Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 2,074,427 A→C E126D (GAA→GAC)  unknown → Peptidoglycan lipid II flippase MurJ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*12,074,4270AC100.0% 213.1 / NA 74E126D (GAA→GAC) unknownPeptidoglycan lipid II flippase MurJ
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (36/38);  total (36/38)

CAATCGCATTCCGAATTTCCTCCGCCGCTTGTTTGCCGAAGGGGCGTTTTCACAAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGAAGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTCAATGTGGCGATGATTGCTACCGCACTTTGGTTGGCGCCGCAGCTGAAAAATCCTGATTTAGGCTTGGCAATCGGGATCTTTCTCGGCGGC  >  1/2074187‑2074667
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                
cAATCGCATTCCGAATTTCCTCCGCCGCTTGTTTGCCGAAGGGGCGTTTTCACAAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAAcg                                                                                                                                                                                                                                        <  1:31652/251‑1 (MQ=255)
cAATCGCATTCCGAATTTCCTCCGCCGCTTGTTTGCCGAAGGGGCGTTTTCACAAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAAcg                                                                                                                                                                                                                                        <  1:510456/251‑1 (MQ=255)
      cATTCCGAATTTCCTCCGCCGCTTGTTTGCCGAAGGGGCGTTTTCACAAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGaaa                                                                                                                                                                                                                                  <  1:659922/251‑1 (MQ=255)
          ccGAATTTCCTCCGCCGCTTGTTTGCCGAAGGGGCGTTTTCACAAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAAtt                                                                                                                                                                                                                              >  1:221379/1‑251 (MQ=255)
            gAATTTCCTCCGCCGCTTGTTTGCCGAAGGGGCGTTTTCACAAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCa                                                                                                                                                                                                                            >  1:607526/1‑251 (MQ=255)
                ttCCTCCGCCGCTTGTTTGCCGAAGGGGCGTTTTCACAAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCa                                                                                                                                                                                                                        >  1:769824/1‑251 (MQ=255)
                         cgcTTGTTTGCCGAAGGGGCGTTTTCACAAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCgtt                                                                                                                                                                                                               <  1:271291/251‑1 (MQ=255)
                           cTTGTTTGCCGAAGGGGCGTTTTCACAAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCgttgt                                                                                                                                                                                                             <  1:319446/251‑1 (MQ=255)
                             tGTTTGCCGAAGGGGCGTTTTCACAAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGttgttg                                                                                                                                                                                                           >  1:6941/1‑251 (MQ=255)
                                  gCCGAAGGGGCGTTTTCACAAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCaa                                                                                                                                                                                                      >  1:728190/1‑251 (MQ=255)
                                   ccGAAGGGGCGTTTTCACAAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGAACTTTGGGTGGGCTGGTTACCATCGCCACTTTGCTGGCGATGATCGGATCGCCCGCCGCGGCGGCGATTTTCGGCACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCaaa                                                                                                                                                                                                     >  1:599797/1‑251 (MQ=255)
                                        ggggCGTTTTCACAAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCa                                                                                                                                                                                                 >  1:119471/1‑250 (MQ=255)
                                         gggCGTTTTCACAAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCAc                                                                                                                                                                                                <  1:186803/250‑1 (MQ=255)
                                               tttCACAAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCt                                                                                                                                                                                         <  1:214103/251‑1 (MQ=255)
                                                 tCACAAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCtta                                                                                                                                                                                       >  1:243323/1‑251 (MQ=255)
                                                    caAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCttattt                                                                                                                                                                                    <  1:383822/251‑1 (MQ=255)
                                                    caAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCttattt                                                                                                                                                                                    <  1:279070/251‑1 (MQ=255)
                                                        ccTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTc                                                                                                                                                                                                                                              <  1:19543/189‑1 (MQ=255)
                                                        ccTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCttatttat                                                                                                                                                                                  <  1:134468/249‑1 (MQ=255)
                                                        ccTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATgg                                                                                                                                                                                <  1:487784/251‑1 (MQ=255)
                                                        ccTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATgg                                                                                                                                                                                <  1:675151/251‑1 (MQ=255)
                                                           tCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGtt                                                                                                                                                                              >  1:684071/1‑250 (MQ=255)
                                                             gTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGt                                                                                                                                                                           >  1:274800/1‑251 (MQ=255)
                                                             gTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGt                                                                                                                                                                           >  1:422906/1‑251 (MQ=255)
                                                                ccTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAGAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTGGGGTGGGTTGGTTGCCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGAc                                                                                                                                                                        <  1:865285/251‑1 (MQ=255)
                                                                 cTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGAcc                                                                                                                                                                       <  1:801627/251‑1 (MQ=255)
                                                                  tgtgTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCtt                                                                                                                                                                                        <  1:189701/233‑1 (MQ=255)
                                                                   gtgtTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCtt                                                                                                                                                                     >  1:661280/1‑251 (MQ=255)
                                                                   gtgtTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCtt                                                                                                                                                                     >  1:145326/1‑251 (MQ=255)
                                                                         gCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTgg                                                                                                                                                                <  1:695685/250‑1 (MQ=255)
                                                                            gAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGgcg                                                                                                                                                              >  1:662922/1‑249 (MQ=255)
                                                                            gAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGgcg                                                                                                                                                              >  1:484206/1‑249 (MQ=255)
                                                                             aaTATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTg                                                                                                                                                           <  1:782146/251‑1 (MQ=255)
                                                                              atatCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGgcg                                                                                                                                                              >  1:344328/1‑247 (MQ=255)
                                                                               tatCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGgcg                                                                                                                                                              >  1:765736/1‑246 (MQ=255)
                                                                                atCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGAc                                                                                                                                                                        <  1:386214/235‑1 (MQ=255)
                                                                                 tCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTcc                                                                                                                                                        <  1:138068/250‑1 (MQ=255)
                                                                                       aTCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGcgcg                                                                                                                                                  >  1:610613/1‑250 (MQ=255)
                                                                                                   aTCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCACCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACAcc                                                                                                                                      >  1:369381/1‑250 (MQ=255)
                                                                                                    tCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACAcc                                                                                                                                      >  1:295975/1‑249 (MQ=255)
                                                                                                         aaCCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTa                                                                                                                               <  1:306516/251‑1 (MQ=255)
                                                                                                         aaCCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTa                                                                                                                               <  1:49856/251‑1 (MQ=255)
                                                                                                               cgAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTc                                                                                                                          <  1:160291/250‑1 (MQ=255)
                                                                                                                   tttATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAg                                                                                                                             >  1:236711/1‑243 (MQ=255)
                                                                                                                   tttATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGt                                                                                                                     <  1:830891/251‑1 (MQ=255)
                                                                                                                   accggtgagatggTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGt                                                                                                                     <  1:23409/240‑1 (MQ=255)
                                                                                                                           cAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTcc                                                                                                              <  1:887738/250‑1 (MQ=255)
                                                                                                                                   ccGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGc                                                                                                       >  1:226851/1‑249 (MQ=255)
                                                                                                                                            tgggtgggTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTc                                                                                            <  1:15318/251‑1 (MQ=255)
                                                                                                                                                tgggtTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTCAAt                                                                                         <  1:778686/250‑1 (MQ=255)
                                                                                                                                                  ggttggttACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTCAAtgt                                                                                       <  1:372460/250‑1 (MQ=255)
                                                                                                                                                  ggttggttACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTCAAtgt                                                                                       <  1:548879/250‑1 (MQ=255)
                                                                                                                                                   gttggttACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTa                                                                                                                               <  1:319638/209‑1 (MQ=255)
                                                                                                                                                      ggttACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCttattt                                                                                                                                                                                    <  1:426855/153‑1 (MQ=255)
                                                                                                                                                      ggttACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATgg                                                                                                                                                                                >  1:217170/1‑157 (MQ=255)
                                                                                                                                                       gttACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTCAATGTAGCga                                                                                  <  1:688995/250‑1 (MQ=255)
                                                                                                                                                             aTCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTCAATGTAGCGATGATTg                                                                            >  1:568429/1‑250 (MQ=255)
                                                                                                                                                                                tgatCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTCAATGTAGCga                                                                                  >  1:794950/1‑225 (MQ=255)
                                                                                                                                                                                   tcggatcgCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTCAAtgt                                                                                       >  1:882871/1‑217 (MQ=255)
                                                                                                                                                                                                            tttCGGGACGGGCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTCAATGTAGCGATGATTGCTACCGCACTttggt                                                             >  1:129776/1‑218 (MQ=255)
                                                                                                                                                                                                                     gggCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTCAATGTAGCGATGATTGCTACCGCACTTTGGTTGGCGCCGCAGCTGAAAAATCCTGATTTAGGCTTGGCAATCg                   >  1:568007/1‑251 (MQ=255)
                                                                                                                                                                                                                     gggCTGGTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTATGCTGCTCAATGTAGCGATGATTGCTACCGCACTTTGGTTGGCGCCGCAGCTGAAAAATCCTGATTTAGGCTTGGCAATCg                   >  1:446457/1‑251 (MQ=255)
                                                                                                                                                                                                                          ggTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCttattta                                                                                                                                                                                   >  1:787340/1‑86 (MQ=255)
                                                                                                                                                                                                                          ggTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATgg                                                                                                                                                                                >  1:745451/1‑89 (MQ=255)
                                                                                                                                                                                                                          ggTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGAcc                                                                                                                                                                       >  1:793530/1‑98 (MQ=255)
                                                                                                                                                                                                                          ggTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGAcc                                                                                                                                                                       <  1:689359/98‑1 (MQ=255)
                                                                                                                                                                                                                          ggTTTGTGGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTCAATGTAGCGATGATTGCTAc                                                                        <  1:151325/193‑1 (MQ=255)
                                                                                                                                                                                                                              tgtgGATTGGCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTCAATGTAGCGATGATTGCTACCGCACTTTGGTTGGCGCCGCAGCTGAAAAATCCTGATTTAGGCTTGGCAATCGGGATCTTtc          <  1:638131/251‑1 (MQ=255)
                                                                                                                                                                                                                                      ggCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTCAATGTAGCGATGATTGCTACCGCACTTTGGTTGGCGCCGCAGCTGAAAAATCCTGATTTAGGCTTGGCAATCGGGATCTTTCTcggcgg   >  1:158602/1‑250 (MQ=255)
                                                                                                                                                                                                                                      ggCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTCAATGTAGCGATGATTGCTACCGCACTTTGGTTGGCGCCGCAGCTGAAAAATCCTGATTTAGGCTTGGCAATCGGGATCTTTCTcggcgg   >  1:848509/1‑250 (MQ=255)
                                                                                                                                                                                                                                       gCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATgg                                                                                                                                                                                >  1:464529/1‑76 (MQ=255)
                                                                                                                                                                                                                                       gCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTc                                                                                            <  1:12289/160‑1 (MQ=255)
                                                                                                                                                                                                                                       gCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTCAATGTAGCGATGATTGCTACCGCACTTTGGTTGGCGCCGCAGCTGAAAAATCCTGATTTAGGCTTGGCAATCGGGATCTTTCTcggcgg   >  1:2588/1‑249 (MQ=255)
                                                                                                                                                                                                                                       gCTTAATGACGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTCAATGTAGCGATGATTGCTACCGCACTTTGGTTGGCGCCGCAGCTGAAAAATCCTGATTTAGGCTTGGCAATCGGGATCTTTCTCggcggc  <  1:468631/250‑1 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                
CAATCGCATTCCGAATTTCCTCCGCCGCTTGTTTGCCGAAGGGGCGTTTTCACAAGCCTTCGTGCCTGTGTTGGCGGAATATCAGAAATCCGGCGATTTATCCAAAACCCGCGAATTTATCGGCAAGGTTTCCGGTACTTTGGGTGGGTTGGTTACCATCGTCACTTTGCTGGCGATGATCGGATCGCCCGTCGTGGCGGCGATTTTCGGGACGGGCTGGTTTGTGGATTGGCTTAATGAAGGTCCTAACGCGGAAAAATTCACCCAAGCCTCGTTGTTGCTCAAAATCACCTTCCCTTATTTATGGTTCGTGACCTTTGTGGCGCTGTCCGGCGCGATTTTAAACACCCTCGGTAAGTTCGGCGTCATGTCCTTTTCGCCTGTGCTGCTCAATGTGGCGATGATTGCTACCGCACTTTGGTTGGCGCCGCAGCTGAAAAATCCTGATTTAGGCTTGGCAATCGGGATCTTTCTCGGCGGC  >  1/2074187‑2074667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑