (MQ=255) gCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGttc > 1:852851/1‑168 (MQ=255) cTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGa < 1:262375/251‑1 (MQ=255) cTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGa < 1:83509/251‑1 (MQ=255) tGCCATCGCCGCATTGGCTGTCATAAAGTCGCGACGGCTAAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCGGTTGAGGATAAATCAGGGGCACGGTAATCGCACCGTCAATCGCTTTTACCGACTCCATGTTCTTAAACAAGACATGCGGATCATGAGATGGCATTTCCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGa < 1:654928/250‑1 (MQ=255) gCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCTTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCg < 1:126301/213‑1 (MQ=255) cgccgcATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACAGGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCa < 1:766550/251‑1 (MQ=255) ccgcATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCCCTATTTTTATTTCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCaaa < 1:770803/251‑1 (MQ=255) gcATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCggg < 1:269493/225‑1 (MQ=255) gcATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGAt > 1:731692/1‑227 (MQ=255) aaGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGc < 1:884872/251‑1 (MQ=255) acTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTAtttttt < 1:588582/251‑1 (MQ=255) ttCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTTGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGctt > 1:282138/1‑251 (MQ=255) ttCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGctt > 1:890195/1‑251 (MQ=255) tAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCAACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGcttgc > 1:311761/1‑249 (MQ=255) aCTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGAc < 1:602422/251‑1 (MQ=255) aCTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGAc < 1:179351/251‑1 (MQ=255) cTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATgag > 1:70460/1‑127 (MQ=255) cTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGAt < 1:246924/129‑1 (MQ=255) cTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATCCGGATCATGAGTTTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGGGCGGGGGGATTGGCTGTTATTTTTTGCGGCTTGCCTTGCAccaccaaac > 1:112790/1‑247 (MQ=255) aTTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTAt < 1:298168/219‑1 (MQ=255) aTTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGa > 1:688223/1‑251 (MQ=255) ttttATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACa > 1:139864/1‑251 (MQ=255) tttATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTCCCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATCTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACaa < 1:605442/251‑1 (MQ=255) atCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACCCCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGc < 1:590563/251‑1 (MQ=255) atCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGc < 1:524273/251‑1 (MQ=255) tttGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATc < 1:146665/251‑1 (MQ=255) attCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGtt > 1:418276/1‑79 (MQ=255) attCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCg < 1:287079/251‑1 (MQ=255) attCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCg > 1:747512/1‑251 (MQ=255) ttCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTcaac < 1:784987/85‑1 (MQ=255) ttCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGAc > 1:850669/1‑231 (MQ=255) ttCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCg > 1:659448/1‑250 (MQ=255) ttCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGt > 1:39069/1‑251 (MQ=255) tCTGGCTTTTCGTCCTGTGAATGATAAATCAGCGACACGTTAATCACACCGTCATTCTCTTTTACCGACTCCATTTTCTTCAACAAACCATGCGGATCATGAGATTGTTTTTCCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTATTGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGt < 1:122488/251‑1 (MQ=255) tGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGAc > 1:792027/1‑224 (MQ=255) gTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATc > 1:579660/1‑235 (MQ=255) gTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATg > 1:251862/1‑251 (MQ=255) gTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTa > 1:602187/1‑251 (MQ=255) cTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTaaaa < 1:195723/251‑1 (MQ=255) gTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTAcc < 1:222374/98‑1 (MQ=255) gTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCg > 1:489830/1‑113 (MQ=255) ttGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATg < 1:73794/250‑1 (MQ=255) gatgatAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATGt > 1:853333/1‑249 (MQ=255) gatgatAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATGt > 1:647095/1‑249 (MQ=255) cGACACGGTAATCACACTGTCAATCTCTTTTACCGACTCCATGTGCTGCATAAAAACTTGGGGGACTGGAGATTGCATTCCCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCGGTAGCGTCTTCCATGGTTAAAATGTCTGTTTTATTc < 1:885280/247‑1 (MQ=255) acGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATGTCTGTTTTATTCATATTCtt > 1:628234/1‑251 (MQ=255) cGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATGTCTGTTTTATTc > 1:268761/1‑242 (MQ=255) cGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATGTCTGTTTTATTCATATTc < 1:671122/248‑1 (MQ=255) cGGTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATGTCTGTTTTATTCATATTCttt > 1:71141/1‑251 (MQ=255) gTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCg < 1:665603/210‑1 (MQ=255) gTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATGTCTGTTTTATTCATATTCTTTCg > 1:57219/1‑251 (MQ=255) gTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATGTCTGTTTTATTCATATTCTTTCg > 1:782133/1‑251 (MQ=255) gTAATCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATGTCTGTTTTATTCATATTCTTTCg > 1:615018/1‑251 (MQ=255) gTAACCACACCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAg < 1:500009/137‑1 (MQ=255) aTCACCCCGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAg < 1:818407/134‑1 (MQ=255) ccGTCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATGTCTGTTTTATTCATATTCTTTCGGATAATGTa > 1:572042/1‑251 (MQ=255) ttCAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCgc < 1:797180/199‑2 (MQ=255) cAATCTCTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATGTCTGTTTTATTCATATTCTTTCGGATAATGTAtttt < 1:804494/251‑1 (MQ=255) aaTCTCTTTTCCCGCCTCCATTTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATGTCTGTTTTATTCATATTCTTTCGGATAATGTAttttt < 1:474932/251‑1 (MQ=255) tctcTTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATGTCTGTTTTATTCATATTCTTTCGGATAATGTATTTTTAt < 1:147946/251‑1 (MQ=255) ctctTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTAttttt < 1:424638/145‑1 (MQ=255) ctctTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACaa < 1:666262/176‑1 (MQ=255) ctTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGc > 1:675972/1‑133 (MQ=255) ctTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGcac < 1:244174/160‑1 (MQ=255) ctTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATc < 1:556835/184‑1 (MQ=255) ctTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATGTCTGTTTTATTCATATTCTTTCGGATAATGTATTTTTATcg > 1:790712/1‑250 (MQ=255) ctTTTACCGACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATGTCTGTTTTATTCATATTCTTTCGGATAATGTATTTTTATcg > 1:635836/1‑250 (MQ=255) | AAACGGCAAACCGCTTTATCCCATTTAATTTCGGATTCTGCAGCTTCAACATTTTTGACCGGAATACTTAACCCGGCCGCCGTTGCGGCTGCCATCGCCGCATTGGCTTTCATAAAGTCTCGACGACTTAAATTCATAGCGTTTCCCCCACTATTTTTATATCTTTTTGATTATTCTGGCTGTTCGTCCTGTTGATGATAAATCAGCGACACGGTAATCACACCGTCAATCTCTTTTACCAACTCCATGTTCTTCAACAAAACATGCGGATCATGAGATTGCATTACCGCCACGATTTTGCCGATGTTTTCATTAAAGGTCGGGATTTCTGTA‑TGTGGAATCGCCAAAAGTGCGGTGCGAATGGCTGTTATTTTTTGCGGCTTGCCTTGCACCACCAGACCGACAATGTGCCAATCTTTAGCGTCTTCCATGGTTAAAATGTCTGTTTTATTCATATTCTTTCGGATAATGTATTTTTATCG > 1/394751‑395232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |