Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,296,270	C→T	G62R (GGA→AGA)	unknown ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,296,270	0	C	T	100.0%	150.7 / NA	52	G62R (GGA→AGA)	unknown	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (24/28);  total (24/28)

GGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGACCGGACTCATAATAACCAAGTAAATCATGACATTTGAACGTTTTTAATTTTTTAAGCAAAAAAGCTTTGTTTCCGCCTTCGAGCACAAAAGCTTCGCCTCCCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTGAGTTTCGCCCACTAACACCAGTTTACACTTATCCCCCGATTGCGTCATATGAATTGCAAACTATCGCTTGGGCGTGCTTCGCATTCCGACGCAACAACAACCTGCT  >  1/1296038‑1296511                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                  ggCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAAt                                                                                                                                                                                                                                  >  1:765734/1‑250 (MQ=255)     tAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAAc                                                                                                                                                                                                                             <  1:604737/251‑1 (MQ=255)      aGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACg                                                                                                                                                                                                                            >  1:853795/1‑251 (MQ=255)               aCGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCt                                                                                                                                                                                                                   <  1:153904/251‑1 (MQ=255)                      ggCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTg                                                                                                                                                                                                            >  1:104007/1‑251 (MQ=255)                                  ggCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCgaga                                                                                                                                                                                                 >  1:473612/1‑250 (MQ=255)                                        ggTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAacac                                                                                                                                                                                           <  1:23451/250‑1 (MQ=255)                                            ctcGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGAt                                                                                                                                                                                      <  1:862477/251‑1 (MQ=255)                                            ctcGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGAt                                                                                                                                                                                      <  1:813220/251‑1 (MQ=255)                                                  acaTGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTcc                                                                                                                                                                                <  1:617054/251‑1 (MQ=255)                                                       ccGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTc                                                                                                                                                                           <  1:68208/251‑1 (MQ=255)                                                               gTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATc                                                                                                                                                                                                                                 <  1:31273/189‑1 (MQ=255)                                                               gTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCt                                                                                                                                                                                                              <  1:373634/208‑1 (MQ=255)                                                                   aaaTCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCaa                                                                                                                                                               <  1:49810/251‑1 (MQ=255)                                                                       ctctACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAAc                                                                                                                                                                                                                             >  1:232723/1‑185 (MQ=255)                                                                       ctctACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTc                                                                                                                                                                           <  1:372580/235‑1 (MQ=255)                                                                         ctACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGc                                                                                                                                                                 >  1:634013/1‑243 (MQ=255)                                                                                  ccGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTg                                                                                                                                                                                                            >  1:565227/1‑191 (MQ=255)                                                                                                 ttATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGaca                                                                                                                                                                                               >  1:679958/1‑189 (MQ=255)                                                                                                 ttATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGaa                                                                                                                                  >  1:656074/1‑250 (MQ=255)                                                                                                 ttATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGaa                                                                                                                                  >  1:45851/1‑250 (MQ=255)                                                                                                      aTCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAg                                                                                                                                    <  1:65448/243‑1 (MQ=255)                                                                                                      aTCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAAt                                                                                                                            >  1:832235/1‑251 (MQ=255)                                                                                                            tgctgcGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGAt                                                                                                                      <  1:350230/251‑1 (MQ=255)                                                                                                                    cAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCgg                                                                                                              <  1:702551/251‑1 (MQ=255)                                                                                                                      aTCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTg                                                                                                            <  1:772387/251‑1 (MQ=255)                                                                                                                       tctcTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTcc                                                                                                                                                                                <  1:23072/182‑1 (MQ=255)                                                                                                                        ctctAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTc                                                                                                                                                                           >  1:663032/1‑186 (MQ=255)                                                                                                                        ctctAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTGAg                                                                                                          >  1:152494/1‑251 (MQ=255)                                                                                                                        ctctAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTGAg                                                                                                          >  1:265119/1‑251 (MQ=255)                                                                                                                               tctggttcGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTGAGTTTCg                                                                                                     <  1:116601/242‑1 (MQ=255)                                                                                                                                  ggttcGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAacac                                                                                                                                                                                           <  1:33126/156‑1 (MQ=255)                                                                                                                                        gACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAgg                                                                                                                                                                                   >  1:448139/1‑162 (MQ=255)                                                                                                                                          cTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTGAGTTTCGCCCACTAACAcc                                                                                         <  1:755870/250‑1 (MQ=255)                                                                                                                                            cATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGc                                                                                                                                                                 >  1:837863/1‑176 (MQ=255)                                                                                                                                            cATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTGAGTTTCGCCCACTAACACCAg                                                                                       >  1:788769/1‑250 (MQ=255)                                                                                                                                                  aaCCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTGAGTTTCGCCCACTAACACCAGTTTacac                                                                                <  1:535062/251‑1 (MQ=255)                                                                                                                                                  aaCCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTGAGTTTCGCCCACTAACACCAGTTTacac                                                                                <  1:822461/251‑1 (MQ=255)                                                                                                                                                  aaCCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTGAGTTTCGCCCACTAACACCAGTTTacac                                                                                <  1:488132/251‑1 (MQ=255)                                                                                                                                                           aaTCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTGAGTTTCGCCCACTAACACCAGTTTACACTTATcccc                                                                        >  1:484687/1‑250 (MQ=255)                                                                                                                                                           aaTCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTGAGTTTCGCCCACTAACACCAGTTTACACTTATcccc                                                                        >  1:417761/1‑250 (MQ=255)                                                                                                                                                            aTCATGACATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTGAGTTTCGCCCACTAACACCAGTTTACACTTATCCCCCg                                                                      >  1:350783/1‑251 (MQ=255)                                                                                                                                                                   cATTTAAACGTTTTTAATTTTTTAAGCAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGa                                                                                                                                                            <  1:513087/158‑1 (MQ=255)                                                                                                                                                                                             cAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGc                                                                                                                                                                 <  1:363/127‑1 (MQ=255)                                                                                                                                                                                             cAAATAAGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGAc                                                                                                                                                           >  1:678024/1‑133 (MQ=255)                                                                                                                                                                                               aataaGCTTTGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAAt                                                                                                                                                       <  1:34289/132‑1 (MQ=255)                                                                                                                                                                                                        tGTTTCCGCCTTCCAGTACAAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTGAGTTTCGCCCACTAACACCAGTTTACACTTATCCCCCGATTGCGTCATAccgtaattgccatttaaaaacgcgtgtttttct                          <  1:138690‑M1/251‑34 (MQ=255)                                                                                                                                                                                                                  ttccagtacaaaagcttCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTGAGTTTCGCCCACTAACACCAGTTTACACTTATCCCCCGATTGCGTCATAccgtaattgccatttaaaaacgcgtgtttttcttgttcattca                >  1:401627‑M1/8‑208 (MQ=255)                                                                                                                                                                                                                  ttccagtacaaaagcttCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTGAGTTTCGCCCACTAACACCAGTTTACACTTATCCCCCGATTGCGTCATAccgtaattgccatttaaaaacgcgtgtttttcttgttcattca                >  1:83093‑M1/8‑208 (MQ=255)                                                                                                                                                                                                                  ttccagtacaAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGc                                                                                                                                                                 >  1:432798/8‑106 (MQ=255)                                                                                                                                                                                                                       gtacaAAAGCTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGAt                                                                                                                                                                                      <  1:603161/78‑1 (MQ=255)                                                                                                                                                                                                                                cTTCGCCTCTCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTGAGTTTCGCCCACTAACACCAGTTTACACTTATCCCCCGATTGCGTCATAccgtaattgccatttaaaaacgcgtgtttttcttgttcattcaacattttattttcc  <  1:155340‑M1/251‑58 (MQ=255)                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                  GGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGACCGGACTCATAATAACCAAGTAAATCATGACATTTGAACGTTTTTAATTTTTTAAGCAAAAAAGCTTTGTTTCCGCCTTCGAGCACAAAAGCTTCGCCTCCCAGCGCCCGATCTAAATCAAACGGTTCGGGCTTGTCTTGCCAAAGCGAGACAACACATGATAGGTCCTGGTCAGTCCACTGCAACGACCAATCGTCACCTCTGGTGATAAGAACCAAATACGGATTATCTCGGTGAGTTTCGCCCACTAACACCAGTTTACACTTATCCCCCGATTGCGTCATATGAATTGCAAACTATCGCTTGGGCGTGCTTCGCATTCCGACGCAACAACAACCTGCT  >  1/1296038‑1296511

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑