| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,487,905 | A→G | C234R (TGC→CGC) | unknown ← | Iron compound ABC transporter, permease protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,487,905 | 0 | A | G | 100.0% | 177.5 / NA | 63 | C234R (TGC→CGC) | unknown | Iron compound ABC transporter, permease protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (27/36); total (27/36) | |||||||||||
AGGCAGCTCAATGTCGGCAATGGTGCGCGCTAAAGTGTCCGTTAATAACAGAAAAGCGGCGCCGAGAAGCAAAGATGTCGGAAGCAACAGGATAAAATTGGCGCCCACCAATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCACGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAGGATCGGCGAGAATTTTCAACAACGAAATCCCCGCGCCAAGCAACGAACCGATGGC‑AATTCCCGATAATACGAGAACGAGAAT > 1/1487660‑1488151 | agGCAGCTCAATGTCGGCAACGGTGCGCGCTAAAGTGTCCGTTAATAACAGAAAAGCGGCGCCGAGAAGCAAAGATGTCGGAAGCAACAGGATAAAATTGGCGCCCACCAATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTgcgcgc < 1:57351/249‑1 (MQ=255) gCTCAATGTCGGCAACGGTGCGCGCTAAAGTGTCCGTTAATAACAGAAAAGCGGCGCCGAGAAGCAAAGATGTCGGAAGCAACAGGATAAAATTGGCGCCCACCAATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTgcgcgc < 1:786637/244‑1 (MQ=255) cTCAATGTCGGCAACGGTGCGCGCTAAAGTGTCCGTTAATAACAGAAAAGCGGCGCCGAGAAGCAAAGATGTCGGAAGCAACAGGATAAAATTGGCGCCCACCAATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGcttcttctt < 1:584690/251‑1 (MQ=255) gTTAATAACAGAAAAGCGGCGCCGAGAAGCAAAGATGTCGGAAGCAACAGGATAAAATTGGCGCCCACCAATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAg > 1:39087/1‑251 (MQ=255) taaCAGAAAAGCGGCGCCGAGAAGCAAAGATGTCGGAAGCAACAGGATAAAATTGGCGCCCACCAATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTaaaa > 1:103805/1‑251 (MQ=255) aaaaGCGGCGCCGAGAAGCAAAGATGTCGGAAGCAACAGGATAAAATTGGCGCCCACCAATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAg < 1:303352/249‑1 (MQ=255) ccGAGAAGCAAAGATGTCGGAAGCAACAGGATAAAATTGGCGCCCACCAATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATAc < 1:576095/250‑1 (MQ=255) ccGAGAAGCAAAGATGTCGGAAGCAACAGGATAAAATTGGCGCCCACCAATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATAc < 1:262379/250‑1 (MQ=255) ccGAGAAGCAAAGATGTCGGAAGCAACAGGATAAAATTGGCGCCCACCAATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATAc < 1:409892/250‑1 (MQ=255) cAACAGGATAAAATTGGCGCCCACCAATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAAt < 1:609297/240‑1 (MQ=255) aaaTTGGCGCCCACCAATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAAt < 1:288924/204‑1 (MQ=255) ggCGCCCACCAATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAacac < 1:6431/243‑1 (MQ=255) caccaATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCt < 1:489172/241‑1 (MQ=255) ccaATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCGCTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATAc < 1:901874/204‑1 (MQ=255) ccaATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAGAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATg > 1:49265/1‑251 (MQ=255) ccaATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTaaag > 1:180875/1‑159 (MQ=255) ccaATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAg < 1:705723/193‑1 (MQ=255) ccaATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATaa > 1:796587/1‑214 (MQ=255) aCGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTa < 1:116277/251‑1 (MQ=255) ggCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATAc < 1:80409/194‑1 (MQ=255) ggCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTaaaa > 1:395918/1‑249 (MQ=255) gCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGc < 1:741361/250‑1 (MQ=255) atGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAgcgg > 1:208346/1‑180 (MQ=255) ccAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGGTTTCTAG‑TAG‑CCaa > 1:421078/1‑251 (MQ=255) ccAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCGTCCTAG‑TAG‑ccca > 1:617665/1‑249 (MQ=255) ccAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAAATTCCtaataaccca > 1:218470/1‑243 (MQ=255) aCCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATgg < 1:622848/250‑1 (MQ=255) gATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAaca < 1:481924/191‑1 (MQ=255) gATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAAATTCCTCG‑TAG‑CCaaaaaaaaaaggaaaggaggt > 1:130359/1‑235 (MQ=255) gATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGGTAAGCTTCCTAG‑TAG‑CCAAAAAAG‑AAAGGAAGGCAggt > 1:901027/1‑249 (MQ=255) gATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGCTAAGCCTCCTAGACGG‑CCAAAAA‑T‑AATGGAAGGcgggt > 1:606069/1‑247 (MQ=255) ccTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTTAAATTTCTAT‑TAG‑CCaaaaaatctttgtcttataaacaattc > 1:626432/1‑228 (MQ=255) cTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTTAGCTTCCTTG‑TAG‑CCcaaaaaa > 1:120183/1‑227 (MQ=255) cTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGT‑CGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAACTTCCCTG‑GAG‑CCCAAAAAA‑AATAGAAGGCAGGTGGGGaaaaa > 1:147409/1‑250 (MQ=255) tGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAg < 1:642634/251‑1 (MQ=255) gTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAg > 1:231836/1‑140 (MQ=255) gTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATAc > 1:278087/1‑151 (MQ=255) gTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATc > 1:625752/1‑165 (MQ=255) gTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGCTAAGCATTCTCG‑AAGTCCAAAAA‑A‑AATGGAATGCAGTTGGGTAAAAgg > 1:696809/1‑251 (MQ=255) tAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAgg < 1:647416/250‑1 (MQ=255) aaTAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAgg < 1:380430/249‑1 (MQ=255) acacCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTGAGCTTCCGAA‑AAC‑CCAAAAAATAAATGGAAGTCAGTTGGGTAAAAgaataggg > 1:808888/1‑244 (MQ=255) ccGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTaaag < 1:45650/96‑1 (MQ=255) gCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGc < 1:259803/185‑1 (MQ=255) ggtggtAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGc > 1:255751/1‑82 (MQ=255) ggtggtAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAGGATCGGCGAGAATTTTCAACAACGAAATc < 1:331417/250‑1 (MQ=255) ggtggtAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAGGATCGGCGAGAATTTTCAACAACGAAATc < 1:618309/250‑1 (MQ=255) ggtggtAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAGGATCGGCGAGAATTTTCAACAACGAAATc < 1:598018/250‑1 (MQ=255) gtggtAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGTCAACGAAGTTAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGGTAATCTTTCTTC‑TAA‑CCAAAAAAA‑AATGTAGGGGAGTTGGGTAAAAAGATAGGCGCGAAtttttcaaaaccaaatac > 1:745556/1‑236 (MQ=255) ggtAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTTG‑TAG‑CCAAAAAAT‑AAAGGAAAGCAGGTGGGGTAAAGGAACGGCGAGAAATTTCAACAACGAAATcccc > 1:484582/1‑250 (MQ=255) taatCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAg < 1:750352/167‑1 (MQ=255) taatCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAGGATCGGCGAGAATTTTCAACAACGAAATCCCCGCGCTAAGc < 1:367071/251‑1 (MQ=255) aatCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATgg < 1:860613/158‑1 (MQ=255) aaaaTGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAGGATCGGCGAGAATTTTCAACAACGAAATCCCCGCGCTAAGCAACGa < 1:372996/251‑1 (MQ=255) aaaTGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCCTG‑TAG‑GCAAAAAGT‑AATGGAAGGCAGGTGGGGAAAAGGATCGGCGAGAATTTTTAAAAACGAAATACCCGCGCTAAGCAACGaa > 1:577612/1‑251 (MQ=255) gTACGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAGGATCGGCGAGAATTTTCAACAACGAAATCCCCGCGCTAAGCAACGAACCGATGGC‑AATTCCCGATAATac < 1:875658/250‑1 (MQ=255) cGCCAAGGTTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAgg < 1:431242/178‑1 (MQ=255) cGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAGGATCGGCGAGAATTTTCAACAACGAAATccc < 1:358352/208‑1 (MQ=255) cGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAGGATCGGCGAGAATTTTCAACAACGAAATCCCCGCGCTAAGCAACGAACCGATGGC‑AATTCCCGat < 1:612805/242‑1 (MQ=255) cGCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAAA‑AAAGGAAGGCAGTTGGGTAAAAAGAACGGCGAGAAATTTCAACAACGAAAACCCCCCGCCAAGCAAACAACCGATGGC‑AAATCCCCACAATaagaga > 1:219842/1‑251 (MQ=255) gCCAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAGGATCGGCGAGAATTTTCAACAACGAAATCCCCGCGCTAAGCAACGAAc < 1:604124/224‑1 (MQ=255) ccAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAGGATCGGCGAGAATTTTCAACAACGAAATCCCCGCGCTAAGCAACGAACCGATGGC‑AATTCCCGATAATacgagaa < 1:509784/250‑1 (MQ=255) ccAAGGCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAACTTCCTAG‑TAG‑CCAAAAAAA‑AAAGGAAGGCAGGTGGGGAAAAAGAACGGCGAGAAATTTTAACAAAGAAAAACCCCCGCCAAGCAACGAACCCATGGCAAATTCCC‑ATAAAacgagaaa > 1:662844/1‑250 (MQ=255) ggCTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAgg < 1:596210/172‑1 (MQ=255) cTGCGCGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAGGATCGGCGAGAATTTTCAACAACGAAATCCCCGCGCTAAGCAACGAACCGATGGC‑AATTCCCGATAATACGAGAACGAGAAt < 1:355704/251‑1 (MQ=255) | AGGCAGCTCAATGTCGGCAATGGTGCGCGCTAAAGTGTCCGTTAATAACAGAAAAGCGGCGCCGAGAAGCAAAGATGTCGGAAGCAACAGGATAAAATTGGCGCCCACCAATAAACGGGCAATATGCGGCACCAATAAGCCGACCCAACCGATAATGCCTGTAATAGACACCGCACTTGCCGTGCAAAGGGTGGTAAAAATAATCAAAATGTAGCGGGTCATTTTTATCGGTACGCCAAGGCTGCACGCTTCTTCTTCCTCTAAAGAAAGCAAATTTAAACGCCAACGAAGTAAAAATAGCGGCGCCATACCGAGCAATAAAATCGGCGCCAGTTGCAACACATCTTGCGGACTAATGGCGGTTAAGCTTCCTAG‑TAG‑CCAAAAAGT‑AATGGAAGGCAGTTGGGTAAAAGGATCGGCGAGAATTTTCAACAACGAAATCCCCGCGCCAAGCAACGAACCGATGGC‑AATTCCCGATAATACGAGAACGAGAAT > 1/1487660‑1488151 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |