| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 2,047,356 | T→C | H11R (CAC→CGC) | unknown ← | LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc‑independent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 2,047,356 | 0 | T | C | 100.0% | 117.1 / NA | 41 | H11R (CAC→CGC) | unknown | LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc‑independent |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (20/21); total (20/21) | |||||||||||
TGAGGATTCCTTATTTTGATTTAAATGCACTGAATTTGCCGTAACGGTTGGCGAAATCACTGGCGCGCCCTTCGTTGACAACCTGTCTGGTTTTACCGGTGTAAAACGGATGTGAAGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGTGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAACTTATTTTAAAATAAAAAATAAGATACCGAAAAAAGTAACAACTTAGATTGGGGTAATAAGAAAAATCATGTAATGTACGAAAAATCCACCGAGTTAGTTCTCATAGAAAAACAACTTTATTTTTGAC > 1/2047111‑2047590 | tGAGGATTCCTTATTTTGATTTAAATGCACTGAATTTGCCGTAACGGTTGGCGAAATCACTGGCGCGCCCTTCGTTGACAACCTGTCTGGTTTTACCGGTGTAAAACGGATGTGAAGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATaa < 1:474464/251‑1 (MQ=255) aGGATTCCTTATTTTGATTTAAATGCACTGAATTTGCCGTAACGGTTGGCGAAATCACTGGCGCGCCCTTCGTTGACAACCTGTCTGGTTTTACCGGTGTAAAACGGATGTGAAGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAAt < 1:579900/250‑1 (MQ=255) tCCTTATTTTGATTTAAATGCACTGAATTTGCCGTAACGGTTGGCGAAATCACTGGCGCGCCCTTCGTTGACAACCTGTCTGGTTTTACCGGTGTAAAACGGATGTGAAGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCg > 1:434844/1‑251 (MQ=255) gCACTGAATTTGCCGTAACGGTTGGCGAAATCACTGGCGCGCCCTTCGTTGACAACCTGTCTGGTTTTACCGGTGTAAAACGGATGTGAAGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCAt > 1:68609/1‑251 (MQ=255) gTTGGCGAAATCACTGGCGCGCCCTTCGTTGACAACCTGTCTGGTTTTACCGGTGTAAAACGGATGTGAAGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTAttt < 1:299496/250‑1 (MQ=255) ttGACAACCTGTCTGGTTTTACCGGTGTAAAACGGATGTGAAGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCAt > 1:17218/1‑250 (MQ=255) cAACCTGTCTGGTTTTACCGGTGTAAAACGGATGTGAAGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTac < 1:731787/251‑1 (MQ=255) aaCCTGTCTGGTTTTACCGGTGTAAAACGGATGTGAAGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATcc < 1:875683/211‑1 (MQ=255) tCTGGTTTTACCGGTGTAAAACGGATGTGAAGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACaaaaa < 1:276996/251‑1 (MQ=255) ggTTTTACCGGTGTAAAACGGATGTGAAGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTacac > 1:770516/1‑243 (MQ=255) ggTTTTACCGGTGTAAAACGGATGTGAAGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGAGGATCTGGCGCAGGAACGAATCAAAAAGCCTCGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAAt > 1:175112/1‑251 (MQ=255) aCCGGTGTAAAACGGATGTGAAGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAg < 1:502145/251‑1 (MQ=255) ccGGTGTAAAACGGATGTGAAGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGa < 1:180698/251‑1 (MQ=255) gtgtAAAACGGATGTGAAGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATaa > 1:299603/1‑153 (MQ=255) aaaaCGGATGTGAAGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAAc < 1:210862/251‑1 (MQ=255) aaGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATg > 1:279544/1‑202 (MQ=255) gTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTacac < 1:190628/206‑1 (MQ=255) cacaTAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAaataataa < 1:827768/183‑1 (MQ=255) caTAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGAt > 1:146988/1‑128 (MQ=255) caTAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGa < 1:288221/213‑1 (MQ=255) aGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAACTTAttt > 1:229913/1‑221 (MQ=255) gACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAACTTATTTTAAAATAAAAAATAAGATGCCGAAAAAAGTa > 1:126847/1‑251 (MQ=255) ccGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAACTTATTTTAAAATAAAAAATAAGATGCCGAAAAAAGTaac < 1:734108/251‑1 (MQ=255) atTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCATAAAAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAACTTATTTTAAAATAAAAAATAAGATGCCGAAAAAAGTaacaa > 1:775488/1‑249 (MQ=255) ttCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATg > 1:600356/1‑168 (MQ=255) ttttCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAACTTATTTTAAAATAAAAAATAAGATGCCGAAAAAAGTAACAACTTAGAtt < 1:876671/251‑1 (MQ=255) ttttCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAACTTATTTTAAAATAAAAAATAAGATGCCGAAAAAAGTAACAACTTAGAtt < 1:157456/251‑1 (MQ=255) cATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAACTTATTTTAAAATAAAAAATAAGATGCCGAAAAAAGTAACAACTTAGATTGGGGt < 1:575704/251‑1 (MQ=255) aTTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAGAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAACTTAtttt > 1:866894/1‑195 (MQ=255) ttCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCtt > 1:79750/1‑103 (MQ=255) ttCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAACTTATTTTAAAATAAAAAATAAGATGCCGAAAAAAGTAACAACTTAGATTGGGGTAATAAGaaaaa > 1:107050/1‑251 (MQ=255) tCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAACTTATTTTAAAATAAAAAATAAGATGCCGAAAAAAGTAACAACTTAGATTGGGGTAATAAGAAAAAt > 1:862637/1‑251 (MQ=255) gtTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTacac > 1:414899/1‑156 (MQ=255) ttCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAACTTATTTTAAAATAAAAAATAAGATGCCGAAAAAAGTAACAACTTAGATTGGGGTAATAAGAAAAATCATGTAATGTACGaa < 1:23222/251‑1 (MQ=255) gTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAAc > 1:261936/1‑140 (MQ=255) gCATTGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAACTTATTTTAAAATAAAAAATAAGATGCCGAAAAAAGTAACAACTTAGATTGGGGTAATAAGAAAAATCATGTAATGTACGAAAAATCCACCGAGTTAGTTCTCATAGAAAaacaa > 1:789829/1‑249 (MQ=255) gCATGGGAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAACTTATTTTAAAATAAAAAATAAGATGCCGAAAAAAGTaac < 1:427045/174‑1 (MQ=255) gAGTCAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAaataataa > 1:522771/1‑90 (MQ=255) cAT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAACTTATTTTAAAATAAAAAATAAGATGCCGAAAAAAGTAACAACTTAGATTGGGGTAATAAGAAAAATCatgtaa < 1:61608/198‑1 (MQ=255) aT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCTATCTTACACAAAAAAATCCATAGAAGCAAACTTATTTTAAAATAAAAAATAAGATGCCGAAAAAAGTAACAACTTAGATTGGGGTAATAAGAAAAATCATGTAATGTACGAAAAATCCACCGAGTTAGTTCTCATAGAAAAACAACTTTATTTTTGAc < 1:516531/251‑1 (MQ=255) aT‑‑AAAAAAGAACGGTGCGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTacac < 1:20428/102‑1 (MQ=255) | TGAGGATTCCTTATTTTGATTTAAATGCACTGAATTTGCCGTAACGGTTGGCGAAATCACTGGCGCGCCCTTCGTTGACAACCTGTCTGGTTTTACCGGTGTAAAACGGATGTGAAGCTGAAGATGTATCACACATAAAGACCGGATATTCTTTTCCATCTTCCCATTTCATAGTGTTGGTGGTTCTGGCGCAGGAACGAATCAAAAAGCCTTGTTTGGCATTGGAGTCAT‑‑AAAAAAGAACGGTGTGATAATTTTCCGGATGAATACCTTTTTTCATTTTTCTGCAATCCTTATTTTTTAGTGAAAAATAATAATGCGCGCCATCTTACACAAAAAAATCCATAGAAGCAAACTTATTTTAAAATAAAAAATAAGATACCGAAAAAAGTAACAACTTAGATTGGGGTAATAAGAAAAATCATGTAATGTACGAAAAATCCACCGAGTTAGTTCTCATAGAAAAACAACTTTATTTTTGAC > 1/2047111‑2047590 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |