Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 305,691 A→G Y18C (TAC→TGC)  unknown → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1305,6910AG100.0% 126.9 / NA 46Y18C (TAC→TGC) unknownhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (23/23);  total (23/23)

GAAGGATTTACATCTATTGAAGCATACAAAAATGATGATAGAGCGGGAGGGATTGTACTTCCACAACTCCTCACTTGCATGGAGAACGGTCATAAATATATAGCTATTGTAGAAAGTATTATTGAAGGACAAGTTCAAGTATCTATCAAACATATCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTACGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACGGGCTATCCACTCCTCAAATTAGCGCA  >  1/305471‑305929
                                                                                                                                                                                                                            |                                                                                                                                                                                                                                              
ggatttacatctattgaagcatacaaaaatAATGATGATAGAGCGGGAGGGATTGTACTTCCACAACTCCTCACTTGCATGGAGAACGGTCATAAATATATAGCTATTGTAGAAAGTATTATTGAAGGACAAGTTCAAGTATCTATCAAACATATCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATAc                                                                                                                                                                                                                    <  1:650926‑M2/219‑1 (MQ=255)
            attgaagcatacaaaaatAATGATGATAGAGCGGGAGGGATTGTACTTCCACAACTCCTCACTTGCATGGAGAACGGTCATAAATATATAGCTATTGTAGAAAGTATTATTGAAGGACAAGTTCAAGTATCTATCAAACATATCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATAc                                                                                                                                                                                                                    <  1:765811‑M2/219‑1 (MQ=255)
                       caaaaatAATGATGATAGAGCGGGAGGGATTGTACTTCCACAACTCCTCACTTGCATGGAGAACGGTCATAAATATATAGCTATTGTAGAAAGTATTATTGAAGGACAAGTTCAAGTATCTATCAAACATATCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTggagga                                                                                                                                                                                                        >  1:617898‑M2/8‑238 (MQ=255)
                                  atgaaAGAGCGGGAGGGATTGTACTTCCACAACTCCTCACTTGCATGGAGAACGGTCATAAATATATAGCTATTGTAGAAAGTATTATTGAAGGACAAGTTCAAGTATCTATCAAACATATCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACgg                                                                                                                                                                                                                  <  1:430415/217‑1 (MQ=255)
                                         agCGGGAGGGATTGTACTTCCACAACTCCTCACTTGCATGGAGAACGGTCATAAATATATAGCTATTGTAGAAAGTATTATTGAAGGACAAGTTCAAGTATCTATCAAACATATCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGc                                                                                                                                                                          <  1:606686/250‑1 (MQ=255)
                                          gCGGGAGGGATTGTACTTCCACAACTCCTCACTTGCATGGAGAACGGTCATAAATATATAGCTATTGTAGAAAGTATTATTGAAGGACAAGTTCAAGTATCTATCAAACATATCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAgg                                                                                                                                                                           >  1:470306/1‑248 (MQ=255)
                                                      gTACTTCCACAACTCCTCACTTGCATGGAGAACGGTCATAAATATATAGCTATTGTAGAAAGTATTATTGAAGGACAAGTTCAAGTATCTATCAAACATATCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGc                                                                                                                                                                          >  1:781533/1‑237 (MQ=255)
                                                            ccACAACTCCTCACTTGCATGGAGAACGGTCATAAATATATAGCTATTGTAGAAAGTATTATTGAAGGACAAGTTCAAGTATCTATCAAACATATCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATAtt                                                                                                                                                       >  1:353170/1‑250 (MQ=255)
                                                            ccACAACTCCTCACTTGCATGGAGAACGGTCATAAATATATAGCTATTGTAGAAAGTATTATTGAAGGACAAGTTCAAGTATCTATCAAACATATCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTc                                                                                                                                                      <  1:170695/251‑1 (MQ=255)
                                                                             cATGGAGAACGGTCATAAATATATAGCTATTGTAGAAAGTATTATTGAAGGACAAGTTCAAGTATCTATCAAACATATCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGAt                                                                                                                                      <  1:591777/250‑1 (MQ=255)
                                                                                                tatataGCTATTGTAGAAAGTATTATTGAAGGACAAGTTCAAGTATCTATCAAACATATCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGAt                                                                                                                                      <  1:490281/231‑1 (MQ=255)
                                                                                                         aTTGTAGAAAGTATTATTGAAGGACAAGTTCAAGTATCTATCAAACATATCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGc                                                                                                                                                                          >  1:442536/1‑186 (MQ=255)
                                                                                                                                    gTTCAAGTATCTATCAAACATATCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATAc                                                                                                                                                                                                                    >  1:259107/1‑117 (MQ=255)
                                                                                                                                              ctatcAAACATATCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATc                                                                                                     >  1:680275/1‑218 (MQ=255)
                                                                                                                                                     aCATATCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTg                                                                                                                                                   <  1:630219/165‑1 (MQ=255)
                                                                                                                                                       atatCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATc                                                                                                     >  1:897401/1‑209 (MQ=255)
                                                                                                                                                                            cAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGc                                                                                                                                                                          >  1:443325/1‑119 (MQ=255)
                                                                                                                                                                                taataaATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTAtt                                  >  1:816405/1‑251 (MQ=255)
                                                                                                                                                                                taataaATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTAtt                                  >  1:816354/1‑251 (MQ=255)
                                                                                                                                                                                              ttttgggttgtggtgTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACGGGCTATcc                    <  1:136898/242‑1 (MQ=255)
                                                                                                                                                                                                gTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGAt                                                                                                                                      >  1:91782/1‑135 (MQ=255)
                                                                                                                                                                                                gTTATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACa                                                                                                                     <  1:598176/152‑1 (MQ=255)
                                                                                                                                                                                                gTTATTGGTGGGGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACGGGCTATCCa                   >  1:396711/1‑250 (MQ=255)
                                                                                                                                                                                                 ttATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACGGGCTATCCAc                  <  1:443032/250‑1 (MQ=255)
                                                                                                                                                                                                 ttATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACGGGCTATCCAc                  <  1:840962/250‑1 (MQ=255)
                                                                                                                                                                                                  tATTGGTGGTGTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGc                                                                             <  1:481514/190‑1 (MQ=255)
                                                                                                                                                                                                       gtggtgTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACAt                                                                                                                           <  1:550565/139‑1 (MQ=255)
                                                                                                                                                                                                         ggtgTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGAt                                                                                                                                      >  1:592435/1‑126 (MQ=255)
                                                                                                                                                                                                         ggtgTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAaaag                                                                >  1:176415/1‑196 (MQ=255)
                                                                                                                                                                                                         ggtgTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTAt                                                        <  1:70671/204‑1 (MQ=255)
                                                                                                                                                                                                         ggtgTATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACGGGCTATCCACTCCTCAAAt         >  1:13166/1‑251 (MQ=255)
                                                                                                                                                                                                          gtgtATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGc                                                                                                                                 >  1:338053/1‑130 (MQ=255)
                                                                                                                                                                                                          gtgtATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACggg                          <  1:12991/233‑1 (MQ=255)
                                                                                                                                                                                                          gtgtATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACGGGCTATcc                    <  1:624218/239‑1 (MQ=255)
                                                                                                                                                                                                          gtgtATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACGGGCTATCCACTCCTCAAAtt        >  1:40347/1‑251 (MQ=255)
                                                                                                                                                                                                          gtgtATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACGGGCTATCCACTCCTCAAAtt        >  1:222913/1‑251 (MQ=255)
                                                                                                                                                                                                           tgtATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGAt                                                                                                                                      >  1:33005/1‑124 (MQ=255)
                                                                                                                                                                                                           tgtATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTacac                             >  1:624952/1‑229 (MQ=255)
                                                                                                                                                                                                           tgtATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACGGGCTATCCAc                  <  1:441726/240‑1 (MQ=255)
                                                                                                                                                                                                           tgtATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACGGGCTATCCAc                  >  1:181526/1‑240 (MQ=255)
                                                                                                                                                                                                           tgtATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACGGGCTATCCACTCCTCAAAtt        <  1:459169/250‑1 (MQ=255)
                                                                                                                                                                                                           tgtATATATTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACGGGCTATCCACTCCTCAAAtt        <  1:598461/250‑1 (MQ=255)
                                                                                                                                                                                                               tatatTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACGGGCTATCCACTCCTCAAATTAgcgc   <  1:767317/251‑1 (MQ=255)
                                                                                                                                                                                                                atatTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACa                                                                                                                     <  1:380574/136‑1 (MQ=255)
                                                                                                                                                                                                                atatTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACGGGCTATCCAc                  <  1:665197/235‑1 (MQ=255)
                                                                                                                                                                                                                atatTGAGCGGTGCGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACGGGCTATCCACTCCTCAAATTAGCGCa  >  1:784522/1‑251 (MQ=255)
                                                                                                                                                                                                                            |                                                                                                                                                                                                                                              
GAAGGATTTACATCTATTGAAGCATACAAAAATGATGATAGAGCGGGAGGGATTGTACTTCCACAACTCCTCACTTGCATGGAGAACGGTCATAAATATATAGCTATTGTAGAAAGTATTATTGAAGGACAAGTTCAAGTATCTATCAAACATATCTGAGTCTTAATTATGTCAAATAATAAATGTATTACTGTTATTGGTGGTGTATATATTGAGCGGTACGCTTGGCCACATTGGGATGAATTATACGGTTCTGGAGGAAGGGCTCTATCAGTCTTACAGTCCCTAGGCTGTGCTACAAAGCTATATTCTTGTTTAAATAAAGATAGTGCTAACATTTTACAAGCGAGAGCTGGAATCTATAAAACTTCCTTCGAAATATGCTCTTCTTTAAAAGAAAGTTATCGCCCGATAAAATTTCACTATTTACACGGGCTATCCACTCCTCAAATTAGCGCA  >  1/305471‑305929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑