| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 994,761 | (C)11→9 | intergenic (+224/‑170) | unknown → / → unknown | Magnesium and cobalt efflux protein CorC/Apolipoprotein N‑acyltransferase / Copper homeostasis protein CutE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 994,752 | 0 | C | . | 100.0% | 172.0 / NA | 42 | intergenic (+215/‑180) | unknown/unknown | Magnesium and cobalt efflux protein CorC/Apolipoprotein N‑acyltransferase / Copper homeostasis protein CutE |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (24/18); total (24/18) | |||||||||||
| * | 1 | 994,753 | 0 | C | . | 97.6% | 165.1 / ‑1.7 | 42 | intergenic (+216/‑179) | unknown/unknown | Magnesium and cobalt efflux protein CorC/Apolipoprotein N‑acyltransferase / Copper homeostasis protein CutE |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base . (23/18); total (24/18) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.87e-01 | |||||||||||
GAGGAAGAGGTTGTGGCGTAGTTTCTTCTTTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTCCCCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAATTGCGTGAGAAAACGCGCGCTATCCCGCTTATGAACAAATATTTCACTTATCTTATCGCACTCATTTTCGGCGCTGCCGGCGT > 1/994517‑994984 || gaggaagaggTTGTGGCGTAGTTTCTTCTTTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTccccccccctcaggg > 1:825179/1‑244 (MQ=255) aggaagaggTTGTGGCGTAGTTTCTTCTTTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTccccccccctcagggc < 1:529525/250‑8 (MQ=255) aggaagaggTTGTGGCGTAGTTTCTTCTTTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTccccccccctcagggc < 1:724638/250‑8 (MQ=255) gtgGCGTAGTTTCTTCTTTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTccccccccctcagggc < 1:560273/239‑8 (MQ=255) tgGCGTAGTTTCTTCTTTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTc < 1:480671/250‑1 (MQ=255) cGTAGTTTCTTCTTTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTccccc < 1:882293/251‑1 (MQ=255) ttcttTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGa < 1:590203/251‑1 (MQ=255) tcttTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTccccccccctcagggc < 1:693899/225‑8 (MQ=255) ccccTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAg > 1:746834/1‑251 (MQ=255) ctTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTccccccccctcagggc < 1:15764/215‑8 (MQ=255) ctTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAggg < 1:516605/243‑1 (MQ=255) ctTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAg > 1:288663/1‑251 (MQ=255) ctTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAAGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGGGCCAAg > 1:754041/1‑251 (MQ=255) gAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGttt > 1:730824/1‑249 (MQ=255) gagTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAagt < 1:63233/249‑1 (MQ=255) gagTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAag > 1:657752/1‑248 (MQ=255) gAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTAc < 1:52326/250‑1 (MQ=255) aaCGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACaa < 1:553490/251‑1 (MQ=255) cGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATg < 1:41699/251‑1 (MQ=255) cGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATg < 1:81856/251‑1 (MQ=255) cGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTCCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAAc < 1:425517/206‑1 (MQ=255) gTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTccccccccctcagggc < 1:293278/175‑8 (MQ=255) tctcCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGtt > 1:314580/1‑251 (MQ=255) tctcCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGtt < 1:876185/251‑1 (MQ=255) cccGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTc > 1:351018/1‑250 (MQ=255) gACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTccccccccctcagggc < 1:642876/159‑8 (MQ=255) gACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTccccccccctcagggc > 1:577318/1‑152 (MQ=255) caGCTGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTAc < 1:729028/218‑1 (MQ=255) aaaCATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAg > 1:570037/1‑222 (MQ=255) cATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTGCGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCTCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAAc < 1:40340/217‑1 (MQ=255) cATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAagt < 1:803778/199‑1 (MQ=255) cATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACGGCTGTGGtcgggaga > 1:894417/1‑226 (MQ=255) aTTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACGGCTGTGGtcgggag < 1:149800/231‑7 (MQ=255) ttATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGcc > 1:802416/1‑172 (MQ=255) ttATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAagta > 1:309034/1‑198 (MQ=255) ataATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGtt > 1:624899/1‑223 (MQ=255) ataATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGtt > 1:497779/1‑223 (MQ=255) taATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTccccccccc > 1:672173/1‑129 (MQ=255) aaTTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGtt > 1:140671/1‑221 (MQ=255) atTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACGGCTGTGGtcgggag > 1:805056/1‑209 (MQ=255) ttttAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTc > 1:387442/1‑167 (MQ=255) gCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACaa > 1:170041/1‑175 (MQ=255) gCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAATTGCGTgaga > 1:3273/1‑251 (MQ=255) gTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCGCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATg < 1:233502/154‑1 (MQ=255) gTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAAt < 1:500474/219‑1 (MQ=255) ggATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAATTGCGTGAGAAAACGCGCGCTATCCCGCTTATGAACAAATATTTCActtatct < 1:242776/250‑1 (MQ=255) gATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑CCCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAATTGCGTGAGAAAACGCGCGCTATCCCGCTTATGAACAAata > 1:207560/1‑238 (MQ=255) aTCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAAt > 1:459356/1‑192 (MQ=255) aTCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAATTGCGTGAGAAAACgcgcgc > 1:20837/1‑211 (MQ=255) tGCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAATTGCGTGAGAAAACGCGCGCTATCCCGCTTATGAACAAATATTTCACTTATCTTATCGCACTCATTTTCGGCGCTGCCGGCgt > 1:626301/1‑251 (MQ=255) gCTTAAAAATTGAGATTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGc > 1:791368/1‑134 (MQ=255) gagaTTTT‑‑CCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAATTGCGTGAGAAAACGCGCGCTATCCCGCTTATGAACAAATATTTCActtatctt > 1:219079/1‑210 (MQ=255) || GAGGAAGAGGTTGTGGCGTAGTTTCTTCTTTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTCCCCCCCCCCCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAATTGCGTGAGAAAACGCGCGCTATCCCGCTTATGAACAAATATTTCACTTATCTTATCGCACTCATTTTCGGCGCTGCCGGCGT > 1/994517‑994984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |