Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,295,987 C→T G156D (GGT→GAT)  unknown ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,295,9870CT100.0% 116.9 / NA 40G156D (GGT→GAT) unknownhypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (18/22);  total (18/22)

GTTAAGTGGATAGATAAAAGAACATAACCAAGATATAAAATATTTTAACATTTGAATTTCTCCTGTTTTGATAAAAATAAAAAACCGCACTTTCGCGGTCTGTTGTTACTCTTGATACCGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGATAATGCTCTTTGGCTCTTACGCTTTTTACGAGCAGCTTTTGGTTTAGACCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGACCGGACTCATAATAACCAAGTAAATCATGACATTTGAACGTTTTTAATTTTTTAAGCAAAA  >  1/1295740‑1296230
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                   
gTTAAGTGGATAGATAAAAGAACATAACCAAGATATAAAATATTTTAACATCTGAATTTCTCCTGTTTTGATAAAAATAAAAAACCGCACTTTCGCGGTCTGTTGTTACTCTTGATACCGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAgatccg                                                                                                                                                                                                                                                  >  1:267404/1‑251 (MQ=255)
                    aaCATAACCAAGATATAAAATATTTTAACATCTGAATTTCTCCTGTTTTGATAAAAATAAAAAACCGCACTTTCGCGGTCTGTTGTTACTCTTGATACCGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAatat                                                                                                                                                                                                                              <  1:243246/251‑1 (MQ=255)
                    aaCATAACCAAGATATAAAATATTTTAACATCTGAATTTCTCCTGTTTTGATAAAAATAAAAAACCGCACTTTCGCGGTCTGTTGTTACTCTTGATACCGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAata                                                                                                                                                                                                                               <  1:635794/250‑1 (MQ=255)
                    aaCATAACCAAGATATAAAATATTTTAACATCTGAATTTCTCCTGTTTTGATAAAAATAAAAAACCGCACTTTCGCGGTCTGTTGTTACTCTTGATACCGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAata                                                                                                                                                                                                                               <  1:28989/250‑1 (MQ=255)
                           ccAAGATATAAAATATTTTAACATCTGAATTTCTCCTGTTTTGATAAAAATAAAAAACCGCACTTTCGCGGTCTGTTGTTACTCTTGATACCGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCAc                                                                                                                                                                                                                       <  1:488604/251‑1 (MQ=255)
                                 tataAAATATTTTAACATCTGAATTTCTCCTGTTTTGATAAAAATAAAAAACCGCACTTTCGCGGTCTGTTGTTACTCTTGATACCGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTAc                                                                                                                                                                                                                                    <  1:385155/232‑1 (MQ=255)
                                     aaaTATTTTAACATCTGAATTTCTCCTGTTTTGATAAAAATAAAAAACCGCACTTTCGCGGTCTGTTGTTACTCTTGATACCGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTAt                                                                                                                                                                                                             <  1:755179/251‑1 (MQ=255)
                                                        tttCTCCTGTTTTGATAAAAATAAAAAACCGCACTTTCGCGGTCTGTTGTTACTCTTGATACCGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGc                                                                                                                                                                                          <  1:46432/251‑1 (MQ=255)
                                                           ctcCTGTTTTGATAAAAATAAAAAACCGCACTTTCGCGGTCTGTTGTTACTCTTGATACCGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAAt                                                                                                                                                                                       >  1:379309/1‑251 (MQ=255)
                                                                gTTTTGATAAAAATAAAAAACCGCACTTTCGCGGTCTGTTGTTACTCTTGATACCGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAatat                                                                                                                                                                                                                              >  1:862557/1‑207 (MQ=255)
                                                                  tttGATAAAAATAAAAAACCGCACTTTCGCGGTCTGTTGTTACTCTTGATACCGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTTGTAGATTGGCTTAGGCAATTCACGTa                                                                                                                                                                                <  1:627747/251‑1 (MQ=255)
                                                                                       cACTTTCGCGGTCTGTTGTTACTCTTGATACCGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTgg                                                                                                                                                           >  1:556550/1‑251 (MQ=255)
                                                                                         cTTTCGCGGTCTGTTGTTACTCTTGATACCGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGt                                                                                                                                                         >  1:10239/1‑251 (MQ=255)
                                                                                                      ttgttACTCTTGATACCGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGc                                                                                                                                            <  1:726078/251‑1 (MQ=255)
                                                                                                                tGATACCGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGc                                                                                                                                                                                          <  1:826788/195‑1 (MQ=255)
                                                                                                                      cGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAAtc                                                                                                                            <  1:808075/251‑1 (MQ=255)
                                                                                                                       gTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAAt                                                                                                                             >  1:81688/1‑249 (MQ=255)
                                                                                                                               gTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAAtc                                                                                                                            <  1:407956/242‑1 (MQ=255)
                                                                                                                                    cATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCAc                                                                                                                                                                                                                       >  1:157972/1‑146 (MQ=255)
                                                                                                                                      tctcAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGc                                                                                                                                                                                          <  1:109294/173‑1 (MQ=255)
                                                                                                                                                   gATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTtat                                                                                               >  1:14641/1‑251 (MQ=255)
                                                                                                                                                            gtcTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCAtg                                                                                      >  1:131122/1‑251 (MQ=255)
                                                                                                                                                              cTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAatat                                                                                                                                                                                                                              <  1:671907/113‑1 (MQ=255)
                                                                                                                                                                      ttGTAATATCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAAt                                                                            >  1:865293/1‑251 (MQ=255)
                                                                                                                                                                            tatCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTaa                                                                      >  1:538723/1‑251 (MQ=255)
                                                                                                                                                                             atCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCAc                                                                                                                                                                                                                       >  1:212009/1‑105 (MQ=255)
                                                                                                                                                                             atCTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTACCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAg                                                                     <  1:522719/251‑1 (MQ=255)
                                                                                                                                                                               cTGCCATGCTCTAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGc                                                                                                                                                               <  1:286575/159‑1 (MQ=255)
                                                                                                                                                                                       ctctAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCg                                                                                                               <  1:264940/199‑1 (MQ=255)
                                                                                                                                                                                       ctctAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTc                                                                   >  1:551755/1‑243 (MQ=255)
                                                                                                                                                                                       ctctAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTggttcgg                                                           >  1:665011/1‑246 (MQ=255)
                                                                                                                                                                                       ctctAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTggttcgg                                                           >  1:324814/1‑246 (MQ=255)
                                                                                                                                                                                       ctctAGTGCCGAGTGGTAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTggttc                                                             <  1:126818/249‑4 (MQ=255)
                                                                                                                                                                                                    tggtAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAAcc                                              <  1:745079/248‑1 (MQ=255)
                                                                                                                                                                                                      gtAATGCTCTTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACAATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTa                                                                                                                                                                                >  1:284855/2‑119 (MQ=255)
                                                                                                                                                                                                            ctctTTGGCTCTTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAAt                                      >  1:107940/1‑251 (MQ=255)
                                                                                                                                                                                                                      ctTACGCTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAAtc                                                                                                                            <  1:350986/155‑1 (MQ=255)
                                                                                                                                                                                                                            cTTTTTACCAGCAGCTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGt                      <  1:237657/251‑1 (MQ=255)
                                                                                                                                                                                                                              tgggaatcgcagcTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACg                       <  1:843394/240‑1 (MQ=255)
                                                                                                                                                                                                                                 taccagcagcTTCTGGCTTAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTa                 >  1:386965/5‑251 (MQ=255)
                                                                                                                                                                                                                                                gcttAGATCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGTTCGGACTCATAATAACCAAGTAAATCATGACATTTAAACGTTTTTAATTTTTTAAGCaaat  >  1:214340/3‑250 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                   
GTTAAGTGGATAGATAAAAGAACATAACCAAGATATAAAATATTTTAACATTTGAATTTCTCCTGTTTTGATAAAAATAAAAAACCGCACTTTCGCGGTCTGTTGTTACTCTTGATACCGTTTACCAGTTAACATCTCAATAACTTGGATTACGTCGTCTTTTGATTTGTAATATCTGCCATGCTCTAGTGCCGAGTGATAATGCTCTTTGGCTCTTACGCTTTTTACGAGCAGCTTTTGGTTTAGACCCGACCCCAAATAGTACAAATATTCTGCACCATCCGGTATCTCGTAGATTGGCTTAGGCAATTCACGTAAAGGCGCCTTAATTGGCTTGGGTTCTCGCCACATGCCGACAATGTCTAAATCTCTACGACTACCGTCAAAATTACCTTTATAATCCCATGCTGCGGCAATCTCTAAGTCTGGACCGGACTCATAATAACCAAGTAAATCATGACATTTGAACGTTTTTAATTTTTTAAGCAAAA  >  1/1295740‑1296230

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑