Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 93,988 G→C Q291E (CAA→GAA)  unknown ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*193,9880GC100.0% 241.3 / NA 81Q291E (CAA→GAA) unknownhypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (56/25);  total (56/25)

CGTTATAGACTTTAAACGGGGCTTTAATCCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCATGGCGTCCGCTCGAATCCGGCAACTCTTTAACCCGCCAATCCAAATCGTTGTGATAGCCGCTCGCCGGGATAATTAACCATTTTTGAGCATTAATGGTTAAGATTGTGCGCGGGATGATGCCGTACATGTTTACATGATAACGGTCGGGTACAATGCCCAAG‑CGGGCGTAAGTATCATTGCGCAAATGCGCGGTGATGACGTTAGGATTGGGCATCACCACCTGCCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCGGCAGTATGCCCGACAGAGCGGTCTAACATTGCCCCGGTATTAGCGCCGAAAAAATGCA  >  1/93748‑94224
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                             
cgTTATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATg                                                                                                                                                                                                                                     >  1:569211/1‑251 (MQ=255)
  ttATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATg                                                                                                                                                                                                                                     >  1:556401/1‑249 (MQ=255)
  ttATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGt                                                                                                                                                                                                                                   >  1:874059/1‑251 (MQ=255)
  ttATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGt                                                                                                                                                                                                                                   >  1:107745/1‑251 (MQ=255)
         cTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGTATAATTAACCATTTTTCACCATTAATGGTTAAGAtt                                                                                                                                                                                                                            >  1:785286/1‑251 (MQ=255)
           ttAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATtgt                                                                                                                                                                                                                          >  1:218689/1‑251 (MQ=255)
            tAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATtgtg                                                                                                                                                                                                                         >  1:801348/1‑251 (MQ=255)
             aaaCGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATtgtg                                                                                                                                                                                                                         >  1:176115/1‑250 (MQ=255)
                  gagttttAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGAt                                                                                                                                                                                                                             >  1:98515/5‑241 (MQ=255)
                  gagttttAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCggg                                                                                                                                                                                                                   >  1:75590/5‑251 (MQ=255)
                           tgcgctttttATCACTGGGGTAGGGGCCCAG‑CCGTTTTTAAAATAAGGCC‑TCCCGGGCTTAAACTTAATTAAAAAAATACCCCTGATGCGCTCCCACCCTTTCCCCCAAAAGCCGATAGGCGACCCCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGc                                                                                                                                                                                                            <  1:827616/242‑1 (MQ=255)
                                 aTTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATAc                                                                                                                                                                                                       >  1:685639/1‑248 (MQ=255)
                                 aTTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATAc                                                                                                                                                                                                       >  1:887061/1‑248 (MQ=255)
                                 aTTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATg                                                                                                                                                                                                    >  1:226224/1‑251 (MQ=255)
                                 aTTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATg                                                                                                                                                                                                    >  1:797499/1‑251 (MQ=255)
                                 aTTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATAACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATg                                                                                                                                                                                                    >  1:463175/1‑251 (MQ=255)
                                      tCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTa                                                                                                                                                                                                >  1:285966/1‑250 (MQ=255)
                                         cTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATg                                                                                                                                                                                            >  1:866194/1‑251 (MQ=255)
                                           gCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGAt                                                                                                                                                                                          >  1:714847/1‑251 (MQ=255)
                                              gTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATaa                                                                                                                                                                                        >  1:701261/1‑250 (MQ=255)
                                                    gACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGga                                                                                                                                                                                                                  >  1:315150/1‑218 (MQ=255)
                                                              gTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATg                                                                                                                                                                                                    >  1:506817/1‑222 (MQ=255)
                                                                    aaaTAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTcc                                                                                                                                                                                  >  1:612582/1‑234 (MQ=255)
                                                                          tGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGt                                                                                                                                                           >  1:583020/1‑251 (MQ=255)
                                                                                 ccGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGTCGATAGGCGCCACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATc                                                                                                                                                    <  1:388646/251‑1 (MQ=255)
                                                                                    gCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGAt                                                                                                                                                                                                                             >  1:775227/1‑176 (MQ=255)
                                                                                    gCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCAtt                                                                                                                                                 >  1:13046/1‑251 (MQ=255)
                                                                                                             cccTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGtt                                                                                                                         >  1:656424/1‑251 (MQ=255)
                                                                                                                       cccccaccccttcccccaaaaGCCGATAGGCGACCCCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGc                                                                                                               <  1:691610/232‑1 (MQ=255)
                                                                                                                       cccccaccccttcccccaaaaGCCGATAGGCGACCCCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGc                                                                                                               <  1:587797/232‑1 (MQ=255)
                                                                                                                       cccccATCCCTTACCCCAAAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGc                                                                                                               <  1:326713/248‑1 (MQ=255)
                                                                                                                         gCCATCACTTACTCCACAAGCCGACAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGCTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTacgt                                                                                                                                                       >  1:785492/1‑206 (MQ=255)
                                                                                                                              cACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGAt                                                                                                                                                                                                                             >  1:253017/1‑135 (MQ=255)
                                                                                                                              cACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACAt                                                                                                                                                                                             >  1:69805/1‑167 (MQ=255)
                                                                                                                              cACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACgg                                                                                                                                                                                     >  1:93657/1‑175 (MQ=255)
                                                                                                                               cttccccccccaacccGATGGGCGACACCGTGGCGTCCACTGAAATCCGGCACCTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATcactac                                                                                                       <  1:388168/237‑4 (MQ=255)
                                                                                                                                cTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATcacta                                                                                                        >  1:719373/1‑247 (MQ=255)
                                                                                                                                 ttcccccaaaaGCCGATAGGCGACCCCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATcactactt                                                                                                     <  1:528128/242‑6 (MQ=255)
                                                                                                                                           aGCCGATGGGCGCCACCGTGGCGTCCACTGGAATCCGGCAACTCTTGACCCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGAt                                                                                                                                                                                                                             <  1:901653/122‑1 (MQ=255)
                                                                                                                                            gCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGtt                                                                                          >  1:734160/1‑251 (MQ=255)
                                                                                                                                             ccGATAGGCGACCCCGTGGCGTCCACTGGAATCCGGCAACTCTTGACCCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATcac                                                                                                          <  1:296831/234‑1 (MQ=255)
                                                                                                                                                aTAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGt                                                                                      >  1:535475/1‑251 (MQ=255)
                                                                                                                                                  aGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATGccaagt                                                                                                                                                                   >  1:266142/1‑169 (MQ=255)
                                                                                                                                                  aGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATg                                                                                                                                        >  1:761762/1‑199 (MQ=255)
                                                                                                                                                  aGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGAt                                                                                                                    <  1:819817/219‑1 (MQ=255)
                                                                                                                                                  aGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGttt                                                                                    >  1:708082/1‑251 (MQ=255)
                                                                                                                                                  aGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGttt                                                                                    >  1:475453/1‑251 (MQ=255)
                                                                                                                                                       acacCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGAt                                                                               >  1:60546/1‑251 (MQ=255)
                                                                                                                                                          ccgtGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGAt                                                                                                                                                                                                                             >  1:646513/4‑107 (MQ=255)
                                                                                                                                                                 gtccactggAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAg                                                                      >  1:96831/9‑250 (MQ=255)
                                                                                                                                                                   ccactggAATCCGGCAACTCTTGAACCCGACAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGca                                                                    >  1:642226/7‑250 (MQ=255)
                                                                                                                                                                    cactggAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATcactacttgtccc                                                                                                >  1:514740/6‑211 (MQ=255)
                                                                                                                                                                    cactggAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGcaca                                                                  >  1:30108/6‑251 (MQ=255)
                                                                                                                                                                      ctggAATCCGGCAACTCTTGACCCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATcactacttgtcc                                                                                                 <  1:207562/215‑10 (MQ=255)
                                                                                                                                                                      ctggAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCCCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATcactac                                                                                                       >  1:728011/4‑209 (MQ=255)
                                                                                                                                                                           aTCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCgg                                                           >  1:223497/1‑251 (MQ=255)
                                                                                                                                                                                    ctcttgaccccGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGc                                                                                                               <  1:142639/182‑1 (MQ=255)
                                                                                                                                                                                    ctctTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGc                                                                                                                                                                                                            <  1:397686/98‑1 (MQ=255)
                                                                                                                                                                                    ctctTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGAt                                                                                                                    >  1:779684/1‑185 (MQ=255)
                                                                                                                                                                                    ctctTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCGGCAGTATGc                                                   >  1:21997/1‑250 (MQ=255)
                                                                                                                                                                                     tctTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCGGCAGTATGccc                                                 <  1:468642/251‑1 (MQ=255)
                                                                                                                                                                                      cttgaaCCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCGGCAGTATGccct                                                <  1:150248/247‑2 (MQ=255)
                                                                                                                                                                                         gaaCCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATcactacttgtc                                                                                                  >  1:800375/2‑190 (MQ=255)
                                                                                                                                                                                          aaCCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCGGCAGTATGCCCTACag                                            <  1:58847/251‑1 (MQ=255)
                                                                                                                                                                                                  aaTCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCGGCAGTATGCCCTACAGAGCGGt                                      >  1:202034/1‑249 (MQ=255)
                                                                                                                                                                                                   aTCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCGGCAGTATGCCCTACag                                            <  1:477967/242‑1 (MQ=255)
                                                                                                                                                                                                       aaaTCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATg                                                                                                                                                                                                                                     <  1:707325/54‑1 (MQ=255)
                                                                                                                                                                                                       aaaTCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCGGCAGTATGCCCTACAGAGCGGTCTAACAt                               <  1:654953/251‑1 (MQ=255)
                                                                                                                                                                                                       aaaTCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCGGCAGTATGCCCTACAGAGCGGTCTAACAt                               <  1:417969/251‑1 (MQ=255)
                                                                                                                                                                                                       aaaTCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCGGCAGTATGCCCTACAGAGCGGTCTAACAt                               <  1:401937/251‑1 (MQ=255)
                                                                                                                                                                                                          tCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGcgtacgta                                                                                                                                                      <  1:821997/129‑1 (MQ=255)
                                                                                                                                                                                                              tgtgATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATg                                                                                                                                                                                                                                     <  1:750780/47‑1 (MQ=255)
                                                                                                                                                                                                              tgtgATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGc                                                                                                                                                                                                            >  1:319633/1‑72 (MQ=255)
                                                                                                                                                                                                               gtgATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCGGCAGTATGCCCTACAGAGCGGTCTAACATTGCACCgg                       >  1:559469/1‑251 (MQ=255)
                                                                                                                                                                                                                tgATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCGGCAGTATGCCCTACAGAGc                                         <  1:480465/232‑1 (MQ=255)
                                                                                                                                                                                                                       cGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCGGCAGTATGCCCTACAGAGCGGTCTAACATTGCACCGGTAttggtg               <  1:403740/251‑5 (MQ=255)
                                                                                                                                                                                                                           cGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCGGCAGTATGCCCTACAGAGCGGTCTAACATTGCACCGGTATTGGTGCCGa           >  1:228883/1‑251 (MQ=255)
                                                                                                                                                                                                                                   tAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCGGCAGTATGCCCTACag                                            >  1:457316/1‑210 (MQ=255)
                                                                                                                                                                                                                                    aaTTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATcac                                                                                                          >  1:244312/1‑147 (MQ=255)
                                                                                                                                                                                                                                    aaTTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCGGCAGTATGCCCTACAGAGCGGTCTAACATTGCACCGGTATTGGTGCCGAAAAAATGCa  >  1:716131/1‑251 (MQ=255)
                                                                                                                                                                                                                                     aTTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGAt                                                                                                                    >  1:613611/1‑136 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                             
CGTTATAGACTTTAAACGGGGCTTTAATCCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCATGGCGTCCGCTCGAATCCGGCAACTCTTTAACCCGCCAATCCAAATCGTTGTGATAGCCGCTCGCCGGGATAATTAACCATTTTTGAGCATTAATGGTTAAGATTGTGCGCGGGATGATGCCGTACATGTTTACATGATAACGGTCGGGTACAATGCCCAAG‑CGGGCGTAAGTATCATTGCGCAAATGCGCGGTGATGACGTTAGGATTGGGCATCACCACCTGCCCCAAGGTTGAGTTTGAGATAGCGGTTAGCACATCATCGGCAGTATGCCCGACAGAGCGGTCTAACATTGCCCCGGTATTAGCGCCGAAAAAATGCA  >  1/93748‑94224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑