Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 2,006,221 C→T S101N (AGC→AAC)  unknown ← Tol biopolymer transport system, TolR protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*12,006,2210CT100.0% 180.5 / NA 63S101N (AGC→AAC) unknownTol biopolymer transport system, TolR protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (38/25);  total (38/25)

ATATTATGGTAGAGCGAGCTTAAAATTAACAATCCGAACAACGCTAAGTGCATTATGATGGAAATCACAACTGCATCAACATCACCTTTTTGTCGCTTATTCTGCACAATGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGCTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACTAATAATTGGCGCAGTAGCCATAAAAATTAAAACCAATACTAAAAGCACGTCCAAAA  >  1/2005977‑2006467
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                      
atatTATGGTAGAGCGAGCTTAAAATTAACAATCCGAACAACGCTAAGTGCATTATGATGGAAATCACAACTGCATCAACATCACCTTTTTGTCGCTTATTCTGCACAATGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCtt                                                                                                                                                                                                                                                  >  1:298722/1‑251 (MQ=255)
 tattatGGTAGAGCGAGCTTAAAATTAACAATCCGAACAACGCTAAGTGCATTATGATGGAAATCACAACTGCATCAACATCACCTTTTTGTCGCTTATTCTGCACAATGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCttt                                                                                                                                                                                                                                                 <  1:832002/251‑1 (MQ=255)
     atGGTAGAGCGAGCTTAAAATTAACAATCCGAACAACGCTAAGTGCATTATGACGGAAATCACAACTGCATCAACATCACCTTTTTGTCGCTTATTCTGCACAATGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCa                                                                                                                                                                                                                                             >  1:811323/1‑251 (MQ=255)
      tGGTAGAGCGAGCTTAAAATTAACAATCCGAACAACGCTAAGTGCATTATGATGGAAATCACAACTGCATCAACATCACCTTTTTGTCGCTTATTCTGCACAATGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCaa                                                                                                                                                                                                                                            >  1:477554/1‑251 (MQ=255)
                         ttAACAATCCGAACAACGCTAAGTGCATTATGATGGAAATCACAACTGCATCAACATCACCTTTTTGTCGCTTATTCTGCACAATGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTg                                                                                                                                                                                                                         <  1:316492/251‑1 (MQ=255)
                                                 gCATTATGATGGAAATCACAACTGCATCAACATCACCTTTTTGTCGCTTATTCTGCACAATGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTggg                                                                                                                                                                                                                       >  1:99628/1‑229 (MQ=255)
                                                         atgGAAATCACAACTGCATCAACATCACCTTTTTGTCGCTTATTCTGCACAATGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATTAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTAc                                                                                                                                                                                         <  1:578640/251‑1 (MQ=255)
                                                         atgGAAATCACAACTGCATCAACATCACCTTTTTGTCGCTTATTCTGCACAATGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGAttt                                                                                                                                                                                                >  1:683320/1‑244 (MQ=255)
                                                                 cacaACTGCATCAACATCACCTTTTTGTCGCTTATTCTGCACAATGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTgccg                                                                                                                                                                                 >  1:497583/1‑251 (MQ=255)
                                                                  acaACTGCATCAACATCACCTTTTTGTCGCTTATTCTGCACAATGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTgccgc                                                                                                                                                                                <  1:364393/251‑1 (MQ=255)
                                                                   caACTGCATCAACATCACCTTTTTGTCGCTTATTCTGCACAATGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCttt                                                                                                                                                                                                                                                 >  1:491/1‑185 (MQ=255)
                                                                            cAACATCACCTTTTTGTCGCTTATTCTGCACAATGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAAt                                                                                                                                                                      <  1:826549/251‑1 (MQ=255)
                                                                                           gTCGCTTATTCTGCACAATGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGAt                                                                                                                                                       >  1:333448/1‑251 (MQ=255)
                                                                                                  aTTCTGCACAATGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTg                                                                                                                                                                                                                         <  1:326928/178‑1 (MQ=255)
                                                                                                            aTGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCAt                                                                                                                                                                                                                >  1:211075/1‑177 (MQ=255)
                                                                                                            aTGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTaaaa                                                                                                                                      >  1:600833/1‑251 (MQ=255)
                                                                                                            aTGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTaaaa                                                                                                                                      <  1:355341/251‑1 (MQ=255)
                                                                                                            aTGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATCGAGTGCTTTAATGACCTCTTCATAAGGCACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTaaaa                                                                                                                                      >  1:39588/1‑251 (MQ=255)
                                                                                                                        taattaaATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGttt                                                                                                                          <  1:388866/251‑1 (MQ=255)
                                                                                                                          attaaATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACggg                                                                                                                                                                                      <  1:339558/189‑1 (MQ=255)
                                                                                                                          attaaATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTg                                                                                                                        >  1:113161/1‑251 (MQ=255)
                                                                                                                             aaaTTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGt                                                                                                                       >  1:601457/1‑249 (MQ=255)
                                                                                                                                   ggTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGt                                                                                                                <  1:825362/250‑1 (MQ=255)
                                                                                                                                   ggTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTa                                                                                                               >  1:704007/1‑251 (MQ=255)
                                                                                                                                        gTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCt                                                                                                                                                                                                                                                   <  1:316855/114‑1 (MQ=255)
                                                                                                                                         tCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACa                                                                                                         >  1:763177/1‑251 (MQ=255)
                                                                                                                                         tCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACa                                                                                                         <  1:531064/251‑1 (MQ=255)
                                                                                                                                          cATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACAt                                                                                                        >  1:185099/1‑251 (MQ=255)
                                                                                                                                                aCCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGAc                                                                                                  <  1:891811/251‑1 (MQ=255)
                                                                                                                                                                 cGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCGCCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGc                                                                                 <  1:375686/251‑1 (MQ=255)
                                                                                                                                                                 cGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACGCTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGc                                                                                 <  1:493430/251‑1 (MQ=255)
                                                                                                                                                                              cAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTc                                                                      <  1:584969/249‑1 (MQ=255)
                                                                                                                                                                                        gCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGt                                                                                                                                                                                                                      >  1:136034/1‑95 (MQ=255)
                                                                                                                                                                                        gCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCtt                                                               >  1:104482/1‑246 (MQ=255)
                                                                                                                                                                                             aaTGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACtaataa                                                     <  1:580173/251‑1 (MQ=255)
                                                                                                                                                                                                  ccTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACtaataa                                                     >  1:726628/1‑246 (MQ=255)
                                                                                                                                                                                                    tctTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACTAATAATTGgcgc                                              <  1:616251/251‑1 (MQ=255)
                                                                                                                                                                                                     ctTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTc                                                                                                                   >  1:266616/1‑181 (MQ=255)
                                                                                                                                                                                                     ctTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACTAATAATTGgcgc                                              >  1:365410/1‑250 (MQ=255)
                                                                                                                                                                                                     ctTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACTAATAATTGGCGCa                                             >  1:545228/1‑251 (MQ=255)
                                                                                                                                                                                                       tCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCttt                                                                                                                                                                                                                                                 >  1:42936/1‑53 (MQ=255)
                                                                                                                                                                                                       tCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCtt                                                               >  1:750757/1‑231 (MQ=255)
                                                                                                                                                                                                       tCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACTAATAATTGGCGCAGt                                           >  1:486954/1‑251 (MQ=255)
                                                                                                                                                                                                            aGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACtaataa                                                     >  1:867648/1‑236 (MQ=255)
                                                                                                                                                                                                            aGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACtaataa                                                     <  1:711662/236‑1 (MQ=255)
                                                                                                                                                                                                                                  aCTAAGAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACAttt                                                                                                      <  1:421839/165‑1 (MQ=255)
                                                                                                                                                                                                                                       gAACATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGaaa                                                                                                           <  1:803212/155‑1 (MQ=255)
                                                                                                                                                                                                                                         aCATTGTATCGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGc                                                                                 <  1:423166/179‑1 (MQ=255)
                                                                                                                                                                                                                                          cATTGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACTAATAATTGGCGCAGTAGCCATAAAAATTAAAACCAATACTa                 <  1:510593/242‑1 (MQ=255)
                                                                                                                                                                                                                                           attgtattgtTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTaaaa                                                                                                                                      >  1:344291/1‑124 (MQ=255)
                                                                                                                                                                                                                                            ttGTATTGTTATCTTTATCAAATTCTTGTTTTGATTGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGAGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACTAATAATTGGCGCAGTAGCCATAAAAATTAAAACCAATACTAAAAGCACGTc       >  1:566963/1‑250 (MQ=255)
                                                                                                                                                                                                                                            ttGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGaaa                                                                                                           >  1:289161/1‑150 (MQ=255)
                                                                                                                                                                                                                                            ttGTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACTAATAATTGGCGCAGTAGCCATAAAAATTAAAACCAATACTAAAAGCACGTc       >  1:645410/1‑250 (MQ=255)
                                                                                                                                                                                                                                              gTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTc                                                                                                                      <  1:2239/137‑1 (MQ=255)
                                                                                                                                                                                                                                              gTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGc                                                                                 >  1:604917/1‑174 (MQ=255)
                                                                                                                                                                                                                                              gTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACTAATAATTGGCGCAGTAGCCATAAAAATTAAAACCAATAc                   >  1:293825/1‑236 (MQ=255)
                                                                                                                                                                                                                                              gTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACTAATAATTGGCGCAGTAGCCATAAAAATTAAAACCAATACTAAAAGCACGTCCaa    >  1:192123/1‑251 (MQ=255)
                                                                                                                                                                                                                                              gTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACTAATAATTGGCGCAGTAGCCATAAAAATTAAAACCAATACTAAAAGCACGTCCaa    >  1:866633/1‑251 (MQ=255)
                                                                                                                                                                                                                                              gTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACTAATAATTGGCGCAGTAGCCATAAAAATTAAAACCAATACTAAAAGCACGTCCaa    >  1:428645/1‑251 (MQ=255)
                                                                                                                                                                                                                                              gTATTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACTAATAATTGGCGCAGTAGCCATAAAAATTAAAACCAATACTAAAAGCACGTCCaa    >  1:327235/1‑251 (MQ=255)
                                                                                                                                                                                                                                                aTTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACg                                                                                                                                                                                        >  1:853752/1‑69 (MQ=255)
                                                                                                                                                                                                                                                aTTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACTAATAATTGGCGCAGTAGCCATAAAAATTAAAACCAATACTAAAAGc            >  1:383904/1‑241 (MQ=255)
                                                                                                                                                                                                                                                aTTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACTAATAATTGGCGCAGTAGCCATAAAAATTAAAACCAATACTAAAAGCACGTCCaaaa  >  1:813287/1‑251 (MQ=255)
                                                                                                                                                                                                                                                aTTGTTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACTAATAATTGGCGCAGTAGCCATAAAAATTAAAACCAATACTAAAAGCACGTCCaaaa  <  1:806463/251‑1 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                      
ATATTATGGTAGAGCGAGCTTAAAATTAACAATCCGAACAACGCTAAGTGCATTATGATGGAAATCACAACTGCATCAACATCACCTTTTTGTCGCTTATTCTGCACAATGTTACCTATTTAATTAAATTGGGTTTGTCATTAAACCAACGGATTTGATGCCGGCAAGATGAAGCAAATTGAGTGCTTTAATGACCTCTTCATAAGGTACTTCTTTGGCACCGCCGACTAAGAACATTGTATTGCTATCTTTATCAAATTCTTGTTTTGATAGTTGGGTAACCATCTCTTCGGTAAGATTTTCCGTACGGGTGCCGCCGATTGAAATGGCGTACTGACCGATTCCCGACACTTCTAAAATCACCGGTGTTTTGTCTTCCGTAGAAACATTTTGACTTTGAACCGCATCCGGCAGTTCAACTTCTACGCTTTGACTAATAATTGGCGCAGTAGCCATAAAAATTAAAACCAATACTAAAAGCACGTCCAAAA  >  1/2005977‑2006467

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑