| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,808,948 | T→C | M128V (ATG→GTG) | unknown ← | Inner membrane protein YohK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,808,948 | 0 | T | C | 100.0% | 254.9 / NA | 88 | M128V (ATG→GTG) | unknown | Inner membrane protein YohK |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (42/46); total (42/46) | |||||||||||
ATACTAAGGAAATGGAACTGTAACTGCCGGCTTTCTTATCGTTTTCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCATGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGCCAACGCAACAATACTTACGCCCAATAAATTATTGAGTGGCGCGTTACCTTCCATATAACTTTCATAAGGCAATTTGAAAAT > 1/1808702‑1809191 | aTACTAAGGAAATGGAACTGTAACTGCCGGCTTTCTTATCGTTTTCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGAt < 1:325298/251‑1 (MQ=255)aTACTAAGGAAATGGAACTGTAACTGCCGGCTTTCTTATCGTTTTCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGAt > 1:554026/1‑251 (MQ=255)aTACTAAGGAAATGGAACTGTAACTGCCGGCTTTCTTATCGTTTTCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGAt > 1:491306/1‑251 (MQ=255)aTACTAAGGAAATGGAACTGTAACTGCCGGCTTTCTTATCGTTTTCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGAt > 1:18955/1‑251 (MQ=255)aTACTAAGGAAATGGAACTGTAACTGCCGGCTTTCTTATCGTTTTCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGAt > 1:47710/1‑251 (MQ=255) ggAAATGGAACTGTAACTGCCGGCTTTCTTATCGTTTTCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCa > 1:646576/1‑251 (MQ=255) aTGGAACTGTAACTGCCGGCTTTCTTATCGTTTTCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAacac < 1:677591/251‑1 (MQ=255) tGTAACTGCCGGCTTTCTTATCGTTTTCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGcc < 1:830894/251‑1 (MQ=255) ccGGCTTTCTTATCGTTTTCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAatat < 1:506125/250‑1 (MQ=255) cTTTCTTATCGTTTTCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGc < 1:53516/251‑1 (MQ=255) cTTTCTTATCGTTTTCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGc < 1:680809/251‑1 (MQ=255) cTTTCTTATCGTTTTCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATCTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGc < 1:443138/251‑1 (MQ=255) ttCTTATCGTTTTCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAgg > 1:507653/1‑248 (MQ=255) tttCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCCCGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGc < 1:344964/251‑1 (MQ=255) tttCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCcaca < 1:135165/230‑1 (MQ=255) tttCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAg > 1:578839/1‑250 (MQ=255) tttCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAg > 1:834947/1‑250 (MQ=255) tttCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAg > 1:837695/1‑250 (MQ=255) ccATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAAt > 1:880308/1‑251 (MQ=255) ccATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAAt > 1:272939/1‑251 (MQ=255) aTACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATaa < 1:787043/251‑1 (MQ=255) aTACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGAATTCTTTATTTGTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCGCCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCTCGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATaa < 1:497037/251‑1 (MQ=255) cTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGc < 1:381133/248‑1 (MQ=255) cTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCaa < 1:756917/250‑1 (MQ=255) cTTACCGTGCCTAACGCGTGAGAAACGGCGCCAACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCCCCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCaa < 1:204845/250‑1 (MQ=255) aCCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGAt > 1:717825/1‑251 (MQ=255) ccGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGAt > 1:813124/1‑250 (MQ=255) gCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATcccc > 1:780116/1‑250 (MQ=255) tGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACAt < 1:293824/251‑1 (MQ=255) aaaCGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGac < 1:275205/251‑1 (MQ=255) aaaCGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGac < 1:535510/251‑1 (MQ=255) aaaCGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGac < 1:7504/251‑1 (MQ=255) aaaCGGCGCCCACGGATAATCCGAGGAATTCTTTATTTTTCAAGCCGATTTTGTTTAATAATAAATACCCGAAAATAGACCCCTGTAAACCGGCAACCACCAGGCCCACCGCCGCCACAGAAGTAATGCCGCCAAGATTTTCAGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGac < 1:675789/251‑1 (MQ=255) aaCGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGaca < 1:673615/251‑1 (MQ=255) cccACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGa < 1:853917/251‑1 (MQ=255) cACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAg < 1:73935/251‑1 (MQ=255) cGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCCCCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCcaca < 1:682562/185‑1 (MQ=255) cGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGc > 1:898262/1‑214 (MQ=255) cGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAgc > 1:14368/1‑250 (MQ=255) aTTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGAtt > 1:177503/1‑251 (MQ=255) aTTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGAtt < 1:855858/251‑1 (MQ=255) ttATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGc < 1:50021/174‑1 (MQ=255) ttATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAaat > 1:840013/1‑251 (MQ=255) ttATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAaat < 1:11068/251‑1 (MQ=255) aTTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGtt > 1:232467/1‑251 (MQ=255) ttGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAGCCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCg < 1:812066/251‑1 (MQ=255) ggTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGaa > 1:769113/1‑251 (MQ=255) gTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCCCCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAat < 1:717450/146‑1 (MQ=255) ataataaATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGCCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACAt > 1:269262/1‑190 (MQ=255) aaataGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATccccc > 1:630303/1‑175 (MQ=255) gCCGAAAATAGACCCCTGTAACCCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGc < 1:595860/139‑1 (MQ=255) aaaTAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGc < 1:252401/134‑1 (MQ=255) aaaTAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCatat > 1:726036/1‑251 (MQ=255) aaTAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCAtata < 1:261769/251‑1 (MQ=255) aTAGCCCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCat < 1:891346/247‑1 (MQ=255) aTAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGac > 1:878463/1‑177 (MQ=255) aTAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATaa < 1:183236/251‑1 (MQ=255) ccccTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGaa > 1:721058/1‑251 (MQ=255) ccTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGa < 1:816759/178‑1 (MQ=255) ccTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCg > 1:772143/1‑189 (MQ=255) ccTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATa > 1:812151/1‑251 (MQ=255) ccTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATa > 1:625922/1‑251 (MQ=255) cTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACGACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAg > 1:437701/1‑251 (MQ=255) tAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGcc < 1:375270/250‑1 (MQ=255) aatgtgtaaaaaggacaggCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGcc < 1:656725/232‑1 (MQ=255) ccGGCAACCCCCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGCCAACGc < 1:187229/251‑1 (MQ=255) ggCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAACTTGTTCATATAACGGAATAGCCAACGcaa > 1:625235/1‑251 (MQ=255) caccacGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGCCAACGCAACAATa > 1:723375/1‑250 (MQ=255) accacGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAAt > 1:856337/1‑233 (MQ=255) ccacGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGCCAACGCAACAATACtt < 1:875135/251‑1 (MQ=255) cacGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGCCAACGCAACAATACTTa < 1:57341/251‑1 (MQ=255) ccACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGCCAACGCAACAATACTTACGccc < 1:805863/251‑1 (MQ=255) ccgccACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTtgtg > 1:156038/1‑164 (MQ=255) ccgccACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGCCAACGCAACAATACTTACGCCCAATaa < 1:353530/250‑1 (MQ=255) ccACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTgcgc > 1:369310/1‑99 (MQ=255) cACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCg > 1:24590/1‑155 (MQ=255) cACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGCCAACGCAACAATACTTACGCCCAATAAattat < 1:298003/251‑1 (MQ=255) gaaggaaTGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGCCAACGCAACAATACTTACGCCCAATAAATTATTGAg > 1:211795/1‑251 (MQ=255) ccAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGCCAACGCAACAATACTTACGCCCAATAAATTATTGAGTGGCGCGTTAc < 1:688314/250‑1 (MQ=255) aTTTTCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGCCAACGCAACAATACTTACGCCCAATAAATTATTGAGTGGCGCGTTACCTTc < 1:697921/249‑1 (MQ=255) ttttCGGACACCGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGc < 1:144187/81‑1 (MQ=255) ccGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGc < 1:582027/59‑1 (MQ=255) ccGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACgg > 1:118772/1‑181 (MQ=255) ccGCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGCCAACGCAACAATACTTACGCCCAATAAATTATTGAGTGGCGCGTTACCTTCCATATAACTTTCa > 1:837941/1‑251 (MQ=255) gCCATGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGCCAACGCAACAATACTTACGCCCAATAAattat > 1:865062/1‑217 (MQ=255) tGGCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGCCAACGCAACAATACTTACGCCCAATAAATTATTGAGTGGCGCGTTAc > 1:711768/1‑228 (MQ=255) ggCAATGGGCGTCGTCACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAGCATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGCCAACGCAACAATACTTACGCCCAATAAATTATTGAGTGGCGCGTTACCTTCCATATAAc > 1:284993/1‑239 (MQ=255) tcgtcACGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGCCAACGCAACAATACTTACGCCCAATAAATTATTGAGTGGCGCGTTACCTTCCATATAACTTTCATAAGGCAATTTGAAAAt > 1:414524/1‑250 (MQ=255) | ATACTAAGGAAATGGAACTGTAACTGCCGGCTTTCTTATCGTTTTCCATACAGCTTACCGTGCCTAACGCGTGAGAAACGGCGCCCACGGATAATCCGATGGATTCTTTATTTTTCAAGCCGATTTTGGTTAATAATAAATAGCCGAAAATAGACCCCTGTAAACCGGCAACCACCACGCCCACCGCCGCCACGGAAGGAATGCCGCCAAGATTTTCGGACACCGCCATGGCAATGGGCGTCGTCATGGATTTCGGCAACACGGTAGCCACAATATCAGGCTGTGCGCCAAGCAATAAAGCAAAGATCCCCCCGCTTAACATAGACAACACAGAAGCCGCCACCGTTGTGATTAAAATAATTTGCCAGTAGTTGCGAATTTGGCGAAGTTGTTCATATAACGGAATAGCCAACGCAACAATACTTACGCCCAATAAATTATTGAGTGGCGCGTTACCTTCCATATAACTTTCATAAGGCAATTTGAAAAT > 1/1808702‑1809191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |