Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC	1	1,445,347	+GCCT	coding (248/282 nt)	unknown →	Murein‑DD‑endopeptidase (EC 3.4.99.‑)

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	1	= 1445346	0 (0.000)	69 (0.800) +TGCC	48/420	0.5	100%	coding (247/282 nt)	unknown	Murein‑DD‑endopeptidase (EC 3.4.99.‑)
	?	1	1445347 =	0 (0.000)					coding (248/282 nt)	unknown	Murein‑DD‑endopeptidase (EC 3.4.99.‑)

ATGTTAAAAAATGTTTTTCCTTTGTTGATTCTGTTGCCTGCTGTTGCCATAGCGCAGTCTTATGTGGTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  1/1445100‑1445346 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTAACCATAACGTATCCAGCGTGATGGACTTGGTGAAACTTACCAAATATTCCATGAAAAAAAC  >  1/1445347‑1445595                                                                                                                                                                                                                                                        ||||                                                                                                                                                                                                                                                          ATGTTAAAAAATGTTTTTCCTTTGTTGATTCTGTTGCCTGCTGTTGCCATAGCGCAGTCTTATGTGGTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGC                                                                                                                                                                                                                                                            >  1:674568/1‑250       AAAAATGTTTTTCCTTTGTTGATTCTGTTGCCTGCTGTTGCCATAGCGCAGTCTTATGTGGTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATA                                                                                                                                                                                                                                                     <  1:869805/251‑1                            ATTCTGTTGCCTGCTGTTGCCATAGCGCAGTCTTATGTGGTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGA                                                                                                                                                                                                                                >  1:310003/1‑251                            ATTCTGTTGCCTGCTGTTGCCATAGCGCAGTCTTATGTGGTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCC                                                                                                                                                                                                                                                           <  1:356224/224‑1                                 GTTGCCTGCTGTTGCCATAGCGCAGTCTTATGTGGTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTG                                                                                                                                                                                                                            >  1:766271/1‑250                                                    GCGCAGTCTTATGTGGTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCA                                                                                                                                                                                                        >  1:82575/1‑251                                                         GTCTTATGTGGTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCG                                                                                                                                                                                                   >  1:3030/1‑251                                                         GTCTTATGTGGTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCG                                                                                                                                                                                                   >  1:857049/1‑251                                                         GTCTTATGTGGTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCG                                                                                                                                                                                                   >  1:314913/1‑251                                                         GTCTTATGTGGTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCG                                                                                                                                                                                                   >  1:463199/1‑251                                                         GTCTTATGTGGTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGC                                                                                                                                                                                                         <  1:648760/245‑1                                                         GTCTTATGTGGTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATG                                                                                                                                                                                                                <  1:646641/238‑1                                                           CTTATGTGGTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGAT                                                                                                                                                                                                 >  1:621649/1‑251                                                           CTTATGTGGTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAAT                                                                                                                                                                                                                              >  1:509346/1‑222                                                               TGTGGTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATT                                                                                                                                                                                             <  1:174468/251‑1                                                                   GTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATG                                                                                                                                                                                          >  1:805663/1‑250                                                                          ATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATT                                                                                                                                                                                             >  1:537914/1‑240                                                                                   ATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCC                                                                                                                                                                         <  1:894083/251‑1                                                                                   ATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATA                                                                                                                                                                                                                                                     >  1:221909/1‑175                                                                                    TAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCC                                                                                                                                                                         >  1:782208/1‑250                                                                                           GTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCG                                                                                                                                                                  >  1:294630/1‑250                                                                                              TTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGG                                                                                                                                                              >  1:861525/1‑251                                                                                                      CGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACAC                                                                                                                                                      <  1:231967/251‑1                                                                                                        GTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACG                                                                                                                                                     >  1:264567/1‑250                                                                                                        GTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTGCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCC                                                                                                                                                                        <  1:434111/231‑1                                                                                                          GCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTT                                                                                                                                                  >  1:533284/1‑251                                                                                                          GCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCC                                                                                                                                                                               >  1:763637/1‑222                                                                                                            ACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTA                                                                                                                                                 >  1:305027/1‑250                                                                                                            ACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTA                                                                                                                                                 >  1:775476/1‑250                                                                                                            ACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACA                                                                                                                                                       >  1:537781/1‑244                                                                                                            ACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGG                                                                                                                                                              >  1:57858/1‑237                                                                                                            ACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATAT                                                                                                                                                                                                                                                    <  1:507725/151‑1                                                                                                                    CCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATC                                                                                                                                        <  1:859552/251‑1                                                                                                                    CCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTAT                                                                                                                                         >  1:558441/1‑250                                                                                                                           TCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCC                                                                                                                                                                         <  1:543906/211‑1                                                                                                                             CTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATG                                                                                                                               <  1:607137/251‑1                                                                                                                                         TCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCC                                                                                                                   <  1:887294/251‑1                                                                                                                                         TCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTGTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCC                                                                                                                   <  1:431451/251‑1                                                                                                                                                ACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAAT                                                                                                            >  1:551362/1‑251                                                                                                                                                  TGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACACTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTG                                                                                                          <  1:449815/251‑1                                                                                                                                                        CAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATT                                                                                                                                                                                             <  1:236720/162‑1                                                                                                                                                        CAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGC                                                                                                                                                                                                         <  1:745824/150‑1                                                                                                                                                             AAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATC                                                                                               <  1:717627/251‑1                                                                                                                                                                                ACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGG                                                                                                       <  1:171196/224‑1                                                                                                                                                                                          CCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGT                                                                  >  1:163356/1‑251                                                                                                                                                                                          CCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAAT                                                                                                <  1:59350/221‑1                                                                                                                                                                                            GCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGT                                                                  >  1:547064/1‑249                                                                                                                                                                                             CTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTA                                                               >  1:590420/1‑251                                                                                                                                                                                             CTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAA                                                                                                                       >  1:552881/1‑195                                                                                                                                                                                               ATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGC                                                                                  <  1:639699/230‑1                                                                                                                                                                                                      TTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTAACCATAACG                                                      >  1:729351/1‑251                                                                                                                                                                                                      TTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCAGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACC                                                                                           >  1:440507/1‑214                                                                                                                                                                                                      TTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACA                                                                                                                                                       <  1:156280/154‑1                                                                                                                                                                                                           tcggagtgtgtataagagacagCATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTAACCATAACGTATCC                                                 <  1:532625/229‑1                                                                                                                                                                                                           TTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTAACCATAACGTATCC                                                 <  1:17548/251‑1                                                                                                                                                                                                                       ATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTAACCATAACGTATCCAGCGTGATGGAC                                     <  1:698447/251‑1                                                                                                                                                                                                                       ATTTTGACTACATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTAACCATAACG                                                      >  1:775289/1‑234                                                                                                                                                                                                                                 CATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTAACCATAACGTATCCAGCGTGATGGACTTGGTGAAA                            >  1:94484/1‑250                                                                                                                                                                                                                                 CATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTAACCATAACGTATCCAGCGTGATGGACTTGGTGAAA                            >  1:337888/1‑250                                                                                                                                                                                                                                 CATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTAACCATAACGTATCCAGCGTGATGGACTTGGTGAAA                            >  1:398148/1‑250                                                                                                                                                                                                                                 CATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTAACCATAACGTATCCAGCGTGATGGACTTGGTGAAA                            >  1:724005/1‑250                                                                                                                                                                                                                                 CATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTAACCATAACGTATCCAGCGTGATG                                        <  1:641484/238‑1                                                                                                                                                                                                                                 CATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCG                                                                                 <  1:540815/197‑1                                                                                                                                                                                                                                 CATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTAC                                                                                                                                                <  1:53351/134‑1                                                                                                                                                                                                                                 CATTAAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCC                                                                                                                                                                         >  1:667292/1‑109                                                                                                                                                                                                                                     AAAGGCACGCACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTAACCATAACGTATCCAGCGTGATGGACTTGGTGAAACTTA                        >  1:569085/1‑250                                                                                                                                                                                                                                              CACACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGC                                                                                                                                                                                         <  1:485265/80‑1                                                                                                                                                                                                                                                CACCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTAACCATAACGTATCCAG                                               >  1:233158/1‑216                                                                                                                                                                                                                                                 cCCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTAACCATAACGTATCCAGCGTGATGGACTTGGTGAAACTTACCAAATATTCCAT           <  1:901714/250‑1                                                                                                                                                                                                                                                  CCAAATTGCCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTAACCATAACGTATCC                                                 <  1:667565/212‑1                                                                                                                                                                                                                                                          CCTAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTAACCATAACGTATCCAGCGTGATGGACTTGGTGAAACTTACCAAATATTCCATGAAAAAAAC  <  1:830484/251‑1                                                                                                                                                                                                                                                        ||||                                                                                                                                                                                                                                                          ATGTTAAAAAATGTTTTTCCTTTGTTGATTCTGTTGCCTGCTGTTGCCATAGCGCAGTCTTATGTGGTGTATGATTTTACCCATAATAAAGTATTGGAAAGCGGTGCACCGAATACCGTGCGTCCTATCGCTTCCGTCACCAAACTGATGACAGCAAAAGTATTTCTGGAACACAACAAAAACCCCCGCTATACTGCTTCCATTACTGATGATGATTTTGACTACATTAAAGGCACGCACACCAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  1/1445100‑1445346 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAATATACGCCGATTTCTTGCCGTGAATTGCTGAAAATGATGTTGGTGCATTCCGATAATTATGCCGCTCACGCCTTGTCCCGCTCCGCCGGTATGACACGCTTACAATTTATCGGCAAAATGAATGAAAAAGCCAGACAATTGGGGATGAAATCCACCCGTTTTAGCGACAGTTCGGGTTTGTCTAACCATAACGTATCCAGCGTGATGGACTTGGTGAAACTTACCAAATATTCCATGAAAAAAAC  >  1/1445347‑1445595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.