| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,779,210 | T→C | L136P (CTG→CCG) | unknown → | Probable zinc protease pqqL (EC 3.4.99.‑) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,779,210 | 0 | T | C | 100.0% | 240.8 / NA | 83 | L136P (CTG→CCG) | unknown | Probable zinc protease pqqL (EC 3.4.99.‑) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (36/47); total (36/47) | |||||||||||
TCAAATTTATCAAGAAAAGATTTTAGGTAAAACGGATTTCACTTATTTCATTATTGGTGATATTTCCCGATCCGAGGTCGAAAAATTGGCAAAGCGATATTTAGCGACAGTGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCTGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCATCAAATTTTGGATGAAATTATTGAAAACGGTATAGATGAAACACTACTT > 1/1778965‑1779454 | tCAAATTTATCAAGAAAAGATTTTAGGTAAAACGGATTTCACTTATTTCATTATTGGTGATATTTCCCGATCCGAGGTCGAAAAATTGGCAAAGCGATATTTAGCGACAGTGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAAc < 1:780804/251‑1 (MQ=255) aaTTTATCAAGAAAAGATTTTAGGTAAAACGGATTTCACTTATTTCATTATTGGTGATATTTCCCGATCCGAGGTCGAAAAATTGGCAAAGCGATATTTAGCGACAGTGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAgc < 1:201420/251‑2 (MQ=255) tttATCAAGAAAAGATTTTAGGTAAAACGGATTTCACTTATTTCATTATTGGTGATATTTCCCGATCCGAGGTCGAAAAATTGGCAAAGCGATATTTAGCGACAGTGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGaaa < 1:559379/251‑1 (MQ=255) aTCAAGAAAAGATTTTAGGTAAAACGGATTTCACTTATTTCATTATTGGTGATATTTCCCGATCCGAGGTCGAAAAATTGGCAAAGCGATATTTAGCGACAGTGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAatat < 1:788375/251‑1 (MQ=255) tttCACTTATTTCATTATTGGTGATATTTCCCGATCCGAGGTCGAAAAATTGGCAAAGCGATATTTAGCGACAGTGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTa > 1:762226/1‑250 (MQ=255) cACTTATTTCATTATTGGTGATATTTCCCGATCCGAGGTCGAAAAATTGGCAAAGCGATATTTAGCGACAGTGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAg < 1:11179/251‑1 (MQ=255) aCTTATTTCATTATTGGTGATATTTCCCGATCCGAGGTCGAAAAATTGGCAAAGCGATATTTAGCGACAGTGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGc > 1:169489/1‑221 (MQ=255) aTTTCATTATTGGTGATATTTCCCGATCCGAGGTCGAAAAATTGGCAAAGCGATATTTAGCGACAGTGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGaaaaa > 1:176401/1‑251 (MQ=255) cATTATTGGTGATATTTCCCGATCCGAGGTCGAAAAATTGGCAAAGCGATATTTAGCGACAGTGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGaaa > 1:183762/1‑208 (MQ=255) ttattGGTGATATTTCCCGATCCGAGGTCGAAAAATTGGCAAAGCGATATTTAGCGACAGTGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCg > 1:211399/1‑250 (MQ=255) tttCCCGATCCGAGGTCGAAAAATTGGCATAGCGATATTTAGCGACAGTGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCGCGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAAGATGCCTTAGAAAGCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGt < 1:884856/251‑1 (MQ=255) cccGATCCGAGGTCGAAAAATTGGCAAAGCGATATTTAGCGACAGTGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGaaa > 1:244888/1‑191 (MQ=255) cGAGGTCGAAAAATTGGCAAAGCGATATTTAGCGACAGTGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTAt < 1:648651/251‑1 (MQ=255) ttGGCAAAGCGATATTTAGCGACAGTGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTc < 1:852622/251‑1 (MQ=255) ttGGCAAAGCGATATTTAGCGACAGTGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTc < 1:868644/251‑1 (MQ=255) tGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCa < 1:589119/247‑1 (MQ=255) tAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGGTGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCAt > 1:127629/1‑251 (MQ=255) tAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCAt > 1:881113/1‑251 (MQ=255) aaaaCACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATAc < 1:512798/251‑1 (MQ=255) acacAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGc < 1:83461/207‑1 (MQ=255) ggCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGc > 1:778277/1‑135 (MQ=255) ggCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGt > 1:23681/1‑220 (MQ=255) ggCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATc < 1:378305/236‑1 (MQ=255) gCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAAt > 1:370556/1‑251 (MQ=255) cccGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCAt > 1:664524/1‑239 (MQ=255) cccGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAAtt > 1:43278/1‑251 (MQ=255) cTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAggg > 1:762442/1‑251 (MQ=255) tATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGGACAAGAAAACCTTCGCCTTGTTTTACGTGAAAAAGTATAGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGaa > 1:604519/1‑251 (MQ=255) aGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTc > 1:321037/1‑196 (MQ=255) cGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATc < 1:154435/218‑1 (MQ=255) ggTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCa > 1:623408/1‑212 (MQ=255) gTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTc < 1:63458/190‑1 (MQ=255) gTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTc > 1:42684/1‑206 (MQ=255) gTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATc < 1:12793/216‑1 (MQ=255) gTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGtt > 1:272445/1‑250 (MQ=255) atatTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATAc < 1:108357/220‑1 (MQ=255) tatTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATc > 1:793367/1‑121 (MQ=255) tatTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTc < 1:349402/186‑1 (MQ=255) tatTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGtt > 1:651386/1‑251 (MQ=255) ccTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTGCAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATc < 1:886495/202‑1 (MQ=255) ccTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTc < 1:589416/176‑1 (MQ=255) ccTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGt > 1:711356/1‑186 (MQ=255) ccTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATAc < 1:403438/209‑1 (MQ=255) ccTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAAtt > 1:530405/1‑219 (MQ=255) ccTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTaa > 1:669401/1‑251 (MQ=255) ccTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTaa > 1:635597/1‑251 (MQ=255) cTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAAt < 1:405076/251‑1 (MQ=255) tAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATc < 1:759490/251‑1 (MQ=255) aaaGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGc < 1:787622/251‑1 (MQ=255) aaaGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGc < 1:260269/251‑1 (MQ=255) cattcattATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTgaa > 1:400076/1‑251 (MQ=255) ttcattATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTAt > 1:685736/1‑162 (MQ=255) cattATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAAt < 1:788860/216‑1 (MQ=255) cattATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGt < 1:496874/241‑1 (MQ=255) cattATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAAt > 1:522022/1‑251 (MQ=255) tGCGCGGATTAAGTGAACCACGTGCTGATGTTGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATc < 1:271326/251‑1 (MQ=255) tGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATc < 1:271331/251‑1 (MQ=255) gATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGt > 1:453218/1‑230 (MQ=255) gATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGc < 1:438431/232‑1 (MQ=255) tAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGt < 1:346876/212‑1 (MQ=255) tAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGAcc < 1:707649/251‑1 (MQ=255) tAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGAc > 1:74166/1‑250 (MQ=255) aaGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGAccc < 1:469851/251‑1 (MQ=255) aGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCa > 1:818641/1‑251 (MQ=255) gAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCATCa > 1:109267/1‑251 (MQ=255) cACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCATCAAAtt < 1:403253/251‑1 (MQ=255) gTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCATCa < 1:735601/244‑1 (MQ=255) gTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCATCAAATTTTg > 1:62960/1‑251 (MQ=255) tGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCATCAAATTTTgg > 1:785863/1‑251 (MQ=255) gAAATTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCATCAAATTTTGGATGAAatta < 1:581508/250‑1 (MQ=255) aaaTTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCAc > 1:777952/1‑195 (MQ=255) aaTTTATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCa < 1:689217/144‑1 (MQ=255) ttATCTTACCGCTGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTg > 1:622035/1‑164 (MQ=255) tGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCATCAAATTTTGGATGAAATTATTGAAAACGGTATAGATg < 1:802812/251‑1 (MQ=255) tGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCATCAAATTTTGGATGAAATTATTGAAAACGGTATAGATg < 1:900960/251‑1 (MQ=255) tGAAAATCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCATCAAATTTTGGATGAAATTATTGAAAACGGTATAGATg < 1:212433/251‑1 (MQ=255) tCAATGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCATCAAATTTTGGATGAAATTATTGAAAACGGTATAGATGAAacac < 1:318562/251‑1 (MQ=255) aTGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCGTCAAATTTTGGATGAAATTATTGAAAACGGTATAGATGAAACactac < 1:463609/251‑1 (MQ=255) aTGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCATCAAATTTTGGATGAAATTATTGAAAACGGTATAGATGAAACactac < 1:726959/251‑1 (MQ=255) aTGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCATCAAATTTTGGATGAAATTATTGAAAACGGTATAGATGAAACactac < 1:409844/251‑1 (MQ=255) aTGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCATCAAATTTTGGATGAAATTATTGAAAACGGTATAGATGAAACactac < 1:786143/251‑1 (MQ=255) aTGGCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCATCAAATTTTGGATGAAATTATTGAAAACGGTATAGATGAAACactac < 1:772177/251‑1 (MQ=255) gCATCCGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCATCAAATTTTGGATGAAATTATTGAAAACGGTATAGATGAAACACTACtt < 1:772313/250‑1 (MQ=255) | TCAAATTTATCAAGAAAAGATTTTAGGTAAAACGGATTTCACTTATTTCATTATTGGTGATATTTCCCGATCCGAGGTCGAAAAATTGGCAAAGCGATATTTAGCGACAGTGGAAATAAAAACACAGGCCCGTGCTTATCAGCCCGGTTATATTCATACTCCTAAAAAAGCATTCATTATGCGCGGATTAAGTGAACCACGTGCTGATGTGGAAATTTATCTTACCGCTGAAAATCAATGGCATCTGGAACAGAAATATGCCTTAGAAATCCTTGCTGAAATTGTACAAGAAAAACTTCGCCTTGTTTTACGTGAAAAAGTATCGGGCATTTATTCCGTCAATAGTTGGTTCAGCCAAGATCCGCATACGCCGCAAATTGAAGGGAAAATTGCGTTCAGTTGCGCACCTAATCGTGCTGAAGAATTAATCAAATTGACCCATCAAATTTTGGATGAAATTATTGAAAACGGTATAGATGAAACACTACTT > 1/1778965‑1779454 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |