| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,126,361 | G→C | V44L (GTG→CTG) | unknown → | ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) / ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,126,361 | 0 | G | C | 100.0% | 180.1 / NA | 62 | V44L (GTG→CTG) | unknown | ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) / ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron) |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (28/34); total (28/34) | |||||||||||
AGCGAAGAAGGCAAACGCTTGATTAATAAATGGTTGGCGGAAATTAAATTGGCGAAATAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGGTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGCTACGCCGTTATTTTTCTGACATTGGCGCTAGGCGCCATTTTGGTGGATGCCTTGGCACGCCTGCGATTTATGCAGGTC > 1/1126121‑1126606 | aGCGAAGAAGGCAAACGCTTGATTAATAAATGGTTGGCGGAAATTAAATTGGCGAAATAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGt > 1:424236/1‑251 (MQ=255) cGAAGAAGGCAAACGCTTGATTAATAAATGGTTGGCGGAAATTAAATTGGCGAAATAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGtt < 1:823184/250‑1 (MQ=255) cGAAGAAGGCAAACGCTTGATTAATAAATGGTTGGCGGAAATTAAATTGGCGAAATAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTc < 1:809392/251‑1 (MQ=255) gaagaaGGCAAACGCTTGATTAATAAATGGTTGGCGGAAATTAAATTGGCGAAATAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCa > 1:867835/1‑251 (MQ=255) gaagaaGGCAAACGCTTGATTAATAAATGGTTGGCGGAAATTAAATTGGCGAAATAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCa > 1:228646/1‑251 (MQ=255) aagGCAAACGCTTGATTAATAAATGGTTGGCGGAAATTAAATTGGCGAAATAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCg < 1:342253/251‑1 (MQ=255) cTTGATTAATAAATGGTTGGCGGAAATTAAATTGGCGAAATAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAgc < 1:344926/250‑1 (MQ=255) aTTAATAAATGGTTGGCGGAAATTAAATTGGCGAAATAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAgctgg > 1:870538/1‑249 (MQ=255) aaaTGGTTGGCGGAAATTAAATTGGCGAAATAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGtt < 1:104048/251‑1 (MQ=255) aaattaaattGGCGAAATAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTg < 1:740054/251‑1 (MQ=255) ttGGCGAAATAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTccc < 1:312196/251‑1 (MQ=255) gCGAAATAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCttt > 1:246953/1‑251 (MQ=255) gAAATAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCGGCGAATATTTCGCGGCGctgggctggg > 1:425570/1‑197 (MQ=255) gAAATAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCtttt > 1:673783/1‑250 (MQ=255) aaaTAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTtttc < 1:170845/250‑1 (MQ=255) tAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTg > 1:291432/1‑234 (MQ=255) gCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTcc > 1:133280/1‑250 (MQ=255) gggAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCtt > 1:607008/1‑250 (MQ=255) aaTAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTtttc > 1:106021/1‑231 (MQ=255) aaTAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCggg < 1:778242/251‑1 (MQ=255) aaTAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCggg < 1:88593/251‑1 (MQ=255) aaTAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCCTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCggg < 1:431538/251‑1 (MQ=255) tAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGtt > 1:360544/1‑203 (MQ=255) cACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAAt < 1:657599/251‑1 (MQ=255) cACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAAt < 1:22163/251‑1 (MQ=255) gCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGtt > 1:530798/1‑158 (MQ=255) gATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTg < 1:805062/192‑1 (MQ=255) aTTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTtttcttt > 1:288978/1‑207 (MQ=255) aTTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGc < 1:729602/250‑1 (MQ=255) ttttCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAAt > 1:650860/1‑234 (MQ=255) ttCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGtt > 1:837962/1‑251 (MQ=255) cTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGttt > 1:468816/1‑250 (MQ=255) aTCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCAc < 1:297479/251‑1 (MQ=255) cAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTc < 1:93636/251‑1 (MQ=255) aTGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTgcggcg > 1:662775/1‑174 (MQ=255) aaaaaaaCAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAgctg < 1:311116/153‑1 (MQ=255) aaaaaaCAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATCACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCtt < 1:427681/251‑1 (MQ=255) aTTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGt < 1:587446/251‑1 (MQ=255) tCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTccc < 1:877228/168‑1 (MQ=255) tCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGc < 1:829861/219‑1 (MQ=255) cACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGc > 1:59152/1‑106 (MQ=255) ccTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGc < 1:632326/208‑1 (MQ=255) ccTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTccgc > 1:231116/1‑241 (MQ=255) ggATTTTGCTTGCATTTACGGCATTTGCGCTATTGTCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCgg > 1:794196/1‑166 (MQ=255) gATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCcgtt > 1:347131/1‑251 (MQ=255) gcATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTgg > 1:28484/1‑251 (MQ=255) cATTTGCGGCGTTTGCGCTATTGCCTGTGCGAGCTTTGGATTTCGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGc < 1:783007/251‑1 (MQ=255) cATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTAttt > 1:754170/1‑188 (MQ=255) cATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTgg > 1:381615/1‑250 (MQ=255) aTTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTtttc < 1:195608/146‑1 (MQ=255) tGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGCTACGCCGTTAttt < 1:846833/251‑1 (MQ=255) gcgcTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGc > 1:392503/1‑237 (MQ=255) cTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGCTACGCCGTTAttttt > 1:522888/1‑249 (MQ=255) gCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGCTACGCCGTTATTTTTCTGACAt > 1:637603/1‑251 (MQ=255) ttACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGCTACGCCGTTATTTTTCTGACATTGGCGCTAGGCGCCAttt < 1:568086/251‑1 (MQ=255) cACCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGCTACGCCGTTATTTTTCTGACATTGGCGCTAGGCGCCATTTTGGTGGATGCCTTGGCAc < 1:508302/251‑1 (MQ=255) aCCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGc < 1:894427/192‑1 (MQ=255) aCCCGCAGCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGCTACGCCGTTATTTTTCTGACATTGGCGCTAGGCGCCATTTtggtg < 1:703999/237‑1 (MQ=255) gCGAATATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGCTACGCCGTTATTTTTCTGACATTGgcgc < 1:688298/213‑1 (MQ=255) aaTATTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGCTACGCCGTTATTTTTCTGACATTGGCGCTAGGCGCCATTTTGGTGGATGCCTTGGCACGCCTGCGAtt < 1:93126/250‑1 (MQ=255) atatTTCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGCTACGCCGTTATTTTTCTGACATTGGCGCTAGGCGCCATTTTGGTGGATGCCTTGGCACGCCTGCGATTTa > 1:822294/1‑251 (MQ=255) tttCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGCTACGCCGTTATTTTTCTGACATTGGCGCTAGGCGCCATTTTGGTGGATGCCTTGGCACGCCTGCGATTTATGc < 1:750937/251‑1 (MQ=255) tttCGCGGCGCTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGCTACGCCGTTATTTTTCTGACATTGGCGCTAGGCGCCATTTTGGTGGATGCCTTGGCACGCCTGCGATTTATGc < 1:644899/251‑1 (MQ=255) cggcgcTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGCTACGCCGTTATTTTTCTGACATTGGCGCTAGGCGCCATTTTGGTGGATGCCTTGGCACGCCTGCGATTTATGCAgggc < 1:706147/251‑3 (MQ=255) cggcgcTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGCTACGCCGTTATTTTTCTGACATTGGCGCTAGGCGCCATTTTGGTGGATGCCTTGGCACGCCTGCGATTTATGCAgggc < 1:616367/251‑3 (MQ=255) | AGCGAAGAAGGCAAACGCTTGATTAATAAATGGTTGGCGGAAATTAAATTGGCGAAATAGCCTTATCGTGGGGAATAACTTCTCCACGAAATCAGCTCAGATTTTCTATCAATGCTAAAAAAACAATTTCGTCACAACCTCACCTGGATTTTGCTTGCATTTACGGCATTTGCGCTATTGCCTGTGCGAGCTTTGGATTACGGCATTTTCGGCGCCACCCGCAGCGAATATTTCGCGGCGGTGGGCTGGGTTCAACCGAATATCAGCTGGCTGTGGTTTGCGGCGTTATTGTTTTTCCCTTTTCTTTCCCGCAGTGCCTTCGGGCGACCTAAAATTACTTTATTTTTAGCCGTTTCACTCGGTGTCTTCATTTGGTTTTCCGCCGAATTTTTCCGTTTTCGTTTTGGCTACGCCGTTATTTTTCTGACATTGGCGCTAGGCGCCATTTTGGTGGATGCCTTGGCACGCCTGCGATTTATGCAGGTC > 1/1126121‑1126606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |