Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,590,353 A→G C479R (TGT→CGT)  unknown ← Guanosine‑3',5'‑bis(diphosphate) 3'‑pyrophosphohydrolase (EC 3.1.7.2) / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,590,3530AG100.0% 211.2 / NA 74C479R (TGT→CGT) unknownGuanosine‑3',5'‑bis(diphosphate) 3'‑pyrophosphohydrolase (EC 3.1.7.2) / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (40/34);  total (40/34)

GTGTGGTTGTCAGGGTTGCCGTCCGTATCAATTTCAATGGATTCGCCCAGCAAACGATGCGCAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACACAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGTCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAA  >  1/1590115‑1590595
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                  
gtgtGGTTGTCAGGGTTGCCGTCCGTATCAATTTCAATGGATTCGCCCAGCAAACGATGCGCAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATc                                                                                                                                                                                                                                              >  1:325473/1‑245 (MQ=255)
   tgGTTGTCAGGGTTGCCGTCCGTATCAATTTCAATGGATTCGCCCAGCAAACGATGCGCAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAg                                                                                                                                                                                                                                      <  1:136806/250‑1 (MQ=255)
     gTTGTCAGGGTTGCCGTCCGTATCAATTTCAATGGATTCGCCCAGCAAACGATGCGCAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGt                                                                                                                                                                                                                                   >  1:596832/1‑251 (MQ=255)
       tGTCAGGGTTGCCGTCCGTATCAATTTCAATGGATTCGCCCAGCAAACGATGCGCAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGa                                                                                                                                                                                                                                 >  1:678981/1‑251 (MQ=255)
             ggTTGCCGTCCGTATCAAATTCAATTGATTCCCCCAGCAAAAGATGCGCAATGACCGTGCTCATTTGGTTGCCTAAACCGAATTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAAt                                                                                                                                                                                                                            <  1:696612/250‑1 (MQ=255)
                   cgtccgtATCAATTTCAATGGATTCGCCCAGCAAACGATGCGCAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGaa                                                                                                                                                                                                                     <  1:345014/251‑1 (MQ=255)
                    gtccgtATCAATTTCAATGGATTCGCCCAGCAAACGATGCGCAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGaa                                                                                                                                                                                                                     >  1:284460/1‑250 (MQ=255)
                    gtccgtATCAATTTCAATGGATTCGCCCAGCAAACGATGCGCAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGaa                                                                                                                                                                                                                     >  1:620749/1‑250 (MQ=255)
                              aTTTCAATGGATTCGCCCAGCAAACGATGCGCAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGaa                                                                                                                                                                                                                     >  1:660911/1‑240 (MQ=255)
                                                 gCAAACGATGCGCAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGc                                                                                                                                                                                                          <  1:578687/232‑1 (MQ=255)
                                                        aTGCGCAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTaagccaagcc                                                                                                                                                                                 <  1:256305/250‑1 (MQ=255)
                                                        aTGCGCAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAagccaagcca                                                                                                                                                                                >  1:637477/1‑251 (MQ=255)
                                                          gcgcAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTgg                                                                                                                                                                                                           >  1:188703/1‑222 (MQ=255)
                                                          gcgcAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCcaca                                                                                                                                                                              >  1:608643/1‑251 (MQ=255)
                                                           cgcAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACAt                                                                                                                                                                             <  1:261161/251‑1 (MQ=255)
                                                             cAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTa                                                                                                                                                                           >  1:654208/1‑251 (MQ=255)
                                                             cAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTa                                                                                                                                                                           >  1:731350/1‑251 (MQ=255)
                                                                tGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGt                                                                                                                                                                        <  1:354994/251‑1 (MQ=255)
                                                                                   gCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGt                                                                                                                                                                        >  1:792176/1‑232 (MQ=255)
                                                                                              tttCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATg                                                                                                                                          <  1:184540/251‑1 (MQ=255)
                                                                                               ttCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATgg                                                                                                                                         <  1:213652/251‑1 (MQ=255)
                                                                                                tCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGt                                                                                                                                        >  1:513833/1‑251 (MQ=255)
                                                                                                tCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGt                                                                                                                                        >  1:224608/1‑251 (MQ=255)
                                                                                                 ccATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTc                                                                                                                                       <  1:718306/251‑1 (MQ=255)
                                                                                                     aaataaatCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGc                                                                                                                                    >  1:731036/1‑250 (MQ=255)
                                                                                                         aaatCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGa                                                                                                                               <  1:879647/251‑1 (MQ=255)
                                                                                                             cATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATAc                                                                                                                                                                                                                          >  1:817878/1‑156 (MQ=255)
                                                                                                             cATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTc                                                                                                                            >  1:122008/1‑250 (MQ=255)
                                                                                                                   aaCTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAgg                                                                                                                       >  1:126126/1‑249 (MQ=255)
                                                                                                                        gCTAATTTCAGATCCGCTAAGACATTTTGGGAATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGCGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGa                                                                                                                >  1:76345/1‑251 (MQ=255)
                                                                                                                         cTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGAt                                                                                                               <  1:752775/251‑1 (MQ=255)
                                                                                                                                  gATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAAc                                                                                                            >  1:560162/1‑245 (MQ=255)
                                                                                                                                    tCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAgg                                                                                                    <  1:511103/251‑1 (MQ=255)
                                                                                                                                      cGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGtt                                                                                                  >  1:21095/1‑251 (MQ=255)
                                                                                                                                            gACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGAt                                                                                            >  1:21592/1‑251 (MQ=255)
                                                                                                                                               aTTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGt                                                                                                                                                                        >  1:592990/1‑172 (MQ=255)
                                                                                                                                                        atatTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAgg                                                                                                    <  1:316737/231‑1 (MQ=255)
                                                                                                                                                        atatTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTggcgg                                                                                >  1:744885/1‑251 (MQ=255)
                                                                                                                                                        atatTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTggcgg                                                                                >  1:431396/1‑251 (MQ=255)
                                                                                                                                                          atTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGc                                                                                                                      <  1:147247/211‑1 (MQ=255)
                                                                                                                                                          atTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGc                                                                                                                      >  1:845671/1‑211 (MQ=255)
                                                                                                                                                          atTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAgg                                                                                                    >  1:100265/1‑229 (MQ=255)
                                                                                                                                                          atTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGgcggcg                                                                              >  1:534938/1‑251 (MQ=255)
                                                                                                                                                          atTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGgcggcg                                                                              >  1:383500/1‑251 (MQ=255)
                                                                                                                                                          atTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGgcggcg                                                                              >  1:461364/1‑251 (MQ=255)
                                                                                                                                                            acAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGa                                                                             >  1:611995/2‑250 (MQ=255)
                                                                                                                                                               atatTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATgg                                                                                                                                         <  1:524030/187‑1 (MQ=255)
                                                                                                                                                               atatTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTgg                                                                                   <  1:91910/241‑1 (MQ=255)
                                                                                                                                                               atatTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGAcaca                                                                         >  1:552707/1‑251 (MQ=255)
                                                                                                                                                                 atTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAAt                                                                       >  1:480407/1‑251 (MQ=255)
                                                                                                                                                                              aaTTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAat                                                                                                                                                 >  1:699318/1‑164 (MQ=255)
                                                                                                                                                                                  ttAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCtgtg                                                      <  1:443721/251‑1 (MQ=255)
                                                                                                                                                                                     aCGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGc                                                   <  1:878553/251‑1 (MQ=255)
                                                                                                                                                                                     aCGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGc                                                   <  1:70498/251‑1 (MQ=255)
                                                                                                                                                                                        gACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGc                                                                                                                                                            <  1:143282/143‑1 (MQ=255)
                                                                                                                                                                                        gACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTc                                                                    >  1:580896/1‑231 (MQ=255)
                                                                                                                                                                                        gACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACg                                                >  1:348766/1‑251 (MQ=255)
                                                                                                                                                                                          cTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGAtt                                                                                                                             >  1:517372/1‑172 (MQ=255)
                                                                                                                                                                                          cTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACgg                                               >  1:661466/1‑250 (MQ=255)
                                                                                                                                                                                                 cGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGc                                        <  1:1911/250‑1 (MQ=255)
                                                                                                                                                                                                 cGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCa                                       <  1:659219/251‑1 (MQ=255)
                                                                                                                                                                                                         aaTTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGAt                                                                                            >  1:574386/1‑190 (MQ=255)
                                                                                                                                                                                                                    aCCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGc                                                                                                                                                            <  1:637248/115‑1 (MQ=255)
                                                                                                                                                                                                                     ccGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGcc                   <  1:251151/251‑1 (MQ=255)
                                                                                                                                                                                                                       ggATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTgcgc                    <  1:706375/248‑1 (MQ=255)
                                                                                                                                                                                                                        gATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCgg                            <  1:269164/239‑1 (MQ=255)
                                                                                                                                                                                                                         aTTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCgg                                                                                                                                                                                                        >  1:537440/1‑66 (MQ=255)
                                                                                                                                                                                                                            cAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGt            <  1:4390/251‑1 (MQ=255)
                                                                                                                                                                                                                               tGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGc         <  1:812500/251‑1 (MQ=255)
                                                                                                                                                                                                                                ggCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGc                                              <  1:432120/213‑1 (MQ=255)
                                                                                                                                                                                                                                  cTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGaa                                                                                                                                                                                                                     <  1:650594/44‑1 (MQ=255)
                                                                                                                                                                                                                                    tcatcaCGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTAc    <  1:285226/251‑1 (MQ=255)
                                                                                                                                                                                                                                      atcaCGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACaa  <  1:862222/251‑1 (MQ=255)
                                                                                                                                                                                                                                      atcaCGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACaa  <  1:119353/251‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                  
GTGTGGTTGTCAGGGTTGCCGTCCGTATCAATTTCAATGGATTCGCCCAGCAAACGATGCGCAATGACGGTGCTCATTTGGTTGCCTAAACCGATTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACACAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGTCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAA  >  1/1590115‑1590595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑