Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 2,076,802 G→C intergenic (+171/‑44) unknown → / → unknown FMN adenylyltransferase (EC 2.7.7.2) / Riboflavin kinase (EC 2.7.1.26)/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*12,076,8020GC100.0% 210.9 / NA 71intergenic (+171/‑44)unknown/unknownFMN adenylyltransferase (EC 2.7.7.2) / Riboflavin kinase (EC 2.7.1.26)/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (25/46);  total (25/46)

ATTTCCGTCTTTTGACACACTAAAAGCGCAAATCGCGCAGGATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAATCCCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACAGAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTGATGTAACACATAACCCACAACAAGTGGCTTAAAATAAATTTAAATTTTTACACAAAACTGGAATAGAAA  >  1/2076556‑2077047
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                     
atTTCCGTCTTTTGACACACTAAAAGCGCAAATCGCGCAGGATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGt                                                                                                                                                                                                                                                  <  1:236980/251‑1 (MQ=255)
 tttCCGTCTTTTGACACACTAAAAGCGCAAATCGCGCAGGATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTa                                                                                                                                                                                                                                                 >  1:123849/1‑251 (MQ=255)
   tCCGTCTTTTGACACACTAAAAGCGCAAATCGCGCAGGATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAgg                                                                                                                                                                                                                                               <  1:362652/251‑1 (MQ=255)
    ccGTCTTTTGACCCACTATAAGCGTAAATCGCGCAGAATGTGAAGACGGCAAAAAAAGTTTTTGAGGCGTGGAAAAATTTTTGCCAACCCCTGCTTGCGGGGAAAGGTGTCCGAAGAACGGAAGGGAGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGt                                                                                                                                                                                                                                              <  1:317357/251‑1 (MQ=255)
    ccGTCTTTTGACACACTAAAAGCGCAAATCGCGCAGGATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGt                                                                                                                                                                                                                                              <  1:300552/251‑1 (MQ=255)
    ccGTCTTTTGACACACTAAAAGCGCAAATCGCGCAGGATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGt                                                                                                                                                                                                                                              <  1:845373/251‑1 (MQ=255)
     cGTCTTTTGACACACTAAAAGCGCAAATCGCGCAGGATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGtt                                                                                                                                                                                                                                             <  1:536682/251‑1 (MQ=255)
       tCTTTTGACACACTAAAAGCGCAAATCGCGCAGGATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTg                                                                                                                                                                                                                                            <  1:92440/250‑1 (MQ=255)
       tCTTTTGACACACTAAAAGCGCAAATCGCGCAGGATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTg                                                                                                                                                                                                                                            <  1:857665/250‑1 (MQ=255)
                acacTAAAAGCGCAAATCGCGCAGGATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTtgatga                                                                                                                                                                                                                                  <  1:352357/251‑1 (MQ=255)
                 cacTAAAAGCGCAAATCGCGCAGGATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTtgatga                                                                                                                                                                                                                                  <  1:781727/250‑1 (MQ=255)
                 cacTAAAAGCGCAAATCGCGCAGGATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTtgatga                                                                                                                                                                                                                                  >  1:130472/1‑250 (MQ=255)
                 cacTAAAAGCGCAAATCGCGCAGGATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTgatgat                                                                                                                                                                                                                                 >  1:465405/1‑251 (MQ=255)
                                       ggATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTtgatga                                                                                                                                                                                                                                  <  1:96790/228‑1 (MQ=255)
                                       ggATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGc                                                                                                                                                                                                                  <  1:519687/244‑1 (MQ=255)
                                       ggATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCtt                                                                                                                                                                                                           >  1:466686/1‑251 (MQ=255)
                                       ggATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCtt                                                                                                                                                                                                           >  1:839012/1‑251 (MQ=255)
                                       ggATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCtt                                                                                                                                                                                                           >  1:257529/1‑251 (MQ=255)
                                        gATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGt                                                                                                                                                                                                                                                  <  1:730660/211‑1 (MQ=255)
                                        gATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCttt                                                                                                                                                                                                          >  1:543985/1‑251 (MQ=255)
                                         aTGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGc                                                                                                                                                                                                                  <  1:73531/242‑1 (MQ=255)
                                         aTGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCtttg                                                                                                                                                                                                         >  1:457877/1‑251 (MQ=255)
                                            tgGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTGCGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCtttggtt                                                                                                                                                                                                      <  1:390705/251‑1 (MQ=255)
                                                    gCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTc                                                                                                                                                                                               >  1:23624/1‑250 (MQ=255)
                                                                                        cTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGaaaa                                                                                                                                                          >  1:27387/1‑251 (MQ=255)
                                                                                         ttCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAAt                                                                                                                                                         <  1:78791/251‑1 (MQ=255)
                                                                                         ttCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAAt                                                                                                                                                         >  1:617158/1‑251 (MQ=255)
                                                                                               tGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCTCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGAC‑AAAACGGAATTGGAAAATTATGAAt                                                                                                                                                  <  1:817734/251‑1 (MQ=255)
                                                                                                   tGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTtgatga                                                                                                                                                                                                                                  >  1:640542/1‑168 (MQ=255)
                                                                                                     cGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCACGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAgt                                                                                                                                             >  1:450893/1‑251 (MQ=255)
                                                                                                     cGGGGGAAGGTGGCCGGAGGGCGGAAGGGGGAAAGAT‑GCCCCCTAAGCCTTCGGCGGATCCCGCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTGCTTCGGCTAGACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCtttggtt                                                                                                                                                                                                      <  1:431637/194‑1 (MQ=255)
                                                                                                       ggggAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGt                                                                                                                                                                                                                                                  <  1:486232/148‑1 (MQ=255)
                                                                                                       ggggAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAgtcg                                                                                                                                           >  1:122090/1‑251 (MQ=255)
                                                                                                       ggggAAGGTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAgtc                                                                                                                                            <  1:163855/250‑1 (MQ=255)
                                                                                                             ggTGTCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTgg                                                                                                                                     >  1:849933/1‑251 (MQ=255)
                                                                                                                gtCCGAAGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCAt                                                                                                                                  >  1:458656/1‑251 (MQ=255)
                                                                                                                     aaGGACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCAc                                                                                                                              <  1:891401/250‑1 (MQ=255)
                                                                                                                       ggACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTtgat                                                                                                                                                                                                                                    >  1:51247/1‑146 (MQ=255)
                                                                                                                       ggACGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCaa                                                                                                                                                                                            <  1:217460/186‑1 (MQ=255)
                                                                                                                         aCGGAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGa                                                                                                                         <  1:296324/251‑1 (MQ=255)
                                                                                                                            gAAGGGGGCAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCaaa                                                                                                                                                                                           <  1:15809/182‑1 (MQ=255)
                                                                                                                                    cAAAAT‑CCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGAt                                                                                                               <  1:375475/250‑1 (MQ=255)
                                                                                                                                       aaatccccccTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAAtt                                                                                                                                                 <  1:137837/210‑1 (MQ=255)
                                                                                                                                         atccccccTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGa                                                                                                          <  1:593373/249‑1 (MQ=255)
                                                                                                                                         atccccccTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGa                                                                                                          <  1:628707/249‑1 (MQ=255)
                                                                                                                                             ccccTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGa                                                                                                          <  1:689213/247‑1 (MQ=255)
                                                                                                                                                    gCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTtgatga                                                                                                                                                                                                                                  <  1:242234/120‑1 (MQ=255)
                                                                                                                                                    gCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTg                                                                                               >  1:299801/1‑251 (MQ=255)
                                                                                                                                                               cTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTAc                                                                                      <  1:608589/249‑1 (MQ=255)
                                                                                                                                                                  cccccGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGcc                                                                                 <  1:642943/251‑1 (MQ=255)
                                                                                                                                                                    cccGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCgg                                                                               >  1:638484/1‑251 (MQ=255)
                                                                                                                                                                      cGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTGCTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGt                                                                                                                                                                                                                                              <  1:404700/90‑1 (MQ=255)
                                                                                                                                                                                     cAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTGATGTAacac                                                              <  1:755274/251‑1 (MQ=255)
                                                                                                                                                                                     cAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTGATGTAacac                                                              <  1:108890/251‑1 (MQ=255)
                                                                                                                                                                                       aaaaaaTAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTGATGTAACACAt                                                            <  1:231245/251‑1 (MQ=255)
                                                                                                                                                                                          aaaTAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTTGGGGTGATGt                                                                   >  1:623482/1‑241 (MQ=255)
                                                                                                                                                                                            aTAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTGATGTAACACATAGccc                                                       <  1:747369/251‑1 (MQ=255)
                                                                                                                                                                                               ggaaggaGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTGATGTAACACATAGCCcaca                                                    >  1:823892/1‑251 (MQ=255)
                                                                                                                                                                                                 aaggaGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTGATGTAACACATAGCCCacaac                                                  <  1:219054/251‑1 (MQ=255)
                                                                                                                                                                                                      ggCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTGATGTAACACATAGCCCACAACAAGTg                                             >  1:61676/1‑251 (MQ=255)
                                                                                                                                                                                                       gctcggTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTGATGTAACACATAGCCCACAACAAGTg                                             <  1:395457/246‑1 (MQ=255)
                                                                                                                                                                                                          tGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGaa                                                                                                                                                            <  1:207536/136‑1 (MQ=255)
                                                                                                                                                                                                          tGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTGATGTAACACATAGCCCACAACAAGTGGCtt                                         >  1:272605/1‑251 (MQ=255)
                                                                                                                                                                                                           ggTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTGATGTAACACATAGCCCACAACAAGTGGCTTa                                        >  1:847124/1‑251 (MQ=255)
                                                                                                                                                                                                                gACTACTTCGGCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTg                                                                                               <  1:621031/191‑1 (MQ=255)
                                                                                                                                                                                                                         ggCTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTGATGTAACACATAGCCCacaac                                                  >  1:212387/1‑227 (MQ=255)
                                                                                                                                                                                                                           cTAAACATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTGATGTAACACATAGCCCACAACAAGTGGCTTAAAAtaaatttaaatt                         <  1:496358/250‑1 (MQ=255)
                                                                                                                                                                                                                                cATGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTg                                                                       <  1:168273/199‑1 (MQ=255)
                                                                                                                                                                                                                                 aTGTACGTTTTGATGAAAACACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTGATGTAACACATAGCCCACAACAAGTGGCTTAAAATAAATTTAAATTTTTacac                  <  1:515865/251‑1 (MQ=255)
                                                                                                                                                                                                                                                aaaaCACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGATAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTGATGTAACACATAGCCCACAACAAGTGGCTTAAAATAAATTTAAATTTTTACACAAAACTGGAATAGaa   <  1:441322/251‑1 (MQ=255)
                                                                                                                                                                                                                                                 aaaCACAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTGATGTAACACATAGCCCACAACAAGTGGCTTAAAATAAATTTAAATTTTTACACAAAACTGGAATAGaaa  <  1:513412/251‑1 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                     
ATTTCCGTCTTTTGACACACTAAAAGCGCAAATCGCGCAGGATGTGGAGACGGCGAAAAAGGTTTTTGAAGCGTAGAAAAATTTTTGCCTTCCCCTGCTTGCGGGGGAAGGTGTCCGAAGGACGGAAGGGGGCAAAATCCCCCCCTCAGCCTTCGGCAGCTCCCCCCGTAAACGGAGGGAGCAAAAAAATAGGAAGGAGGCTTGGTATGACTACTTCGGCTAAACATGTACGTTTTGATGAAAACAGAATGTAGGTTGAGCTTGATGATGCGCGTATTTTAGGCATTCCTTTGGTTTGGTTTCCAAAATTGCTGCGGGCGACAAAAACGGAATTGGAAAATTATGAATTAAGTCGTCGTGGCATTCACTGGGATGCATTGGATGAAGATATTTCAATTGATGGATTACTTGCCGGTCGGGGTGATGTAACACATAACCCACAACAAGTGGCTTAAAATAAATTTAAATTTTTACACAAAACTGGAATAGAAA  >  1/2076556‑2077047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑