| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,567,917 | A→G | *185Q (TAG→CAG) | unknown ← | Phosphoglycerate transport system transcriptional regulatory protein PgtA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,567,917 | 0 | A | G | 100.0% | 172.5 / NA | 60 | *185Q (TAG→CAG) | unknown | Phosphoglycerate transport system transcriptional regulatory protein PgtA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (31/29); total (31/29) | |||||||||||
CGCTACACCCGCCGCGGCGGGTTGGACATCAACCCATACCGCTCCAACTTTGAACCTTTACCACCGAATTTACGACTGGCACGGCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATTTTCCCCTAATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTCACATTTCCATGCCATTCTTTATTGCGTAAATTTTGCAACATTTTTTTATCCGGGATTACGATGGGTTTATTTAATCTGA > 1/1567676‑1568156 | cgcTACACCCGCCGCGGCGGGTTGGACGTCAACCCATACCGCTCCAACTTTGAACCTTTACCACCGAATTTACGACTGGCACGGCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATaaaaaa > 1:47028/1‑250 (MQ=255)cgcTACACCCGCCGCGGCGGGTTGGACATCAACCCATACCGCTCCAACTTTGAACCTTTACCACCGAATTTACGACTGGCACGGCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATaaaaaa > 1:629500/1‑250 (MQ=255) cAACCCATACCGCTCCAACTTTGAACCTTTACCACCGAATTTACGACTGGCACGGCAGCAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCat < 1:265690/251‑1 (MQ=255) aaCCCATACCGCTCCAACTTTGAACCTTTACCACCGAATTTACGACTGGCACGGCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAgt < 1:99525/240‑1 (MQ=255) aaCCCATACCGCTCCAACTTTGAACCTTTACCACCGAATTTACGACTGGCACGGCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCata > 1:197851/1‑251 (MQ=255) aaCCCATACCGCTCCAACTTTGAACCTTTACCACCGAATTTACGACTGGCACGGCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCata > 1:212675/1‑251 (MQ=255) aCCCATACCGCTCCAACTTTGAACCTTTACCACCGAATTTACGACTGGCACGGCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAAt > 1:117882/1‑235 (MQ=255) aCCCATACCGCTCCAACTTTGAACCTTTACCACCGAATTTACGACTGGCACGGCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCatat > 1:219872/1‑251 (MQ=255) cccATACCGCTCCAACTTTGAACCTTTACCACCGAATTTACGACTGGCACGGCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATAtt < 1:210730/251‑1 (MQ=255) tACCGCTCCAACTTTGAACCTTTACCACCGAATTTACGACTGGCACGGCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGAtt < 1:749168/251‑1 (MQ=255) tACCGCTCCAACTTTGAACCTTTACCACCGAATTTACGACTGGCACGGCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGAtt > 1:330636/1‑251 (MQ=255) tCCAACTTTGAACCTTTACCACCGAATTTACGACTGGCACGGCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTg < 1:672412/251‑1 (MQ=255) aCTTTGAACCTTTACCACCGAATTTACGACTGGCACGGCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATa < 1:70555/221‑1 (MQ=255) caccGAATTTACGACTGGCACGGCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATc < 1:46564/251‑1 (MQ=255) caccGAATTTACGACTGGCACGGCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATc < 1:33094/251‑1 (MQ=255) aTTTACGACTGGCACGGCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGaa > 1:799605/1‑251 (MQ=255) gCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGACATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACaggag > 1:794992/1‑251 (MQ=255) cGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGt < 1:218402/250‑1 (MQ=255) gTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAATTGTTTTTCat > 1:430998/1‑181 (MQ=255) gATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGGTTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCg > 1:450105/1‑251 (MQ=255) gATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTc > 1:495525/1‑181 (MQ=255) gACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTg > 1:234608/1‑172 (MQ=255) aCTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGt < 1:359274/251‑1 (MQ=255) aCTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGt < 1:874333/251‑1 (MQ=255) atttataatttataACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAAt < 1:689015/131‑1 (MQ=255) atttataaCTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAac < 1:361005/196‑1 (MQ=255) atttataaCTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCACTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAAt < 1:607133/185‑1 (MQ=255) ttataaCTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCaa > 1:70054/1‑251 (MQ=255) tttCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATaa < 1:658689/116‑1 (MQ=255) ttCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACaggag < 1:476183/181‑1 (MQ=255) ttCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGt < 1:131133/225‑1 (MQ=255) ttCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTca > 1:715235/1‑250 (MQ=255) ttCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTca > 1:11615/1‑250 (MQ=255) cTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTCACAt < 1:9069/251‑1 (MQ=255) aCCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATc > 1:325441/1‑230 (MQ=255) tatTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTCACATTTCCATGCCAtt > 1:287133/1‑250 (MQ=255) tttttCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAgtt > 1:490146/1‑100 (MQ=255) tGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATg > 1:43496/1‑175 (MQ=255) taagtaaAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTCACATTTCCATGCCATTCttt > 1:657869/1‑240 (MQ=255) gTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTCACATTTCCATGCCATTCTTTATTGCgcaaccaacaaatt > 1:561246/1‑238 (MQ=255) gggAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGt < 1:77993/178‑1 (MQ=255) ggAATATTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTCACATTTCCATGCCATTCTTTATTg < 1:553425/225‑1 (MQ=255) atatTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATAc > 1:831724/1‑125 (MQ=255) atatTGAGGTGTTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTCACATTTCCATGCCATTCTTTATTGCGTAAATTTTGCAACATTTTTTTATCCgg > 1:251820/1‑251 (MQ=255) gtgtTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTCACATTTCCATGCCATTCTTTATTGCGTAAATTTTGCAACATTTTTTTATCCGGGATTACGa > 1:899136/1‑251 (MQ=255) gtTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATc < 1:523203/106‑1 (MQ=255) gtTTAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATc > 1:567399/1‑179 (MQ=255) tAACTACGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAAt < 1:702060/110‑1 (MQ=255) cGTCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTCACATTTCCATGCCATTCTTTATTGCGTAAATTTTGCAACATTTTTTTATCCGGGATTACGATGGGtttattt < 1:480977/251‑1 (MQ=255) tCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCatat < 1:119266/57‑1 (MQ=255) tCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAg < 1:868352/79‑1 (MQ=255) tCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTa > 1:179013/1‑136 (MQ=255) tCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTCACATTTCCATGCCATTCTTTATTGCGTAAAtt > 1:880468/1‑209 (MQ=255) tCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTCACATTTCCATGCCATTCTTTATTGCGTAAATTTTGCAACATTTTTTTATCCGGGATTACGa < 1:855644/238‑1 (MQ=255) tCATTAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTCACATTTCCATGCCATTCTTTATTGCGTAAATTTTGCAACATTTTTTTATCCGGGATTACGATGGGTTTATTTaa > 1:400613/1‑251 (MQ=255) ttAATCTTCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTCACATTTCCATGCCATTCTTTATTGCGTAAATTTTGCAACATTTTTTTATCCGGGATTACGATGGGTTTATTTAATCt < 1:560913/251‑1 (MQ=255) aatcttCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTCACATTTCCATGCCATTCttt > 1:413849/5‑192 (MQ=255) atcttCCCCTGATAAAAAACCAGAGCATCTTCAATAAg < 1:345683/35‑1 (MQ=255) atcttCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTCACATTTCCATGCCATTCTTTAt < 1:228921/190‑1 (MQ=255) atcttCCCCTGATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTCACATTTCCATGCCATTCTTTATTGCGTAAATTTTGCAACATTTTTTTATCCGGGATTACGGTGGGTTTATTTAATCTGa > 1:2429/4‑250 (MQ=255) | CGCTACACCCGCCGCGGCGGGTTGGACATCAACCCATACCGCTCCAACTTTGAACCTTTACCACCGAATTTACGACTGGCACGGCAGTAAAAAAGTGCGGTTAGAAAACGCCATGGATTTTGACCGCACTTTTCGATTTATAATTTATAACTTTTCTTATCCAACCCATATTTTTTCATGCGTAAGTAAAGTTTCTTTCTGGGAATATTGAGGTGTTTAACTACGTCATTAATTTTCCCCTAATAAAAAACCAGAGCATCTTCAATAAGTTGTTTTTCATATTGATTCAATTGTTCATCTAAAGAACTCATCTGCGAATCATTAAATACAGGAGGAACCACCAAAGTAATATGAGAAAGTAAGCCGATTGCATAAAGTTCCGCGACGTTAATCAATTCTTTCACATTTCCATGCCATTCTTTATTGCGTAAATTTTGCAACATTTTTTTATCCGGGATTACGATGGGTTTATTTAATCTGA > 1/1567676‑1568156 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |