| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 778,888 | 3 bp→ATT | intergenic (+44015/+42943) | unknown → / ← unknown | tRNA‑Asn‑GTT/tRNA‑Thr‑GGT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 778,888 | 0 | T | A | 100.0% | 40.0 / NA | 13 | intergenic (+44015/+42945) | unknown/unknown | tRNA‑Asn‑GTT/tRNA‑Thr‑GGT |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (6/7); total (6/7) | |||||||||||
| * | 1 | 778,889 | 0 | G | T | 100.0% | 39.4 / NA | 13 | intergenic (+44016/+42944) | unknown/unknown | tRNA‑Asn‑GTT/tRNA‑Thr‑GGT |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (6/7); total (6/7) | |||||||||||
| * | 1 | 778,890 | 0 | A | T | 100.0% | 39.9 / NA | 13 | intergenic (+44017/+42943) | unknown/unknown | tRNA‑Asn‑GTT/tRNA‑Thr‑GGT |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (6/7); total (6/7) | |||||||||||
ATCCGCCGTTAAATAAGTTCTATTCAATTCGGGCTAAAAAACCACACGAAACATTAAAGAAACGTCGTAACTTTTTAAAACTATGCCCGGATGCTAGTGATGATTCAGTGAACCAGGCTTTATCTACAAAATGCGCCCGCAAGCCGTTCAGTCGAAAATGTATATTTAAATAAAAACATAAACACATATAAAAATAAAAGCATAAATTGATATTTATGCTTTTATTG‑TTTTTGAGGTGATATAAAGCAACGGCTATATTACAAATTCACGCCCTTTTGCCAAGAAAGCGGAAATATAAACCCTGCCATTCCGCACAATAAATTTTACGCTATGCCCGTTTTTAACCGTATAGATATGAAATCGACCATCATTATAAGCGGTTGCTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAGCGAAAAGAAACTT > 1/778681‑779123 ||| aTCCGCCGTTAAATAAGGTCTATTCAAATCGGGCTAAAAAACCACACGAAACATTAAAGAAACGTCGTAATTTTTTAAAATTGTGTCCAAATTCTAACGAGGACTCTATTAATCAAGCATTATCGAGCAAATGCGCCCGCAAGCCGTTTAGTCGAAGATGTATGTTTAAATAAAAACATAAATATACTTAAGAATAAAAGCATAAATATTTATTTATACTTTTATTGTTTTTTGAGGTGATATAACGCacc < 1:357263/251‑3 (MQ=255) aaTAAGTTCTATTCAATTCGGGCTAAAAAACCACACGAAACATTAAAGAAACGTCGTAATTTTTTAAAATTGTGTCCAAATTCTAACGAGGACTCTATTAATCAAGCATTATCGAGCAAATGCGCCCGCAAGCCGTTTAGTCGAAGATGTATGTTTAAATAAAAACATAAATATACTTAAGAATAAAAGCATAAATATTTATTTATACTTTTATTGTTTTTTGAGGTGATATAACGCACCGGCTATATTa > 1:603365/1‑250 (MQ=255) aTAAGTTCTATTCAATTCGGGCTAAAAAACCACACGAAACATTAAAGAAACGTCGTAATTTTTTAAAATTGTGTCCAAATTCTAACGAGGACTCTATTAATCAAGCATTATCGAGCAAATGCGCCCGCAAGCCGTTTAGTCGAAGATGTATGTTTAAATAAAAACATAAATATACTTAAGAATAAAAGCATAAATATTTATTTATACTTTTATTGTTTTTTGAGGTGATATaa > 1:344237/1‑233 (MQ=255) aTTCAATTCGGGCTAAAAAACCACACGAAACATTAAAGAAACGTCGTAATTTTTTAAAATTGTGTCCAAATTCTAACGAGGACTCTATTAATCAAGCATTATCGAGCAAATGCGCCCGCAAGCCGTTTAGTCGAAGATGTATGTTTAAATAAAAACATAAATATACTTAAGAATAAAAGCATAAATATTTATTTATACTTTTATTGTTTTTTGAGGTGATATAACGCACCGGCTATATTACAAATTcccg > 1:724935/1‑247 (MQ=255) ggCTAAAAAACCACACGAAACATTAAAGAAACGTCGTAATTTTTTAAAATTGTGTCCAAATTCTAACGAGGACTCTATTAATCAAGCATTATCGAGCAAATGCGCCCGCAAGCCGTTTAGTCGAAGATGTATGTTTAAATAAAAACATAAATATACTTAAGAATAAAAGCATAAATATTTATTTATACTTTTATTGTTTTTTGAGGTGATATAACGCACCGGCTATATTACAAATTCCCGCCCTTTTGcta > 1:17085/1‑249 (MQ=255) ttatcgagcaaaTGCGCCCGCAAGCCGTTTAGTCGAAGATGTATGTTTAAATAAAAACATAAATATACTTAAGAATAAAAGCATAAATATTTATTTATACTTTTATTGTTTTTTGAGGTGATATAACGCACCGGCTATATTACAAATTCCCGCCCTTTTGCTAAGAAAGCGGAAATATAAACCCTGTCATTCCGCACAATAAATTTTACGCTATGCCCGTTCTTAACCGTATAGATATGAAATCGACcat > 1:33572/10‑250 (MQ=255) aTGCGCCCGCAAGCCGTTTAGTCGAAGATGTATGTTTAAATAAAAACATAAATATACTTAAGAATAAAAGCATAAATATTTATTTATACTTTTATTGTTTTTTGAGGTGATATAACGCACCGGCTATATTACAAATTCCCGCCCTTTTGCTAAGAAAGCGGAAATATAAACCCTGTCATTCCGCACAATAAATTTTACGCTATGCCCGTTCTTAACCGTATAGATATGAAATCGACCATCATTATAAGCgg < 1:867792/251‑1 (MQ=255) cGTTTAGTCGAAGATGTATGTTTAAATAAAAACATAAATATACTTAAGAATAAAAGCATAAATATTTATTTATACTTTTATTGTTTTTTGAGGTGATATAACGCACCGGCTATATTACAAATTCCCGCCCTTTTGCTAAGAAAGCGGAAATATAAACCCTGTCATTCCGCACAATAAATTTTACGCTATGCCCGTTCTTAACCGTATAGATATGAAATCGACCATCATTATAAGCGGTTGCTACATAGGAt < 1:744425/251‑1 (MQ=255) gatgtatgtTTAAATAAAAACATAAATATACTTAAGAATAAAAGCATAAATATTTATTTATACTTTTATTGTTTTTTGAGGTGATATAACGCACCGGCTATATTACAAATTCCCGCCCTTTTGCTAAGAAAGCGGAAATATAAACCCTGTCATTCCGCACAATAAATTTTACGCTATGCCCGTTCTTAACCGTATAGATATGaaa < 1:817033/204‑1 (MQ=255) taaataaaAACATAAATATACTTAAGAATAAAAGCATAAATATTTATTTATACTTTTATTGTTTTTTGAGGTGATATAACGCACCGGCTATATTACAAATTCCCGCCCTTTTGCTAAGAAAGCGGAAATATAAACCCTGTCATTCCGCACAATAAATTTTACGCTATGCCCGTTCTTAACCGTATAGATATGAAATCGACCATCATTATAAGCGGTTGCTACATAGGATAGTTTTTGGGTCAGTTCTCTaa < 1:685692/251‑1 (MQ=255) aaaaaCATAAATATACTTAAGAATAAAAGCATAAATATTTATTTATACTTTTATTGTTTTTTGAGGTGATATAACGCACCGGCTATATTACAAATTCCCGCCCTTTTGCTAAGAAAGCGGAAATATAAACCCTGTCATTCCGCACAATAAATTTTACGCTATGCCCGTTCTTAACCGTATAGATATGAAATCGACCATCATTATAAGCGGTTGCTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTcc < 1:179223/251‑1 (MQ=255) gaataaaaGCATAAATATTTATTTATACTTTTATTGTTTTTTGAGGTGATATAACGCACCGGCTATATTACAAATTCCCGCCCTTTTGCTAAGAAAGCGGAAATATAAACCCTGTCATTCCGCACAATAAATTTTACGCTATGCCCGTTCTTAACCGTATAGATATGAAAt < 1:588393/170‑1 (MQ=255) taaaaGCATAAATATTTATTTATACTTTTATTGTTTTTTGAGGTGATATAACACACCGGCTATATTACAAATTCCCGCCCTTTTGCTAAGAAAGCGGAAATATAAACCCTGTCATTCCGCACAATAAATTTTACGCTATGCCCGTTCTTAACCGTATAGATATGAAATCGACCATCATTATAAGCGGTTGCTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGaaattt > 1:224829/1‑247 (MQ=255) ||| ATCCGCCGTTAAATAAGTTCTATTCAATTCGGGCTAAAAAACCACACGAAACATTAAAGAAACGTCGTAACTTTTTAAAACTATGCCCGGATGCTAGTGATGATTCAGTGAACCAGGCTTTATCTACAAAATGCGCCCGCAAGCCGTTCAGTCGAAAATGTATATTTAAATAAAAACATAAACACATATAAAAATAAAAGCATAAATTGATATTTATGCTTTTATTG‑TTTTTGAGGTGATATAAAGCAACGGCTATATTACAAATTCACGCCCTTTTGCCAAGAAAGCGGAAATATAAACCCTGCCATTCCGCACAATAAATTTTACGCTATGCCCGTTTTTAACCGTATAGATATGAAATCGACCATCATTATAAGCGGTTGCTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAGCGAAAAGAAACTT > 1/778681‑779123 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |