| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,084,281 | T→C | N68D (AAT→GAT) | unknown ← | N‑acetylmuramoyl‑L‑alanine amidase (EC 3.5.1.28) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,084,281 | 0 | T | C | 98.5% | 179.1 / NA | 68 | N68D (AAT→GAT) | unknown | N‑acetylmuramoyl‑L‑alanine amidase (EC 3.5.1.28) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (31/36); minor base A (0/1); total (31/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCCCAACAGCTCCGAACGTTTTTCATGATCTTCCAGCCATTGCCCCATTTCGTCATTGGCGCGACGGTTTGACAACACCCATACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATTTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATTGTGGTACATCATCGTTATTTAATTGTTCAATAATCTGT > 1/1084042‑1084521 | gCCCAACAGCTCCGAACGTTTTTCATGATCTTCCAGCCATTGCCCCATTTCGTCATTGGCGCGACGGTTTGACAACACCCATACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCtt > 1:192374/1‑251 (MQ=255) cAACAGCTCCGAACGTTTTTCATGATCTTCCAGCCATTGCCCCATTTCGTCATTGGCGCGACGGTTTGACAACACCCATACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTa < 1:835339/251‑1 (MQ=255) aaCAGCTCCGAACGTTTTTCATGATCTTCCAGCCATTGCCCCATTTCGTCATTGGCGCGACGGTTTGACAACACCCATACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTaa < 1:500321/251‑1 (MQ=255) cATGATCTTCCAGCCATTGCCCCATTTCGTCATTGGCGCGACGGTTTGACAACACCCATACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAgg < 1:245241/251‑1 (MQ=255) tCTTCCAGCCATTGCCCCATTTCGTCATTGGCGCGACGGTTTGACAACACCCATACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTa > 1:679812/1‑250 (MQ=255) cTTCCAGCCATTGCCCCATTTCGTCATTGGCGCGACGGTTTGACAACACCCATACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACa > 1:174828/1‑251 (MQ=255) cTTCCAGCCATTGCCCCATTTCGTCATTGGCGCGACGGTTTGACAACACCCATACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACa > 1:517433/1‑251 (MQ=255) ttCCAGCCATTGCCCCATTTCGTCATTGGCGCGACGGTTTGACAACACCCATACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACAt < 1:178048/251‑1 (MQ=255) ttCCAGCCATTGCCCCATTTCGTCATTGGCGCGACGGTTTGACAACACCCATACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACAt < 1:463528/251‑1 (MQ=255) tCATTGGCGCGACGGTTTGACAACACCCATACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGt < 1:559203/250‑1 (MQ=255) tttGACAACACCCATACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAgcgc < 1:302204/250‑1 (MQ=255) gACAACACCCATACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCggg > 1:231651/1‑251 (MQ=255) cccATACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGtt < 1:550068/200‑1 (MQ=255) cccATACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCttt > 1:607068/1‑250 (MQ=255) aTACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGaaa < 1:73/192‑1 (MQ=255) aTACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGa < 1:82982/190‑1 (MQ=255) aTACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCg > 1:897432/1‑251 (MQ=255) cgTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGAt < 1:160546/250‑1 (MQ=255) cgTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATc < 1:848267/251‑1 (MQ=255) aaaTTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATGGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAAc < 1:515537/251‑1 (MQ=255) ttCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATCCGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCGGGGGTCTTTCCCGCCATGACCGGGATCAACGGc < 1:782953/251‑1 (MQ=255) cGGGTTTTCTGAGAAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTCCGCGCAATTTCGGACCGTTGCGGCACGAAAATAAAGTAATCGCCGTTGCGGGTAAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGTTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCaa < 1:23404/251‑1 (MQ=255) gggTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAggg < 1:847361/171‑1 (MQ=255) gTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGt > 1:632981/1‑251 (MQ=255) tCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTcc > 1:211650/1‑250 (MQ=255) aTCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTAc < 1:147716/251‑1 (MQ=255) aaTGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCgggg > 1:466052/1‑196 (MQ=255) ccAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGTAATAAAGTAATCGCCGTTGCGGGTTAATACAGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCCCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCa > 1:561739/1‑249 (MQ=255) gtgCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAgg > 1:521719/1‑124 (MQ=255) cgcgAAATTTCGGAACGTTGCGGCACGAAAATAAAGTAATCGCCGTTGCGGGTTAATCCGGCATGAAAACGCGGATCCTTATCAAAAAGCGTTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGAc < 1:573731/251‑1 (MQ=255) cggggagatgtgaaaaagagacaggAAAAAAAGTAATCGCCGTGGGGGGTTAATACGGCATGAAACCGCGGATCTTTATATAAAAGCGTTTTTAATTCCGGGGGGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCGGATGGCGCCGGGGTTTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAg < 1:894159/228‑1 (MQ=255) aTTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGaaa > 1:900472/1‑251 (MQ=255) tttCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAaat > 1:91357/1‑251 (MQ=255) tttCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAACTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAaat > 1:313331/1‑251 (MQ=255) gAACGTTGCGGCACGAAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGTTCCTTATCTAAAAGCGCTTTTAATTCCCGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAAtt < 1:707271/250‑1 (MQ=255) aaagaaaaTAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTGGCGCCCGATGGCGCCGGGGTTTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGc < 1:534376/246‑1 (MQ=255) cGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGa < 1:676312/243‑1 (MQ=255) gAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTc > 1:236998/1‑140 (MQ=255) gAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCa > 1:626060/1‑150 (MQ=255) gAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAg > 1:817228/1‑251 (MQ=255) aaaaGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAGGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCGGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTc < 1:829495/250‑1 (MQ=255) gTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAAttt < 1:162973/228‑1 (MQ=255) gTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATtg > 1:832392/1‑251 (MQ=255) gTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATACGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATtg > 1:441856/1‑251 (MQ=255) tAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGTTTTTAATTCCGGGGCGATAGAAAGGTTTACTTTTTTTTCATAATTTTTTAGGTTGCGCCCGATAGCGCGGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATtg < 1:245403/250‑1 (MQ=255) tAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGTTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCGGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATtg < 1:198748/250‑1 (MQ=255) tAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGTTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCGGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATtg < 1:662164/250‑1 (MQ=255) aTCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCTTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAGGGGTCACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATTGTgg < 1:424880/251‑1 (MQ=255) ccGTTGCGGGTTAATCCGGCATGAAACCGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAAAAAGGTTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATTGTGGTAc < 1:642493/250‑1 (MQ=255) ccGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAg > 1:724244/1‑212 (MQ=255) cGTTGCGGGTTAATACGGCATAAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATTGTGGTAcat < 1:796432/251‑1 (MQ=255) tGCGGTTTAATACGGCATGAAACCGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATTGTGGTAcatcat < 1:743525/251‑1 (MQ=255) gggTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGc > 1:206137/1‑58 (MQ=255) gggTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTAc > 1:401383/1‑162 (MQ=255) ggTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAg < 1:567668/93‑1 (MQ=255) ggTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAgcgc < 1:613256/110‑1 (MQ=255) ggTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCg > 1:362065/1‑157 (MQ=255) ggTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAg > 1:417177/1‑217 (MQ=255) ggTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATTGTGGTACATCATCGtt > 1:369307/1‑251 (MQ=255) ggTTAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATTGTGGTACATCATCGtt > 1:137743/1‑251 (MQ=255) ttAATACGGCATGAAAACGCGGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATTGTGGTACATCATCGTTAt < 1:197249/251‑1 (MQ=255) aCGGCATGAAAACGCGGTTCCTTATCTAAAAGCGTTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAATTTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATTGTGGTACATCATCGTTATTTAAt < 1:727814/251‑1 (MQ=255) gCATGAAAACGCGGATCCTTATCTAAAAGCGTTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCAAAAATTTTTGGGTGGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATtg < 1:374669/226‑1 (MQ=255) cgcgGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATTGTGGTACATCATCGTTATTTAATTGTTCaataat > 1:742953/1‑250 (MQ=255) cgcgGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATTGTGGTACATCATCGTTATTTAATTGTTCaataat > 1:725436/1‑250 (MQ=255) cgcgGATCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATTGTGGTACATCATCGTTATTTAATTGTTCAATAAtc < 1:192068/251‑1 (MQ=255) tCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATTGTGGTACATCATCGTTATTTAATTGTTCAATAAtctgt > 1:250436/1‑248 (MQ=255) tCCTTATCTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATTGTGGTACATCATCGTTATTTAATTGTTCAATAAtctgt > 1:742078/1‑248 (MQ=255) | GCCCAACAGCTCCGAACGTTTTTCATGATCTTCCAGCCATTGCCCCATTTCGTCATTGGCGCGACGGTTTGACAACACCCATACGGAAGCGCCGCGTAAATTCGGGGTTTCTGAGGAATCTGCATGAATGGAAACCAAATAATTGGCTTTGTGCTTACGCGCAATTTCGGAACGTTGCGGCACGGAAATAAAGTAATCGCCGTTGCGGGTTAATACGGCATGAAAACGCGGATCCTTATTTAAAAGCGCTTTTAATTCACGGGCGATAGAAAGGGTTACATTTTTTTCATAAATTTTTAGGTTGCGCCCGATAGCGCCGGGGTCTTTCCCGCCATGACCGGGATCAACGGCAATTGTCCATGCGTTACCGGCGAGAACGGGCATTGCAAAGAAAAAAACGCTGTTGACAAGAAATAATTTAAAGATATTGCCGAGTTTCATTGTGGTACATCATCGTTATTTAATTGTTCAATAATCTGT > 1/1084042‑1084521 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |