New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	1	= 457671	0 (0.000)	41 (0.880) +CCCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCACTTGTTTCAGCCACTTCAATCTGCGTTCTTTTCATTTGGGGTTTCAGAATTTTGGAGGTTTTA	19/228	1.0	79.5%	coding (135/1245 nt)	unknown	Integrase
	?	1	= 524883	40 (0.450)					intergenic (+38/‑73)	unknown/unknown	hypothetical protein/Mobile element protein

AGAAAAAAGTGTTACCGATGTTTTAGCTATACCTGATTTTTTAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTTGGAAAGAAGCGATATGGCACGCATAATCACACCGCTAAACAGCACGAAAATAGATAAAGCTAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAGCCCAATGGGGCTAAGTTATGGCGG‑TTTAACTATTACAAGCCTTTCACGCAACCAAAGAAAAGAGCGTTAATTGGCGTTGGCAAATACCCTGATATTTCCTTACAACAAGCAAGAGCAATTAGAGAGGAATATTTATCTTTACTTGCGCAGAATATCGATCCGGCAATCTATCGCCAACAGCAAGAACAAGAGAAACAAAATGAGCTGAATAATACCTATGAGGCGGTGGCGTGGGCGTGGCTTGAGTATCGCAAAACCAAAAAGAACTTTT  >  1/457434‑457915                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                     agcaaaaggttttactcatgttttagctatacctgATTTTTTAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTACCCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgttttagtt                                                                                                                                                                                                                                          >  1:185195‑M1/18‑239 (MQ=255)  gcaaaaggttttactcatgttttagctatacctGATTTTTTAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAAGGGGGCTAAGTTATGGCGG‑TTTcccgttttagtttt                                                                                                                                                                                                                                        >  1:615660‑M1/17‑237 (MQ=255)          ttttactcatgttttagCTATACCTGATTTTTTAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaagg                                                                                                                                                                                                                                 <  1:41447‑M1/242‑22 (MQ=255)                   tGTTTTAGCTATACCTGATTTTTTAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGTGG‑CTTcccgcttcactttttttttgtcttgcggtgg                                                                                                                                                                                                                       >  1:375974‑M1/1‑220 (MQ=255)                   tGTTTTAGCTATACCTGATTTTTTAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGGTTTTcccgtttagttttttaaa                                                                                                                                                                                                                                    >  1:333238‑M1/1‑221 (MQ=255)                   tGTTTTAGCTATACCTGATTTTTTAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTtccgttttagtttttttaaggcttttggtgg                                                                                                                                                                                                                       >  1:141941‑M1/1‑220 (MQ=255)                   tGTTTTAGCTATACCTGATTTTTTAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTtcccttttagttttttttaggattgtggtgg                                                                                                                                                                                                                       >  1:526938‑M1/1‑220 (MQ=255)                     ttttAGCTATACCTGATTTTTTAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaa                                                                                                                                                                                                                      <  1:843830‑M1/250‑33 (MQ=255)                         aGCTATACCTGATTTTTTAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttccgtttttttaaagcttgtggggtaaagg                                                                                                                                                                                                                  >  1:845278‑M1/1‑214 (MQ=255)                                      tttttAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagcc                                                                                                                                                                                                    <  1:471297‑M1/251‑51 (MQ=255)                                          tAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccactt                                                                                                                                                                                                <  1:344987‑M1/251‑55 (MQ=255)                                           aaaaGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttc                                                                                                                                                                                               <  1:117369‑M1/251‑56 (MQ=255)                                                               gagTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagcc                                                                                                                                                                                                    <  1:462182‑M1/226‑51 (MQ=255)                                                                        aGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccac                                                                                                                                                                                                  <  1:315874‑M1/219‑53 (MQ=255)                                                                         gAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttttgctt                                                                                                                                                                                                                                         >  1:256472‑M1/1‑166 (MQ=255)                                                                                tttCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgttttagttttttaaaggcttgtggtgaaaagtcactttttttagccccttcaatctgcgttctttttatttgggggtttagaattttt                                                                                                                                                          >  1:275843‑M1/1‑159 (MQ=255)                                                                                       tctcagaactaagcgatatggcaCGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagtttttttaagggttgtggggaaaaaacacttgttttagccacttcaatctgcgttctttttattttgggtttcagaatttttggggttt                                                                                                                                                   >  1:285485‑M1/11‑152 (MQ=255)                                                                                            gaactaagcgataTGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggagg                                                                                                                                                      <  1:167973‑M1/238‑97 (MQ=255)                                                                                            gaactaagcgataTGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaagg                                                                                                                                                                                                                                 <  1:260739‑M1/163‑22 (MQ=255)                                                                                            gaactaagcgataTGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcaggttttttaaagcttgtgggggaaaggcacttgttttagccacttcaatctgcgttctttttattttggggtttagaattttggagggttttggg                                                                                                                                              >  1:677091‑M1/6‑147 (MQ=255)                                                                                             aactaagcgatATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttagg                                                                                                                                               <  1:123418‑M1/245‑104 (MQ=255)                                                                                                    cGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCTAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtat                                                                                                                                        <  1:750633‑M1/249‑111 (MQ=255)                                                                                                    cGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtat                                                                                                                                        <  1:364045‑M1/249‑111 (MQ=255)                                                                                                      atatGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTtccgttttagtttttttaaggcttgtggtgaaaaggcacttgttttagccacttcaatctgcgttctttttcttttggggtttagaatttttgggggtttaggttttgataaag                                                                                                                                    >  1:409847‑M1/1‑137 (MQ=255)                                                                                                      atatGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtat                                                                                                                                        <  1:49535‑M1/247‑111 (MQ=255)                                                                                                       tatGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggc                                                                                                                                   <  1:339877‑M1/251‑116 (MQ=255)                                                                                                       tatGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggc                                                                                                                                   <  1:565867‑M1/251‑116 (MQ=255)                                                                                                       tatGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggc                                                                                                                                   <  1:310254‑M1/251‑116 (MQ=255)                                                                                                        atGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcg                                                                                                                                  <  1:833683‑M1/251‑117 (MQ=255)                                                                                                            cACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattt                                                                                                                              <  1:62849‑M1/251‑121 (MQ=255)                                                                                                                  caatCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttgggg                                                                                                                                                                       <  1:895058‑M1/203‑80 (MQ=255)                                                                                                                    aTCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagtttttttaaggcttgtggtggaaagtcacttgtttcagccacttcaatctgcgttctttttattttggggttcagaatttttgaggtttttgg                                                                                                                                               >  1:141888‑M1/1‑123 (MQ=255)                                                                                                                          ccGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagtttttttaaggcttttggggaaaagtcacttgtttcagccccttcaatctgcgttctttttattttgggtttcagaatttttgagggtttttgtttttataaggcgatttttcgccatcaagc                                                                                                                 >  1:240126‑M1/1‑117 (MQ=255)                                                                                                                          ccGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagtttttttaaagcttgtgggggaaaa                                                                                                                                                                                                                   >  1:716238‑M1/1‑117 (MQ=255)                                                                                                                          ccGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggc                                                                                                                                   <  1:36136‑M1/232‑116 (MQ=255)                                                                                                                          ccGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataagg                                                                                                                                    <  1:540832‑M1/231‑115 (MQ=255)                                                                                                                          ccGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcag                                                                                                                                                                 <  1:803993‑M1/202‑86 (MQ=255)                                                                                                                          ccGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatt                                                                                                                                                                            <  1:378310‑M1/191‑75 (MQ=255)                                                                                                                          ccGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatt                                                                                                                                                                            <  1:348598‑M1/191‑75 (MQ=255)                                                                                                                           cGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccc                                                                                                               <  1:687848‑M1/251‑136 (MQ=255)                                                                                                                            gCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattt                                                                                                                              <  1:636200‑M1/235‑121 (MQ=255)                                                                                                                            gCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatc                                                                                                                                                                                           <  1:662489‑M1/174‑60 (MQ=255)                                                                                                                                     cACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacg                                                                                                      <  1:393851‑M1/250‑145 (MQ=255)                                                                                                                                     cACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcac                                                                                                       <  1:882264‑M1/249‑144 (MQ=255)                                                                                                                                     cACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcac                                                                                                       <  1:606530‑M1/249‑144 (MQ=255)                                                                                                                                         aaaaTAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTtccgtttcagtttttttaaggcttgtggggaaaaatcacttgttttagccacctcaatctgcgtttttttcattttggg                                                                                                                                                                       >  1:8083‑M1/1‑102 (MQ=255)                                                                                                                                         aaaaTAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtt                                                                                                                                             <  1:386250‑M1/207‑106 (MQ=255)                                                                                                                                         aaaaTAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTccccgttccgttttttaaaggg                                                                                                                                                                                                                                >  1:818448‑M1/1‑102 (MQ=255)                                                                                                                                            aTAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctcttt                                                                                                          <  1:449009‑M1/239‑141 (MQ=255)                                                                                                                                                acaaagcCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttcc                                                                                          <  1:157348‑M1/249‑157 (MQ=255)                                                                                                                                                     gccaagccGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTccccgttcag                                                                                                                                                                                                                                            >  1:376129‑M1/4‑90 (MQ=255)                                                                                                                                                          gCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttt                                                                                                                                                                                                                                         <  1:10832‑M1/98‑14 (MQ=255)                                                                                                                                                                  aaaaGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaa                                                                         <  1:130436‑M1/250‑174 (MQ=255)                                                                                                                                                                          tttA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatc                                                                <  1:690627‑M1/251‑183 (MQ=255)                                                                                                                                                                                 cTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGTCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggggaaaaatcacttgtttcagccacttcaatctgcgttcttttcatttgggggttcagaattttggagggtttagggttgtataaagcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatga                                                          >  1:282367‑M1/1‑63 (MQ=255)                                                                                                                                                                                   aTCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatc                                                                <  1:544365‑M1/243‑183 (MQ=255)                                                                                                                                                                                   aTCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatc                                                                                                                                                                                           <  1:437347‑M1/120‑60 (MQ=255)                                                                                                                                                                                          ggCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttagg                                                                                                                                               <  1:869470‑M1/157‑104 (MQ=255)                                                                                                                                                                                           gCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaagcttgtggtggaaagtcacttgtttcagccacttcaatctgcgttctttttattttggggtttagaattttggagggttttgggttgtataaagcgattttacgccatcaagccctctttcacgaaaggctttttcaataaatgacttgagaaagagaaaactgatgaaatttagcta                                                >  1:179416‑M1/1‑53 (MQ=255)                                                                                                                                                                                                 ggCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgct                                           <  1:12486‑M1/250‑204 (MQ=255)                                                                                                                                                                                                       aTCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatatac                                    <  1:778861‑M1/251‑211 (MQ=255)                                                                                                                                                                                                       aTCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatatac                                    <  1:865133‑M1/251‑211 (MQ=255)                                                                                                                                                                                                              ggTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacg                                                                       <  1:538363‑M1/209‑176 (MQ=255)                                                                                                                                                                                                              ggTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatc                                                                                                                                                                                           <  1:732923‑M1/93‑60 (MQ=255)                                                                                                                                                                                                                ttAAGCCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatataccgaaatcc                            <  1:110598‑M1/250‑219 (MQ=255)                                                                                                                                                                                                                    acccaATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagtttttttaaggcttgtggggaaaaggcacttgttttagccacttcaatctgcgttcttttcatttgggggttcagaatttttgagggtttagggttttataaggcgattttacgccatcaagccctctttcacgaaaagcttttt                                                                                           >  1:719533‑M1/2‑28 (MQ=255)                                                                                                                                                                                                                                 aaGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataagg                                                                                                                                    <  1:240571‑M1/129‑115 (MQ=255)                                                                                                                                                                                                                                  aGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatat                                      <  1:495177‑M1/222‑209 (MQ=255)                                                                                                                                                                                                                                   gTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatg                                                                                  <  1:875122‑M1/177‑165 (MQ=255)                                                                                                                                                                                                                                    ttATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttt                                                                                                                                                                                 <  1:776495‑M1/81‑70 (MQ=255)                                                                                                                                                                                                                                     tATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatataccgaaatcctgctcggtgaccggcttgataa      <  1:99925‑M1/251‑241 (MQ=255)                                                                                                                                                                                                                                     tATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatataccgaaatcctgctcggtgaccggcttgataa      <  1:836864‑M1/251‑241 (MQ=255)                                                                                                                                                                                                                                     tATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatataccgaaatcctgctcggtgaccggcttgataa      <  1:462969‑M1/251‑241 (MQ=255)                                                                                                                                                                                                                                     tATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatataccgaaatcctgctcggtgaccggcttgataa      <  1:224668‑M1/251‑241 (MQ=255)                                                                                                                                                                                                                                          cGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatataccgaaatcctgctcggtgaccggcttgataatttt  <  1:460453‑M1/250‑245 (MQ=255)                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                     AGAAAAAAGTGTTACCGATGTTTTAGCTATACCTGATTTTTTAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTTGGAAAGAAGCGATATGGCACGCATAATCACACCGCTAAACAGCACGAAAATAGATAAAGCTAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAGCCCAATGGGGCTAAGTTATGGCGG‑TTTAACTATTACAAGCCTTTCACGCAACCAAAGAAAAGAGCGTTAATTGGCGTTGGCAAATACCCTGATATTTCCTTACAACAAGCAAGAGCAATTAGAGAGGAATATTTATCTTTACTTGCGCAGAATATCGATCCGGCAATCTATCGCCAACAGCAAGAACAAGAGAAACAAAATGAGCTGAATAATACCTATGAGGCGGTGGCGTGGGCGTGGCTTGAGTATCGCAAAACCAAAAAGAACTTTT  >  1/457434‑457915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.