Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 93,914 C→G S315S (TCG→TCC)  unknown ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*193,9140CG100.0% 197.8 / NA 66S315S (TCG→TCC) unknownhypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (50/16);  total (50/16)

TAAATCAAGGTAAAAATTGGGCGTGATATAACCGCCCGATTGGTGCGTAACATCCGCTTCTTGATTGCCGATAAAATGCGCGTTATAGACTTTAAACGGGGCTTTAATCCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCATGGCGTCCGCTCGAATCCGGCAACTCTTTAACCCGCCAATCCAAATCGTTGTGATAGCCGCTCGCCGGGATAATTAACCATTTTTGAGCATTAATGGTTAAGATTGTGCGCGGGATGATGCCGTACATGTTTACATGATAACGGTCGGGTACAATGCCCAAG‑CGGGCGTAAGTATCATTGCGCAAATGCGCGGTGATGACGTTAGGATTGGGCATCACCACCTGCCCCAAGGTTGAGTTTGAGAT  >  1/93668‑94147
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                          
aaaaTCCAGGTAAAAATTCGGCGTGATATAACCGCCCGATTGGCGGGTAACATCCGCTTCGAGATTGCCGATAAACTGCGCGTTATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTCCCGGCGTTAAGCTTAGTT‑AAAAAATACCCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAAt                                                                                                                                                                                                                                        <  1:665962/250‑1 (MQ=255)
 aaaTCCAGGTAAAAATTCGGCGTGATATACCCGCCCGATTGGCGGGTAACATCCGCTTCGAGATTGCCGATAAACTGCGCGTTATAGACTTTAAACGGATTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTCCCGGCGTTAAGCTTAGTT‑AAAAAATACCCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATc                                                                                                                                                                                                                                       <  1:29795/251‑1 (MQ=255)
     ccaGGTAAAAATTCGGCGTGATATAACCGCCCGATTGGCGGGTAACATCCGCTTCGAGATTGCCGATAAACTGCGCGTTATAGACTTAAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTA‑AAAAAATACCCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGc                                                                                                                                                                                                                                   <  1:302633/249‑1 (MQ=255)
                    gCGTGATATAACCGCCCGATTGGCGGGTAACATCCGCTTCGAGATTGCCGATAAACTGCGCGTTATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGGGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTTAACCCg                                                                                                                                                                                                                     >  1:295843/1‑250 (MQ=255)
                       tGATATAACCGCCCGATTGGCGGGTAACATCCGCTTCGAGATTGCCGATAAACTGCGCGTTATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCaa                                                                                                                                                                                                                 >  1:225424/1‑251 (MQ=255)
                        gATATAACCGCCCGATTGGCGGGTAACATCCGCTTCGAGATTGCCGATAAACTGCGCGTTATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCaaa                                                                                                                                                                                                                >  1:11273/1‑250 (MQ=255)
                        gATATAACCGCCCGATTGGCGGGTAACATCCGCTTCGAGATTGCCGATAAACTGCGCGTTATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCaa                                                                                                                                                                                                                 >  1:655130/1‑250 (MQ=255)
                         atatAACCGCCCGATTGGCGGGTAACATCCGCTTCGAGATTGCCGATAAACTGCGCGTTATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGAGACCAGTCCGGGTTT‑AAAAAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACCGGAATCCGGCAACTCTTGAACCCCCCAAt                                                                                                                                                                                                                >  1:568145/1‑250 (MQ=255)
                           ataACCGCCCGATTGGCGGGTAACATCCGCTTCGAGATTGCCGATAAACTGCGCGTTATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAAc                                                                                                                                                                                                                        >  1:289341/1‑240 (MQ=255)
                                                        cttcgagATTGCCGATAAACTGCGCGTTATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATa                                                                                                                                                                                >  1:114020/7‑251 (MQ=255)
                                                                   ccGATAAACTGCGCGTTATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATACCCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAAc                                                                                                                                                                                                                                <  1:509025/192‑1 (MQ=255)
                                                                   ccGATAAACTGCGCGTTATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAAc                                                                                                                                                                                                                        >  1:735866/1‑200 (MQ=255)
                                                                     gATAAACTGCGCGTTATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCg                                                                                                                                                                                                        >  1:96294/1‑214 (MQ=255)
                                                                                cgTTATAGTCTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATACCCCTGATGCGCGGCCATCACTTCCTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAActc                                                                                                                                                                                                                              <  1:335901/181‑1 (MQ=255)
                                                                                cgTTATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATg                                                                                                                                                        >  1:569211/1‑251 (MQ=255)
                                                                                  ttATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATg                                                                                                                                                        >  1:556401/1‑249 (MQ=255)
                                                                                  ttATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGt                                                                                                                                                      >  1:874059/1‑251 (MQ=255)
                                                                                  ttATAGACTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGt                                                                                                                                                      >  1:107745/1‑251 (MQ=255)
                                                                                         cTTTAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGTATAATTAACCATTTTTCACCATTAATGGTTAAGAtt                                                                                                                                               >  1:785286/1‑251 (MQ=255)
                                                                                           ttAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATtgt                                                                                                                                             >  1:218689/1‑251 (MQ=255)
                                                                                            tAAACGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATtgtg                                                                                                                                            >  1:801348/1‑251 (MQ=255)
                                                                                             aaaCGGAGTTTTAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATtgtg                                                                                                                                            >  1:176115/1‑250 (MQ=255)
                                                                                                  gagttttAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATaacc                                                                                                                                                                                             >  1:644092/5‑193 (MQ=255)
                                                                                                  gagttttAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGAt                                                                                                                                                >  1:98515/5‑241 (MQ=255)
                                                                                                  gagttttAATGCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCggg                                                                                                                                      >  1:75590/5‑251 (MQ=255)
                                                                                                           tgcgctttttATCACTGGGGTAGGGGCCCAG‑CCGTTTTTAAAATAAGGCC‑TCCCGGGCTTAAACTTAATTAAAAAAATACCCCTGATGCGCTCCCACCCTTTCCCCCAAAAGCCGATAGGCGACCCCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGc                                                                                                                               <  1:827616/242‑1 (MQ=255)
                                                                                                               ccATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATACCCCTGATGCGCTGCCATCACTTACCCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAAc                                                                                                                                                                                                                        <  1:251095/156‑1 (MQ=255)
                                                                                                                 aTTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATAc                                                                                                                          >  1:887061/1‑248 (MQ=255)
                                                                                                                 aTTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATAc                                                                                                                          >  1:685639/1‑248 (MQ=255)
                                                                                                                 aTTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATg                                                                                                                       >  1:226224/1‑251 (MQ=255)
                                                                                                                 aTTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATg                                                                                                                       >  1:797499/1‑251 (MQ=255)
                                                                                                                 aTTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATAACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATg                                                                                                                       >  1:463175/1‑251 (MQ=255)
                                                                                                                   ttATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATcc                                                                                                                                                                                                              >  1:436808/1‑162 (MQ=255)
                                                                                                                      tCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTa                                                                                                                   >  1:285966/1‑250 (MQ=255)
                                                                                                                         cTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATg                                                                                                               >  1:866194/1‑251 (MQ=255)
                                                                                                                           gCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGAt                                                                                                             >  1:714847/1‑251 (MQ=255)
                                                                                                                              gTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATaa                                                                                                           >  1:701261/1‑250 (MQ=255)
                                                                                                                                    gACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGga                                                                                                                                     >  1:315150/1‑218 (MQ=255)
                                                                                                                                              gTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATg                                                                                                                       >  1:506817/1‑222 (MQ=255)
                                                                                                                                                    aaaTAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTcc                                                                                                     >  1:612582/1‑234 (MQ=255)
                                                                                                                                                          tGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGt                                                                              >  1:583020/1‑251 (MQ=255)
                                                                                                                                                                 ccGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGTCGATAGGCGCCACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATc                                                                       <  1:388646/251‑1 (MQ=255)
                                                                                                                                                                    gCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGAt                                                                                                                                                >  1:775227/1‑176 (MQ=255)
                                                                                                                                                                    gCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCAtt                                                                    >  1:13046/1‑251 (MQ=255)
                                                                                                                                                                                             cccTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGtt                                            >  1:656424/1‑251 (MQ=255)
                                                                                                                                                                                                       cccccaccccttcccccaaaaGCCGATAGGCGACCCCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGc                                  <  1:691610/232‑1 (MQ=255)
                                                                                                                                                                                                       cccccaccccttcccccaaaaGCCGATAGGCGACCCCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGc                                  <  1:587797/232‑1 (MQ=255)
                                                                                                                                                                                                       cccccATCCCTTACCCCAAAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGc                                  <  1:326713/248‑1 (MQ=255)
                                                                                                                                                                                                         gCCATCACTTACTCCACAAGCCGACAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGCTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTacgt                                                                          >  1:785492/1‑206 (MQ=255)
                                                                                                                                                                                                              cACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGAt                                                                                                                                                >  1:253017/1‑135 (MQ=255)
                                                                                                                                                                                                              cACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACAt                                                                                                                >  1:69805/1‑167 (MQ=255)
                                                                                                                                                                                                              cACTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACgg                                                                                                        >  1:93657/1‑175 (MQ=255)
                                                                                                                                                                                                               cttccccccccaacccGATGGGCGACACCGTGGCGTCCACTGAAATCCGGCACCTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATcactac                          <  1:388168/237‑4 (MQ=255)
                                                                                                                                                                                                                cTTACTCCACAAGCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATcacta                           >  1:719373/1‑247 (MQ=255)
                                                                                                                                                                                                                 ttcccccaaaaGCCGATAGGCGACCCCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATcactactt                        <  1:528128/242‑6 (MQ=255)
                                                                                                                                                                                                                           aGCCGATGGGCGCCACCGTGGCGTCCACTGGAATCCGGCAACTCTTGACCCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGAt                                                                                                                                                <  1:901653/122‑1 (MQ=255)
                                                                                                                                                                                                                            gCCGATAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGtt             >  1:734160/1‑251 (MQ=255)
                                                                                                                                                                                                                             ccGATAGGCGACCCCGTGGCGTCCACTGGAATCCGGCAACTCTTGACCCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATcac                             <  1:296831/234‑1 (MQ=255)
                                                                                                                                                                                                                                aTAGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGt         >  1:535475/1‑251 (MQ=255)
                                                                                                                                                                                                                                  aGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATGccaagt                                                                                      >  1:266142/1‑169 (MQ=255)
                                                                                                                                                                                                                                  aGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATg                                                           >  1:761762/1‑199 (MQ=255)
                                                                                                                                                                                                                                  aGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGAt                                       <  1:819817/219‑1 (MQ=255)
                                                                                                                                                                                                                                  aGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGttt       >  1:475453/1‑251 (MQ=255)
                                                                                                                                                                                                                                  aGGCGACACCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGttt       >  1:708082/1‑251 (MQ=255)
                                                                                                                                                                                                                                       acacCGTGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGATTGTGCGCGGGATGATGCCATACATGTTTACATGATAACGGTCCGGCACAATG‑CCAAGTCGGGCGTACGTATCATTGCGTAAATGTGCGGTAATCACGTTAGGATTAGGCATCACTACTTGTCCCAAGGTTGAGTTTGAGAt  >  1:60546/1‑251 (MQ=255)
                                                                                                                                                                                                                                          ccgtGGCGTCCACTGGAATCCGGCAACTCTTGAACCCGCCAATCCAAATCGTTGTGATAACCGCTCGCCGGGATAATTAACCATTTTTCACCATTAATGGTTAAGAt                                                                                                                                                >  1:646513/4‑107 (MQ=255)
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                          
TAAATCAAGGTAAAAATTGGGCGTGATATAACCGCCCGATTGGTGCGTAACATCCGCTTCTTGATTGCCGATAAAATGCGCGTTATAGACTTTAAACGGGGCTTTAATCCGCCATTTATCACTGCGGTAGGTGACCAGTCCGGTTTT‑AAATAATGCCGTACCGGCGTTAAGCTTAGTT‑AAAAAATAACCCTGATGCGCTGCCATCACTTACTCCACAAGCCGATAGGCGACACCATGGCGTCCGCTCGAATCCGGCAACTCTTTAACCCGCCAATCCAAATCGTTGTGATAGCCGCTCGCCGGGATAATTAACCATTTTTGAGCATTAATGGTTAAGATTGTGCGCGGGATGATGCCGTACATGTTTACATGATAACGGTCGGGTACAATGCCCAAG‑CGGGCGTAAGTATCATTGCGCAAATGCGCGGTGATGACGTTAGGATTGGGCATCACCACCTGCCCCAAGGTTGAGTTTGAGAT  >  1/93668‑94147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑