| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 89,106 | G→A | intergenic (+108/+294) | unknown → / ← unknown | ATP‑dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92)/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 89,106 | 0 | G | A | 100.0% | 221.9 / NA | 83 | intergenic (+108/+294) | unknown/unknown | ATP‑dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92)/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (47/36); total (47/36) | |||||||||||
TACCGCATGCCCGCGTGATGATTCATCAACCACTCGGCGGTTTCCGTGGTCAGGCATCGGATATTCAGATTCACGCGCAAGAAATTCTGAAAATCAAAAGCACTCTTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAAACTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCGGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCATTTTCTAAGCTGCTTGTTCAGCAGTTACGTCTGTTTCAACACTCAGCCTTTCCGC > 1/88862‑89350 | cgattctcaccggtatactctccctgactagccgtctcttcttgctcaggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAatca > 1:654170‑M1/107‑251 (MQ=255) accggtatactctccctgactagccgtctcttcttgctcaggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTAc > 1:785650‑M1/99‑251 (MQ=255) ccggtatactctccctgactagccgtctcttcttgctcaggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACa < 1:337643‑M1/154‑1 (MQ=255) ggtatactctccctgactagccgtctcttcttgctcaggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAAtcatca > 1:885288‑M1/96‑243 (MQ=255) ggtatactctccctgactagccgtctcttcttgctcaggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATg < 1:270272‑M1/156‑1 (MQ=255) ggtatactctccctgactagccgtctcttcttgctcaggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacaTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATg < 1:289180‑M1/156‑1 (MQ=255) gtatactctccctgactagccgtctcttcttgctcaggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATga < 1:688670‑M1/157‑1 (MQ=255) ctccctgactagccgtctcttcttgctcaggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATgaaaagaaa < 1:123272‑M1/164‑1 (MQ=255) gactagccgtctcttcttgctcaggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAAcgg < 1:125721‑M1/169‑1 (MQ=255) cgtctcttcttgctcaggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTAt > 1:298091‑M1/75‑251 (MQ=255) cttcttgctcaggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGTGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAAcc > 1:454572‑M1/70‑251 (MQ=255) cttcttgctcaggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAAcc > 1:422870‑M1/70‑251 (MQ=255) ggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAAcgg > 1:853720‑M1/59‑227 (MQ=255) ggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAAc < 1:61365‑M1/167‑1 (MQ=255) ggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAAcc < 1:315883‑M1/182‑1 (MQ=255) ggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAAcc < 1:803784‑M1/182‑1 (MQ=255) ggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTg < 1:742378‑M1/193‑1 (MQ=255) ggaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTg < 1:850980‑M1/193‑1 (MQ=255) gaataactcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTg < 1:283475‑M1/193‑1 (MQ=255) actcttgccagtggctttatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTCATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTg < 1:443172‑M1/197‑1 (MQ=255) tggctttatttaccctttgcataaatcaacattcccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAACCCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTCCCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTcagc > 1:52092‑M1/42‑248 (MQ=255) ctttatgtaccctttgcataaataaacattaccggacgGGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTAAAATTAAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATAAACCCGCCGTTTT‑GCCTGCTTGTTCAGCAGTGAAg > 1:546212‑M1/39‑251 (MQ=255) tatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAatca > 1:775803‑M1/36‑180 (MQ=255) tatgtaacctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTAc > 1:258638‑M1/36‑188 (MQ=255) cctttgcataaatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAAc < 1:126084‑M1/181‑1 (MQ=255) tttgcataaatcaccattcccggacgTGTTGCCGCCCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGTTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTCCCCTCAAATTAAAAGCAAAATCATCATGTACATAAAAAGAAAACCGGC‑GGATTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCaagaag > 1:14568‑M1/27‑251 (MQ=255) tttgcataaatcaacattaccggacgTGTTGCCGCCCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCaagaag > 1:199230‑M1/27‑251 (MQ=255) tttgcaaaaatcaacattcccggacgTGTTGCCGACCGCGGGATTTTAGAAAAATACCCACATAAACCGAGAAACAACATTTCTAAACTTATGTGGTTAAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTCCCCCCAATTTTAAAGCAGAATCATCATATACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCaagaag > 1:871521‑M1/27‑251 (MQ=255) aatcaacattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTGCATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTa < 1:441014‑M1/233‑1 (MQ=255) acattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAAcc > 1:119637‑M1/14‑195 (MQ=255) acattaccggacgTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGttt < 1:82718‑M1/190‑1 (MQ=255) gTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAAtcatca > 1:770647‑M1/2‑149 (MQ=255) gttgCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTAtt > 1:728968/1‑250 (MQ=255) tgCCGACCGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTAAATTTTACACATCATCAGCGACTAATTCCCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCgg < 1:98437/251‑1 (MQ=255) ccGCGAGATTTTAGAAAAATAACCACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAAcc < 1:234988/173‑1 (MQ=255) tAGAAAAATACCCACATAACCCAAGAACCAACATTCCTAACCTTATGTGTTTTAACCCCAAATAGCCCTACGTCAATTTTCCACATCATCAGCAACTAATTGCCCTCAAATTAAAGGCAGATTCATCTTTTACATGAAAAGAAAATGGGG‑GAATTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAAc < 1:339332/251‑1 (MQ=255) cccACATAAACTTAGAAACAAAATTTCTAAATTTATGTGGTTTAACCCCAAATGGCGCTCGGTCAATTTAACACATCAACAGCGACTAATTCCCCAAAAATTTAAAGAAAAATCATCATGAAAATAAAAAAAAAAACGGC‑GGTGAATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAActacta < 1:186738/250‑1 (MQ=255) ccACATAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCaagaa < 1:155574/193‑1 (MQ=255) acaTAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTAttt > 1:766158/1‑251 (MQ=255) acaTAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTAttt > 1:202496/1‑251 (MQ=255) caTAAACCTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAAcc > 1:105791/1‑148 (MQ=255) aaaaacccaaGAAAAAACATTTCTAAATTTATGTGGTTTAACGCAAAACAGCGCTACGTAAATTAAAAAAATAACCAGCGACTAATTCCCCTAAAATTTAAAGCAGAATCATCATGTGAATAAAAAG‑AAAACGGCGGGAGTATAAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGa < 1:589729/169‑1 (MQ=255) accTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAg > 1:417474/3‑251 (MQ=255) aGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAAcc > 1:757837/1‑139 (MQ=255) caTTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCgg > 1:806583/1‑251 (MQ=255) aTTTCAAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTAAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACAAGAAAAGAAAAACGGC‑GGAGTATTACCCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGc < 1:722697/251‑1 (MQ=255) tttCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAAcc > 1:853962/1‑129 (MQ=255) aaaCTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAAcgg < 1:87642/111‑1 (MQ=255) cTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAg > 1:742591/1‑244 (MQ=255) cTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGGATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACtt > 1:572760/1‑251 (MQ=255) aTGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGc > 1:270230/1‑191 (MQ=255) ggTTTACCGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTCCCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTACCCCGCCGTTTTTGCCTGCTTGTTcagcag < 1:501631/141‑1 (MQ=255) gTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAatca > 1:742142/1‑76 (MQ=255) gTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTAc > 1:177747/1‑84 (MQ=255) gTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAAcc < 1:491465/113‑1 (MQ=255) aCGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAAc > 1:192150/1‑197 (MQ=255) aCGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTAttt > 1:662673/1‑210 (MQ=255) cGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGc > 1:844053/1‑168 (MQ=255) cGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTa > 1:359437/1‑250 (MQ=255) aaaTAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCAtt > 1:727065/1‑251 (MQ=255) aaaTAGCGCTACGTAAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATAAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTAttt < 1:138079/157‑1 (MQ=255) aTAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAg > 1:775267/1‑133 (MQ=255) tAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCAtttt > 1:184297/1‑250 (MQ=255) cTACGTCAATTTTACACATCATCAGCGACTAATTCCCCTAAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCATTTTCTAAgc < 1:670077/251‑1 (MQ=255) aCGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTACGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCATTTTCTAAg > 1:360601/1‑248 (MQ=255) cGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAg > 1:767873/1‑124 (MQ=255) cGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTAttt > 1:383657/1‑146 (MQ=255) aTTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAg > 1:170814/1‑210 (MQ=255) aTTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCATTTTCTAAgc > 1:798865/1‑243 (MQ=255) aTTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCATTTTCTAAGCTGCTTGtt > 1:814622/1‑251 (MQ=255) aTTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCATTTTCTAAGCTGCTTGtt > 1:206022/1‑251 (MQ=255) cacaTCATCAGCGACTAATTCCCCTCAAATTAAAAGCAAAATCATCTTGTACATAAAAAGAAAACCGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCATTTTCTAAGCTGCTTGTTcagcag < 1:634004/251‑1 (MQ=37) catcatCAGCGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCATTTTCTAAGCTGCTTGTTCAGCAGtt > 1:645439/1‑251 (MQ=255) taaGCGATTAATTACCCTAAAATTAAAAGCAGAATCATCATTTACATAAAAAGAAAAACGGC‑GGATTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCATTTTCTAAGCTGCTTGTTCAGCAGTTACGTc < 1:545368/249‑1 (MQ=37) cGACTAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTACCCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCATTTTCTAAGCTGCTTGTTCAGCAGTTACGTCt < 1:607262/248‑1 (MQ=255) aCTAATTCCCCTAAAATTTAAAGCAGAATCATCATGTACATGAAAAAAAAAACGGC‑GGAGTATTACCCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCCCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCATTTTCTAAGCTGCTTGTTCAGCAGTTACGTCTGttt < 1:217153/250‑1 (MQ=255) tAATTCCCCTCAAATTTAAAGAAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTACCCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCATTTTCTAAGCTGCTTGTTCAGCAGTTACGTc < 1:135567/243‑1 (MQ=255) tAATTACCCTCAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCa > 1:276549/1‑212 (MQ=255) cAAATTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCATTTTCTAAGCTGCTTGTTCAGCAGTTACGTCTGTTTCAACACTCAga > 1:237272/1‑248 (MQ=255) aaTTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCATTTTCTAAGCTGCTTGTTCAGCAGTTACGTc < 1:391183/231‑1 (MQ=255) aaTTAAAAGCAGAATCATCATGTAAATAAAAAGAAAAACGGG‑GGAGTATTACCCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCa < 1:428903/200‑1 (MQ=37) aTTTAAAGCAGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCAt > 1:230976/1‑200 (MQ=255) aaaaGCAGAACCATCATGTACATGAAAAAAAAAACGGC‑GGAGTATAACCCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCATTTTCTAAGCTGCTTGTTCAGCAGTTACGTCTGTTTCAACACTCAGACTTTcggc < 1:190151/250‑4 (MQ=37) | TACCGCATGCCCGCGTGATGATTCATCAACCACTCGGCGGTTTCCGTGGTCAGGCATCGGATATTCAGATTCACGCGCAAGAAATTCTGAAAATCAAAAGCACTCTTGTTGCCGACCGCGAGATTTTAGAAAAATAACCACATAAAACTAGAAACAACATTTCTAAACTTATGTGGTTTAACGCCAAATAGCGCTACGTCAATTTTACACATCATCAGCGACTAATTACCCTCAAATTTAAAGCGGAATCATCATGTACATGAAAAGAAAAACGGC‑GGAGTATTAACCCGCCGTTTTTGCCTGCTTGTTCAGCAGTGAAGCGCTCAAGAAGAACCGCTATTTTCTAAGCTGCCTATTCGGCAGTAAATGAGTAGAACTTAACTACTATTTTCTAAGCTGCCTGTTCGGCAGTGAACTTTCAGTAAGAGCTACCATTTTCTAAGCTGCTTGTTCAGCAGTTACGTCTGTTTCAACACTCAGCCTTTCCGC > 1/88862‑89350 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |