| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 5166 | 0 (0.000) | 36 (0.420) | 18/418 | 2.9 | 100% | intergenic (+48/‑225) | unknown/unknown | Superoxide dismutase [Cu‑Zn] precursor (EC 1.15.1.1)/hypothetical protein |
| ? | 1 | 5173 = | NA (NA) | intergenic (+55/‑218) | unknown/unknown | Superoxide dismutase [Cu‑Zn] precursor (EC 1.15.1.1)/hypothetical protein | |||||
GTGATTTACCGGCATTAACCGTATTACACGACGGCACAGCCGCTAACCCGGTTTTAGCCCCACGCATTAAACACTTAGACGACGTGCGCGGTCACTCCCTCATGATCCACGCTGGTGGCGATAACCACTCCGATCACCCGGCCCCACTTGGCGGCGGCGGTCCGCGTATGGCGTGTGGTGTAATTAAATAATCCGCTTTCCGAAACAAAAAAGTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGATTATGTCTTACTCTTATC > 1/4928‑5207 | caacaccatcgtggtcattgagcataatttagacgtgattaaaaccgccgactggattgtagatctcggccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAAtt > 1:747661‑M1/214‑251 (MQ=255) acaccatcgtggtcattgagcataatttagacgtgattaaaaccgccgactggattgtagatctcggccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTaa < 1:840416‑M1/36‑1 (MQ=255) acaccatcgtggtcattgagcataatttagacgtgattaaaaccgccgactggattgtagatctcggccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTg < 1:656721‑M1/40‑1 (MQ=255) atcgtggtcattgagcataatttagacgtgattaaaaccgccgactggattgtagatctcggccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAAtt < 1:735215‑M1/38‑1 (MQ=255) atcgtggtcattgagcataatttagacgtgattaaaaccgccgactggattgtagatctcggccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTg < 1:576972‑M1/45‑1 (MQ=255) gtcattgagcataatttagacgtgattaaaaccgccgactggattgtagatctcggccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGAtt < 1:555999‑M1/51‑1 (MQ=255) tgagcataatttagacgtgattaaaaccgccgactggattgtagatctcggccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGATTATGTc > 1:846066‑M1/196‑251 (MQ=255) gcataatttagacgtgattaaaaccgccgactggattgtagatctcggccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGATTATGTCTTa < 1:294978‑M1/59‑1 (MQ=255) taatttagacgtgattaaaaccgccgactggattgtagatctcggccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGATTATGTCTTActc > 1:876‑M1/190‑251 (MQ=255) taatttagacgtgattaaaaccgccgactggattgtagatctcggccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGATTATGTCTTActc > 1:834850‑M1/190‑251 (MQ=255) taatttagacgtgattaaaaccgccgactggattgtagatctcggccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGATTATGTCTTActc > 1:570445‑M1/190‑251 (MQ=255) atttagacgtgattaaaaccgccgactggattgtagatctcggccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGATTATGTCTTActc < 1:103016‑M1/62‑1 (MQ=255) atttagacgtgattaaaaccgccgactggattgtagatctcggccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGATTATGTCTTACTCtt < 1:93332‑M1/64‑1 (MQ=255) atttagacgtgattaaaaccgccgactggattgtagatctcggccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGATTATGTCTTACTCtt < 1:195506‑M1/64‑1 (MQ=255) tagacgtgattaaaaccgccgactggattgtagatctcggccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGATTATGTCTTACTCttacc > 1:776130‑M1/185‑249 (MQ=255) gattaaaaccgccgactggattgtagatctcggccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAg > 1:559060‑M1/178‑225 (MQ=255) ggattgtagatctcggccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAgg < 1:420304‑M1/43‑1 (MQ=255) gccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGATTATGTc < 1:826896‑M1/56‑1 (MQ=255) gccctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGATTATGTc > 1:133237‑M1/146‑201 (MQ=255) cctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAAtt < 1:524890‑M1/38‑1 (MQ=255) cctgaaggcggcagcggcggcggacaaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGATTAt < 1:711461‑M1/53‑1 (MQ=255) caaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGATTATGTc > 1:198295‑M1/120‑175 (MQ=255) aaattatcgcgaccggcacaccggaacaggttgccaaaatggagggctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGATTATGTCTTActc < 1:764254‑M1/62‑1 (MQ=255) ctcgcacaccgcccgcttcctcaaagagattttggcaaaaggctaaaaacgctgcattttccgaccgcacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAAtt > 1:854073‑M1/73‑110 (MQ=255) cacttTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGATTATGTCTTActc > 1:273890‑M1/6‑67 (MQ=255) | GTGATTTACCGGCATTAACCGTATTACACGACGGCACAGCCGCTAACCCGGTTTTAGCCCCACGCATTAAACACTTAGACGACGTGCGCGGTCACTCCCTCATGATCCACGCTGGTGGCGATAACCACTCCGATCACCCGGCCCCACTTGGCGGCGGCGGTCCGCGTATGGCGTGTGGTGTAATTAAATAATCCGCTTTCCGAAACAAAAAAGTGATCTGCACCCCAAAACCTGGACACGGACACCTAATTTGAGGTGCAGATTATGTCTTACTCTTATC > 1/4928‑5207 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |