Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,561,389 T→C M138V (ATG→GTG)  unknown ← 3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase, FabA form (EC 4.2.1.59) @ Trans‑2‑decenoyl‑[acyl‑carrier‑protein] isomerase (EC 5.3.3.14)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,561,3890TC100.0% 193.2 / NA 67M138V (ATG→GTG) unknown3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase, FabA form (EC 4.2.1.59) @ Trans‑2‑decenoyl‑[acyl‑carrier‑protein] isomerase (EC 5.3.3.14)
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (31/36);  total (31/36)

TGATTGGGCTGATGATTGCAAAAAAATTAACCAGTTCATTATGAAGATAAAAACACCGAAAAAACAAACCGCACTTTCTTTCAG‑AAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCATGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACACCCCGGCATGACAGGGTCGCCGATAAAGTGGCAGGCAAAGAACGGTAGATCAGGATGAATATCCAACTCGGCTTCAATGTAGCCTTT  >  1/1561143‑1561635
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                      
tGATTGGGCTGATGATTGCAAAAAAATTAACCAGTTCATTATGAAGATAAAAACACCGAAAAAACAAACCGCACTTTCTTTCAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCAcgcg                                                                                                                                                                                                                                                     >  1:551734/1‑251 (MQ=255)
  aTTGGGCTGATGATTGCAAAAAAATTAACCAGTTCATTATGAAGATAAAAACACCGAAAAAACAAACCGCACTTTCTTTCAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGt                                                                                                                                                                                                                                                    <  1:828798/250‑1 (MQ=255)
  aTTGGGCTGATGATTGCAAAAAAATTAACCAGTTCATTATGAAGATAAAAACACCGAAAAAACAAACCGCACTTTCTTTCAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGt                                                                                                                                                                                                                                                    <  1:253292/250‑1 (MQ=255)
          gatgatTGCAAAAAAATTAACCAGTTCATTATGAAGATAAAAACACCGAAAAAACAAACCGCACTTTCTTTCAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTa                                                                                                                                                                                                                                           >  1:55879/1‑251 (MQ=255)
                       aaaTTAACCAGTTCATTATGAAGATAAAAACACCGAAAAAACAAACCGCACTTTCTTTCAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGtt                                                                                                                                                                                                                                            <  1:351658/237‑1 (MQ=255)
                        aaTTAACCAGTTCATTATGAAGATAAAAACACCGAAAAAACAAACCGCACTTTCTTTCAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGa                                                                                                                                                                                                                              >  1:370096/1‑250 (MQ=255)
                         aTTAACCAGTTCATTATGAAGATAAAAACACCGAAAAAACAAACCGCACTTTCTTTCAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGa                                                                                                                                                                                                                              >  1:632094/1‑249 (MQ=255)
                           tAACCAGTTCATTATGAAGATAAAAACACCGAAAAAACAAACCGCACTTTCTTTCAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACttt                                                                                                                                                                                                                          >  1:574170/1‑251 (MQ=255)
                                 gTTCATTATGAAGATAAAAACACCGAAAAAACAAACCGCACTTTCTTTCAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGtt                                                                                                                                                                                                                                            >  1:237505/1‑227 (MQ=255)
                                 gTTCATTATGAAGATAAAAACACCGAAAAAACAAACCGCACTTTCTTTCAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATa                                                                                                                                                                                                                                   <  1:846664/236‑1 (MQ=255)
                                 gTTCATTATGAAGATAAAAACACCGAAAAAACAAACCGCACTTTCTTTCAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTg                                                                                                                                                                                                                     >  1:363781/1‑250 (MQ=255)
                                 gTTCATTATGAAGATAAAAACACCGAAAAAACAAACCGCACTTTCTTTCAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTg                                                                                                                                                                                                                     >  1:528305/1‑250 (MQ=255)
                                      ttATGAAGATAAAAACACCGAAAAAACAAACCGCACTTTCTTTCAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCg                                                                                                                                                                                                               >  1:351226/1‑251 (MQ=255)
                                               tAAAAACACCGAAAAAACAAACCGCACTTTCTTTCAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAAttt                                                                                                                                                                                                      >  1:210210/1‑251 (MQ=255)
                                                aaaaaCACCGAAAAAACAAACCGCACTTTCTTTCAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTg                                                                                                                                                                                                     <  1:251292/251‑1 (MQ=255)
                                                                caaacCGCACTTTCTTTCAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGtt                                                                                                                                                                                                                                            >  1:255557/1‑196 (MQ=255)
                                                                      ccACTTTCTTTCAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCa                                                                                                                                                                               <  1:188304/250‑1 (MQ=255)
                                                                           ttctttcAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAacac                                                                                                                                                                           >  1:183979/1‑250 (MQ=255)
                                                                           ttctttcAGAAAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACAcc                                                                                                                                                                          <  1:248334/251‑1 (MQ=255)
                                                                                    aaaaaaGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCTCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGc                                                                                                                                                                    <  1:864184/247‑1 (MQ=255)
                                                                                    aaaaaaGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGctc                                                                                                                                                                  <  1:360852/249‑1 (MQ=255)
                                                                                    aaaaaaGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGc                                                                                                                                                                    <  1:626137/247‑1 (MQ=255)
                                                                                    aaaaaaGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGc                                                                                                                                                                    <  1:692507/247‑1 (MQ=255)
                                                                                    aaaaaaGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGc                                                                                                                                                                    <  1:494648/247‑1 (MQ=255)
                                                                                             cGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGcc                                                                                                                                                        <  1:217817/251‑1 (MQ=255)
                                                                                             cGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAG‑AACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGccc                                                                                                                                                       <  1:91023/251‑1 (MQ=255)
                                                                                              ggTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGcc                                                                                                                                                              >  1:748810/1‑244 (MQ=255)
                                                                                                             tgtTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACCACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGAccc                                                                                                                                          <  1:767137/249‑1 (MQ=255)
                                                                                                              gtTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAg                                                                                                                                        >  1:110933/1‑250 (MQ=255)
                                                                                                              gtTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAg                                                                                                                                        >  1:475805/1‑250 (MQ=255)
                                                                                                              gtTTTTTAAGACTGCGAATTAGAAACTTGAGGAATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGCCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAg                                                                                                                                        >  1:481637/1‑250 (MQ=255)
                                                                                                                 ttttAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACAcc                                                                                                                                                                          <  1:125332/213‑1 (MQ=255)
                                                                                                                     aaGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTaagaa                                                                                                                                <  1:482639/251‑1 (MQ=255)
                                                                                                                     aaGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTaagaa                                                                                                                                <  1:337517/251‑1 (MQ=255)
                                                                                                                        aCTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTaagaaga                                                                                                                              <  1:186768/250‑1 (MQ=255)
                                                                                                                        aCTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTaagaag                                                                                                                               <  1:748733/249‑1 (MQ=255)
                                                                                                                                               aTCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATg                                                                                                                                                                                                                                              >  1:686570/1‑115 (MQ=255)
                                                                                                                                               aTCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGAcc                                                                                                                                           <  1:480449/214‑1 (MQ=255)
                                                                                                                                                tCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCAt                                                                                                      >  1:681902/1‑250 (MQ=255)
                                                                                                                                                tCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTCTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTc                                                                                                                                                                                                   >  1:786089/1‑157 (MQ=255)
                                                                                                                                                     aaaCAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAAc                                                                                                <  1:363780/251‑1 (MQ=255)
                                                                                                                                                             cGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAacac                                                                                        <  1:128063/251‑1 (MQ=255)
                                                                                                                                                             cGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACAAGGCATCTAAACCCAAacac                                                                                        <  1:320233/251‑1 (MQ=255)
                                                                                                                                                               aCTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGAc                                                                                                                                            <  1:600373/197‑1 (MQ=255)
                                                                                                                                                                       gTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACACCCCGGCATGa                                                                              >  1:14274/1‑251 (MQ=255)
                                                                                                                                                                             tGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACACCCCGGCATGACAGGGt                                                                        <  1:335774/251‑1 (MQ=255)
                                                                                                                                                                              gCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAacac                                                                                        >  1:872839/1‑234 (MQ=255)
                                                                                                                                                                                 gtgtAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACACCCCGGCATGACAGGGTCGc                                                                     >  1:225626/1‑250 (MQ=255)
                                                                                                                                                                                   gtAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTaa                                                                                                                                                                                             >  1:382651/1‑128 (MQ=255)
                                                                                                                                                                                   gtAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGc                                                                                                                                                                    <  1:410310/153‑1 (MQ=255)
                                                                                                                                                                                   gtAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACACCCCGGCATGACAGGGTCGCCGa                                                                  >  1:134418/1‑251 (MQ=255)
                                                                                                                                                                                        tAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACACCCCGGCATGACAGGGTCGCCGATAAAg                                                             >  1:796358/1‑251 (MQ=255)
                                                                                                                                                                                               aCCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACAcc                                                                                                                                                                          <  1:391452/135‑1 (MQ=255)
                                                                                                                                                                                                 cGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAac                                                                                          >  1:615820/1‑213 (MQ=255)
                                                                                                                                                                                                       cttccacttcGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAAcc                                                                                               >  1:68459/1‑202 (MQ=255)
                                                                                                                                                                                                       cttccacttcGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACACCCCGGCATGACAGGGTCGCCGATAAAGTGGCAGGCAAAGAAc                                              <  1:21276/251‑1 (MQ=255)
                                                                                                                                                                                                       cttccacttcGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACACCCCGGCATGACAGGGTCGCCGATAAAGTGGCAGGCAAAGAAc                                              <  1:137183/251‑1 (MQ=255)
                                                                                                                                                                                                               tcGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACACCCCGGCATGACAGGGTCGCCGATAAAGTGGCAGGCAAAGAACGGTAGATc                                      <  1:303387/251‑1 (MQ=255)
                                                                                                                                                                                                                     tCTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACACCCCGGCATGACAGGGTCGCCGATAAAGTGGCAGGCAAAGAACGGTAGATCAGGAt                                 <  1:869679/250‑1 (MQ=255)
                                                                                                                                                                                                                      cTGCCATGCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACACCCCGGCATGACAGGGTCGCCGATAAAGTGGCAGGCAAAGAACGGTAGATc                                      <  1:98154/244‑1 (MQ=255)
                                                                                                                                                                                                                             gCCCATGACTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACACCCCGGCATGACAGGGTCGCCGATAAAGTGGCAGGCAAAGAACGGTAGATCAGGATGAat                             >  1:300685/1‑246 (MQ=255)
                                                                                                                                                                                                                                    aCTAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTaagaag                                                                                                                               >  1:81852/1‑141 (MQ=255)
                                                                                                                                                                                                                                      tAATTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACACCCCGGCATGACAGGGTCGCCGATAAAGTGGCAGGCAAAGAACGGTAGATCAGGATGAATATCCAACTCGGCtt               <  1:98218/251‑1 (MQ=255)
                                                                                                                                                                                                                                       aaTTTGCGGTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAAcc                                                                                               >  1:229771/1‑170 (MQ=255)
                                                                                                                                                                                                                                              ggTTAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACACCCCGGCATGACAGGGTCGCCGATAAAGTGGCAGGCAAAGAACGGTAGATCAGGATGAATATCCAACTCGGCTTCAATGTAg       >  1:311398/1‑251 (MQ=255)
                                                                                                                                                                                                                                                ttAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACGCCCCGGCATGACAGGGTCGCCGATAAAGTGGCAGGCAAAGAACGGTAGATCAGGATGAATATCCAACTCGGCTTCAATGTAGcc     <  1:12542/251‑1 (MQ=255)
                                                                                                                                                                                                                                                 tAATCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACACCCCGGCATGACAGGGTCGCCGATAAAGTGGCAGGCAAAGAACGGTAGATCAGGATGAATATCCAACTCGGCTTCAATGTAGCCt    <  1:317718/251‑1 (MQ=255)
                                                                                                                                                                                                                                                   aTCACGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACACCCCGGCATGACAGGGTCGCCGATAAAGTGGCAGGCAAAGAACGGTAGATCAGGATGAATATCCAACTCGGCTTCAATGTAGCCttt  >  1:495307/1‑251 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                      
TGATTGGGCTGATGATTGCAAAAAAATTAACCAGTTCATTATGAAGATAAAAACACCGAAAAAACAAACCGCACTTTCTTTCAG‑AAAAAGTACGGTGAAAAATTTCAGTGTTTTTTAAGACTGCGAATTAGAAACTTGAGGTATCTTGAAACAAGCCGACTTTCAAGTCCGTTGCGGTGTAAATAACACGACCGTCCACTTCCACTTCGCCGTCTGCCATGCCCATGACTAATTTGCGGTTAATCATGCGTTTCATGTTAATGCGATAAACGACTTTTTTTGCCGTCGGGAGAATTTGTCCGGTAAATTTCACTTCGCCAACACCTAAGGCTCTGCCTTTGCCCTTGCCGCCGACCCAGCCTAAGAAGAAGCCGACTAATTGCCACATGGCATCTAAACCCAAACACCCCGGCATGACAGGGTCGCCGATAAAGTGGCAGGCAAAGAACGGTAGATCAGGATGAATATCCAACTCGGCTTCAATGTAGCCTTT  >  1/1561143‑1561635

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑