Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	54,904	A→C	N111H (AAT→CAT)	unknown →	FIG00904084: hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	54,904	0	A	C	100.0%	211.5 / NA	71	N111H (AAT→CAT)	unknown	FIG00904084: hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (38/33);  total (38/33)

CATTAACGAAGACAATCCCGGCGTTGCCGATGTGGAAGTGAAAGTAGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAAAATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAATTAAAGTGCGGTCATTTTTTTCGGTGTTTTTCAGATGGCGCTACTTTTTAAACTTGCGCCATATTTTGTCTTCCTGTCC  >  1/54657‑55145                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                  caTTAACGAAGACAATCCCGGCGTTGCCGATGTGGAAGTGAAAGTAGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACAtt                                                                                                                                                                                                                                                >  1:536283/1‑251 (MQ=255) caTTAACGAAGACAATCCCGGCGTTGCCGATGTGGAAGTGAAAGTAGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGGTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACAtt                                                                                                                                                                                                                                                >  1:552584/1‑251 (MQ=255)   ttAACGAAGACAATCCCGGCGTTGCCGATGTGGAAGTGAAAGTAGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTAc                                                                                                                                                                                                                                              <  1:346539/251‑1 (MQ=255)     aaCGAAGACAATCCCGGCGTTGCCGATGTGGAAGTGAAAGTAGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCg                                                                                                                                                                                                                                            >  1:472889/1‑251 (MQ=255)            aCAATCCCGGCGTTGCCGATGTGGAAGTGAAAGTAGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATgg                                                                                                                                                                                                                                      <  1:98319/250‑1 (MQ=255)                      cGTTGCCGATGTGGAAGTGAAAGTAGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATac                                                                                                                                                                                                                            <  1:815533/250‑1 (MQ=255)                      cGTTGCCGATGTGGAAGTGAAAGTAGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATac                                                                                                                                                                                                                            <  1:475393/250‑1 (MQ=255)                      cGTTGCCGATGTGGAAGTGAAAGTAGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAACATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATac                                                                                                                                                                                                                            <  1:210139/250‑1 (MQ=255)                        ttGCCGATGTGGAAGTGAAAGTAGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATacac                                                                                                                                                                                                                          <  1:741572/250‑1 (MQ=255)                               tgtgGAAGTGAAAGTAGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCg                                                                                                                                                                                                                  <  1:798187/251‑1 (MQ=255)                                gtgGAAGTGAAAGTAGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGt                                                                                                                                                                                                                 >  1:232607/1‑251 (MQ=255)                                   gAAGTGAAAGTAGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATac                                                                                                                                                                                                                            <  1:428950/237‑1 (MQ=255)                                   gAAGTGAAAGTAGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTAt                                                                                                                                                                                                                    <  1:682735/245‑1 (MQ=255)                                    aaGTGAAAGTAGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTag                                                                                                                                                                                                               <  1:86043/249‑1 (MQ=255)                                              aGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGc                                                                                                                                                                                                                                           <  1:306708/211‑1 (MQ=255)                                              aGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCg                                                                                                                                                                                                                  <  1:581585/236‑1 (MQ=255)                                                aaaaCGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAaaga                                                                                                                                                                                                  <  1:817281/250‑1 (MQ=255)                                                aaaaCGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAaaga                                                                                                                                                                                                  <  1:349571/250‑1 (MQ=255)                                                aaaaCGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAaaga                                                                                                                                                                                                  <  1:500648/250‑1 (MQ=255)                                                aaaaCGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAaaga                                                                                                                                                                                                  <  1:561904/250‑1 (MQ=255)                                                 aaaCGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAaagaag                                                                                                                                                                                                <  1:500854/251‑1 (MQ=255)                                                          ggCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATacac                                                                                                                                                                                                                          <  1:606314/216‑1 (MQ=255)                                                            cGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGa                                                                                                                                                                                      <  1:520418/250‑1 (MQ=255)                                                            cGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGa                                                                                                                                                                                      <  1:434257/250‑1 (MQ=255)                                                              aaaaTCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGAcg                                                                                                                                                                                    >  1:568197/1‑250 (MQ=255)                                                                     ccGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATaaa                                                                                                                                                                            >  1:726611/1‑251 (MQ=255)                                                                        gtgtTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAaagaag                                                                                                                                                                                                <  1:530288/228‑1 (MQ=255)                                                                           ttGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTc                                                                                                                                                                      <  1:643205/251‑1 (MQ=255)                                                                                  ttCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCt                                                                                                                                                                        >  1:696496/1‑242 (MQ=255)                                                                                    ccGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATacac                                                                                                                                                                                                                          >  1:352800/1‑190 (MQ=255)                                                                                            gcgcTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATac                                                                                                                                                                                                                            >  1:493801/1‑180 (MQ=255)                                                                                            gcgcTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATc                                                                                                                                                                         <  1:771710/231‑1 (MQ=255)                                                                                            gcgcTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCg                                                                                                                                                     >  1:362857/1‑251 (MQ=255)                                                                                               cTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATac                                                                                                                                                                                                                            >  1:787900/1‑177 (MQ=255)                                                                                               cTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGtt                                                                                                                                                   <  1:886243/250‑1 (MQ=255)                                                                                                 ggAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATc                                                                                                                                                                         >  1:638930/1‑226 (MQ=255)                                                                                                           gtgtTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCtt                                                                                                                                      >  1:184901/1‑251 (MQ=255)                                                                                                            tgtTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTg                                                                                                                                     >  1:85801/1‑251 (MQ=255)                                                                                                             gtTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATc                                                                                                                                                                         >  1:873620/1‑214 (MQ=255)                                                                                                                      gggCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTgg                                                                                                                            >  1:879976/1‑250 (MQ=255)                                                                                                                           atatTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTaaa                                                                                                                      >  1:329693/1‑251 (MQ=255)                                                                                                                             atTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTaaaaa                                                                                                                    >  1:99677/1‑251 (MQ=255)                                                                                                                                    gTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCttt                                                                                                             >  1:835014/1‑251 (MQ=255)                                                                                                                                         aGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGaa                                                                                                        >  1:836750/1‑251 (MQ=255)                                                                                                                                                   atatCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAaagaag                                                                                                                                                                                                <  1:295536/153‑1 (MQ=255)                                                                                                                                                     atCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTAt                                                                                                                                                                                                                    >  1:684041/1‑131 (MQ=255)                                                                                                                                                       cGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGa                                                                                                                                                                                      <  1:72072/159‑1 (MQ=255)                                                                                                                                                            aaGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAAtt                                                                                      >  1:305940/1‑250 (MQ=255)                                                                                                                                                              gTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCAc                                                                                              >  1:876245/1‑240 (MQ=255)                                                                                                                                                                  ccGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAAtt                                                                               >  1:634798/1‑251 (MQ=255)                                                                                                                                                                    gTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATc                                                                                                                                                                         >  1:862122/1‑159 (MQ=255)                                                                                                                                                                    gTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGaaa                                                                                                       >  1:272837/1‑225 (MQ=255)                                                                                                                                                                    gTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAATTaa                                                                             >  1:711467/1‑251 (MQ=255)                                                                                                                                                                           aCGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGa                                                                                                                                                                                      >  1:563669/1‑139 (MQ=255)                                                                                                                                                                              gTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGa                                                                                                                                                                                      >  1:506637/1‑136 (MQ=255)                                                                                                                                                                                  aaaGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAATTAAAGTGCGGTTAtttt                                                               >  1:532207/1‑251 (MQ=255)                                                                                                                                                                                                aaGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAATTAAAGTGCGGTTATTTTTTTCGGTGTTTTTc                                                 <  1:224961/251‑1 (MQ=255)                                                                                                                                                                                                    tGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAATTAAAGTGCGGTTATTTTTTTCGGTGTTTTTCAGAt                                             <  1:781159/251‑1 (MQ=255)                                                                                                                                                                                                             cGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAATTAAAGTGCGGTTATTTTTTTCGGTGTTTTTCAGATGGCGCTACt                                    <  1:565627/251‑1 (MQ=255)                                                                                                                                                                                                                gATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAATTAAAg                                                                           >  1:876460/1‑209 (MQ=255)                                                                                                                                                                                                                  ttCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAATTAAAGTGCGGTTATTTTTTTCGGTGTTTTTCAGATGGCGCTACTTTTTa                               >  1:842179/1‑251 (MQ=255)                                                                                                                                                                                                                    cAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAATTAAAGTGCGGTTATTTTTTTCGGTGTTTTTCAGATGGCGCTACTTTTTaaa                             >  1:278861/1‑251 (MQ=255)                                                                                                                                                                                                                          ggCGACACCCTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAATTAAAGTGCGGTTATTTTTTTCGGTGTTTTTCAGATGGCGCTACTTTTTAAACTTgcg                       >  1:250373/1‑251 (MQ=255)                                                                                                                                                                                                                                 cccTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCaaaaaa                                                                                                                                                         <  1:637132/114‑1 (MQ=255)                                                                                                                                                                                                                                 cccTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAATTAAAGTGCGGTTATTTTTTTCGGTGTTTTTCAGATGGCGCTACTTTTTAAACTTGCGCCATAtt                >  1:495379/1‑251 (MQ=255)                                                                                                                                                                                                                                 cccTTTGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAATTAAAGTGCGGTTATTTTTTTCGGTGTTTTTCAGATGGCGCTACTTTTTAAACTTGCGCCATAtt                >  1:692558/1‑251 (MQ=255)                                                                                                                                                                                                                                   cTTTGGAAAATCGCTGAAAAACATTACCGCAATGgcag                                                                                                                                                                                                                                   <  1:116824/38‑1 (MQ=255)                                                                                                                                                                                                                                     ttGGAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAATTAAAGTGCGGTTATTTTTTTCGGTGTTTTTCAGATGGCGCTACTTTTTAAACTTGCGCCATATTTTGt            >  1:559716/1‑251 (MQ=255)                                                                                                                                                                                                                                        gAAAATCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAATTAAAGTGCGGTTATTTTTTTCGGTGTTTTTCAGATGGCGCTACtt                                   >  1:291006/1‑225 (MQ=255)                                                                                                                                                                                                                                         aaaaTCGCTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAATTAAAGTGCGGTTATTTTTTTCGGTGTTTTTCAGATGGCGCTACTTTTTAAACTTGCGCCATATTTTGTCTTc        <  1:69096/251‑1 (MQ=255)                                                                                                                                                                                                                                                cTGAAAAACATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAATTAAAGTGCGGTTATTTTTTTCGGTGTTTTTCAGATGGCGCTACTTTTTAAACTTGCGCCATATTTTGTCTTCCTGTcc  <  1:514182/250‑1 (MQ=255)                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                  CATTAACGAAGACAATCCCGGCGTTGCCGATGTGGAAGTGAAAGTAGAAAACGGTGTGGCGAAAATCGCCGGTGTTGCCAGTTCCGCCACTGCGCTGGAAAAAGCCGTGTTAATGACGGGCAATATTGTCGGTATCAGCGAAGTCAATATCGATGAAGTCACCGTGCAAAACGGTGAAAAGATTGCCGGCGAAGATGAATTTTACGTGATTCAAAAAGGCGACACCCTTTGGAAAATCGCTGAAAAAAATTACCGCAATGGCAGCAAATACACTGCTATCGTAGCAGCCAATAAAGAAGTGATTAAAGACGCGGATAAAATCTTCCCCGGGCAAAAAATTCGTTTGCCGAAAAGCTTGTAGACTTGGCTTAAAAAATGCTTTGGGAAATGACCGCACTTTAAATTTGAAATTAAAGTGCGGTCATTTTTTTCGGTGTTTTTCAGATGGCGCTACTTTTTAAACTTGCGCCATATTTTGTCTTCCTGTCC  >  1/54657‑55145

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑