| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,435,913 | A→C | K173T (AAA→ACA) | unknown → | Limit dextrin alpha‑1,6‑maltotetraose‑hydrolase (EC 3.2.1.196) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,435,913 | 0 | A | C | 100.0% | 217.0 / NA | 72 | K173T (AAA→ACA) | unknown | Limit dextrin alpha‑1,6‑maltotetraose‑hydrolase (EC 3.2.1.196) |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (34/38); total (34/38) | |||||||||||
AATTGATGCTGGACCCTTATGCCAAGGCCGTGGTGGGCAAACCGGATTTAAGCTCGCCTGAAACGCAAGCGTGGTTTTTGTTGAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGAAAATACGCGGCACCTATGCCGGTTTGGCATATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTCGCAAGCCAATATGGCGAACCCGTTAAATGAATTTAAACACATGGTGAAAGCCTT > 1/1435667‑1436159 | aaTTGATGCTGGACCCTTATGCCAAGGCCGTGGTGGGCAAACCGGATTTAAGCTCGCCTGAAACGCAAGCGTGGTTTTTGTTGAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATa > 1:571584/1‑251 (MQ=255) aTTGATGCTGGACCCTTATGCCAAGGCCGTGGTGGGCAAACCGGATTTAAGCTCGCCTGAAACGCAAGCGTGGTTTTTGTTGAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATAc < 1:189214/251‑1 (MQ=255) aTTGATGCTGGACCCTTATGCCAAGGCCGTGGTGGGCAAACCGGATTTAAGCTCGCCTGAAACGCAAGCGTGGTTTTTGTTGAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATAc < 1:46183/251‑1 (MQ=255) cccTTATGCCAAGGCCGTGGTGGGCAAACCGGATTTAAGCTCGCCTGAAACGCAAGCGTGGTTTTTGTTGAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGTGACAATACGCGGCACCTATg > 1:378653/1‑251 (MQ=255) cccTTATGCCAAGGCCGTGGTGGGCAAACCGGATTTAAGCTCGCCTGAAACGCAAGCGTGGTTTTTGTTGAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATg > 1:92192/1‑251 (MQ=255) cccTTATGCCAAGGCCGTGGTGGGCAAACCGGATTTAAGCTCGCCTGAAACGCAAGCGTGGTTTTTGTTGAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATg > 1:127447/1‑251 (MQ=255) cTTATGCCAAGGCCGTGGTGGGCAAACCGGATTTAAGCTCGCCTGAAACGCAAGCGTGGTTTTTGTTGAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGc > 1:635584/1‑250 (MQ=255) tGCCAAGGCCGTGGTGGGCAAACCGGATTTAAGCTCGCCTGAAACGCAAGCGTGGTTTTTGTTGAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGtt > 1:163696/1‑251 (MQ=255) tGCCAAGGCCGTGGTGGGCAAACCGGATTTAAGCTCGCCTGAAACGCAAGCGTGGTTTTTGTTGAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGtt > 1:419054/1‑251 (MQ=255) gtggtgGGCAAACCGGATTTAAGCTCGCCTGAAACGCAAGCGTGGTTTTTGTTGAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCgg < 1:254464/239‑1 (MQ=255) ggATTTAAGCTCGCCTGAAACGCAAGCGTGGTTTTTGTTGAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGtt > 1:804287/1‑227 (MQ=255) gATTTAAGCTCGCCTGAAACGCAAGCGTGGTTTTTGTTGAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTa > 1:86442/1‑251 (MQ=255) cGTGGTTTTTGTTGAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACgg < 1:126057/249‑1 (MQ=255) cGTGGTTTTTGTTGAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACgg < 1:233564/249‑1 (MQ=255) tgttgAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAgttg < 1:374927/251‑1 (MQ=255) tgttgAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTAAGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAgttg < 1:874705/251‑1 (MQ=255) tgttgAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTAAGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAgtcg < 1:874720/251‑3 (MQ=255) gttgAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCAc > 1:358223/1‑180 (MQ=255) ggATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACgg < 1:849708/224‑1 (MQ=255) gATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTAcg < 1:417741/250‑1 (MQ=255) cGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGtt < 1:137656/170‑1 (MQ=255) gCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGaa > 1:234996/1‑251 (MQ=255) cGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTacaac < 1:837183/249‑1 (MQ=255) gtggtggtTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGt > 1:686449/1‑172 (MQ=255) tggtggtTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAaga < 1:454066/251‑1 (MQ=255) ggtggtTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAagag > 1:343947/1‑251 (MQ=255) gtggtTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTGTTTGAAAAAGTTAGGta > 1:433810/1‑187 (MQ=255) gtggtTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAgg > 1:665090/1‑251 (MQ=255) ggtTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACgg > 1:439605/1‑191 (MQ=255) gATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAaga > 1:387920/1‑243 (MQ=255) tCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGCGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTATTGCCCGTAAATTACGCGGTAAGCGAACCGCAc < 1:429824/229‑1 (MQ=255) cATTTGACTGGCAGAGTGACAGAGCGCCTAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTGCCAGTTACAAGACGCGGCACCTATGCCGGTTTGGCTCATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAAc < 1:639795/178‑1 (MQ=255) tttGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTg < 1:62922/251‑1 (MQ=255) gACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATAcgcg > 1:213711/1‑112 (MQ=255) gACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGta < 1:803112/169‑1 (MQ=255) gagTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACg < 1:533143/136‑1 (MQ=255) gTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATcc < 1:700959/230‑1 (MQ=255) aaaGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGc < 1:695836/251‑1 (MQ=255) cGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGttt < 1:225144/251‑1 (MQ=255) gAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAgttg > 1:144837/1‑163 (MQ=255) tACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCg < 1:838266/251‑1 (MQ=255) gCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAaga < 1:553856/202‑1 (MQ=255) cccTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAAc < 1:107984/184‑1 (MQ=255) aaaCCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAAc < 1:338830/243‑1 (MQ=255) ccATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAAcc < 1:21709/216‑1 (MQ=255) ttGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCgg < 1:492874/79‑1 (MQ=255) ttGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAgttg < 1:538750/140‑1 (MQ=255) ttGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTg < 1:386267/202‑1 (MQ=255) ttGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAAcc < 1:485535/213‑1 (MQ=255) gtgtATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGtat > 1:207110/1‑122 (MQ=255) gtgtATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAagag > 1:573919/1‑184 (MQ=255) gtgtATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTcaca > 1:698944/1‑248 (MQ=255) gtgtATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTcaca > 1:46391/1‑248 (MQ=255) gtgtATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTcaca > 1:702251/1‑248 (MQ=255) agttgagtGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACACCAAAGAGGGTTATCCAATTATTgg > 1:426297/1‑194 (MQ=255) gttgagtGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGt < 1:669129/179‑1 (MQ=255) gttgagtGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTCACAAGCCAata > 1:774650/1‑251 (MQ=255) ttgagtGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTCACAAGCCAatat < 1:715199/251‑1 (MQ=255) ttgagtGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTCACAAGCCAatat < 1:37852/251‑1 (MQ=255) agtGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTCACAAGCCAATATgg < 1:683639/250‑1 (MQ=255) gtgtGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTCACAAGCCAATATGGCg > 1:518179/1‑251 (MQ=255) gtgAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATcc < 1:811567/177‑1 (MQ=255) aGGTTTTACCAAATTACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAatat > 1:598414/1‑223 (MQ=255) ttACAAACGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTCACAAGCCAATATGGCGAACCCGTTAAATGAATTTaa > 1:223951/1‑251 (MQ=255) aaaCGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTCACAAGCCAATATGGCGAACCCGTTAAATGAATTTAAacac < 1:893922/251‑1 (MQ=255) cGGAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCaa > 1:154364/1‑154 (MQ=255) gAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTCACAAGCCAATATGGCGAACCCGTTAAATGAATTTAAac > 1:893675/1‑244 (MQ=255) gAATTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTCACAAGCCAATATGGCGAACCCGTTAAATGAATTTAAACACATGGt > 1:736312/1‑251 (MQ=255) aTTACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTCACAAGCCAATATGGCGAACCCGTTAAATGAATTTAAACACATGGTg < 1:49402/250‑1 (MQ=255) ttACCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTCACAAGCCAATATGGCGAACCCGTTAAATGAATTTAAACACATGGTGaa < 1:872496/251‑1 (MQ=255) aCCAGAGACAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTCACAAGCCAATATGGCGAACCCGTTAAATGAATTTAAACAAATGGTGAAAg > 1:548844/1‑251 (MQ=255) gagaCAATACGCGGCACCTATGCCGGTTTGGCACATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTCACAAGCCAATATGGCGAACCCGTTAAATGAATTTAAACACATGGTGAAAGCCtt > 1:901130/1‑251 (MQ=255) | AATTGATGCTGGACCCTTATGCCAAGGCCGTGGTGGGCAAACCGGATTTAAGCTCGCCTGAAACGCAAGCGTGGTTTTTGTTGAGCGACGAGCGGGATAACGCCCGCTATGCACCGAAAGCGGTGGTGGTTGATCGTGCATTTGACTGGCAGAGTGACAAAGCGCCGAATACGCCCTGGACCGAAACCATTGTGTATGAGTTGAGTGTGAAAGGTTTTACCAAATTACAAACGGAATTACCAGAGAAAATACGCGGCACCTATGCCGGTTTGGCATATGCGCAAACGATTGCGTATTTGAAAAAGTTAGGTATAACGGCAGTCGAGTTGTTGCCCGTAAATTACGCGGTAAGCGAACCGCACTTACAACAAAGAGGGTTATCCAATTATTGGGGTTACAACCCGTTAGCCATGTTTGCCGTGGAACCGAAATATTGCTCGCAAGCCAATATGGCGAACCCGTTAAATGAATTTAAACACATGGTGAAAGCCTT > 1/1435667‑1436159 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |