| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,992,825 | T→C | intergenic (+143449/‑7167) | unknown → / → unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,992,825 | 0 | T | C | 100.0% | 250.8 / NA | 75 | intergenic (+143449/‑7167) | unknown/unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (40/35); total (40/35) | |||||||||||
GGCAAGGGCAAGGCACTTCGGTGATGGAAGTTAGCCACCGTGGCAAATTGTTCATGGAATTAATCACCCAATCCCAAGCGGATTTTCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCTGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACGGCGTGTTGGTAGGCGATTTCTCTTCCACCATTCTCTCCCGCAAAGTGGATGTCAGCAAATTCGGCTTAATTTATGCC > 1/1992580‑1993070 | ggcaagggcaagGCACTTCGGTGATGGAAGTTAGCCACCGTGGCAAATTGTTCATGGAATTAATCACCCAATCCCAAGCGGATTTTCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTc > 1:715170/1‑250 (MQ=255) ggcaaggCACTTCGGTGATGGAAGTTAGCCACCGTGGCAAATTGTTCATGGAATTAATCACCCAATCCCAAGCGGATTTTCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCgg < 1:361587/250‑1 (MQ=255) gCACTTCGGTGATGGAAGTTAGCCACCGTGGCAAATTGTTCATGGAATTAATCACCCAATCCCAAGCGGATTTTCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAAtt > 1:169238/1‑251 (MQ=255) ttCGGTGATGGAAGTTAGCCACCGTGGCAAATTGTTCATGGAATTAATCACCCAATCCCAAGCGGATTTTCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACg < 1:308119/251‑1 (MQ=255) tAGCCACCGTGGCAAATTGTTCATGGAATTAATCACCCAATCCCAAGCGGATTTTCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTgg < 1:256669/251‑1 (MQ=255) aCCGTGGCAAATTGTTCATGGAATTAATCACCCAATCCCAAGCGGATTTTCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCg < 1:766358/251‑1 (MQ=255) ccGTGGCAAATTGTTCATGGAATTAATCACCCAATCCCAAGCGGATTTTCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAAc > 1:401641/1‑248 (MQ=255) ccGTGGCAAATTGTTCATGGAATTAATCACCCAATCCCAAGCGGATTTTCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCgg > 1:414975/1‑251 (MQ=255) ggCAAATTGTTCATGGAATTAATCACCCAATCCCAAGCGGATTTTCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAatat > 1:826131/1‑236 (MQ=255) cACCCAATCCCAAGCGGATTTTCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAg > 1:187512/1‑251 (MQ=255) cccAATCCCAAGCGGATTTTCGTAAGCTCTTTAACGTTCCTGAAAACTATCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTGCCTTCGGCGAAATTGACGAAATCAATATTCTGGAAc < 1:429184/219‑1 (MQ=255) cccAATCCCAAGCGGATTTTCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCGCTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGAt < 1:677990/251‑1 (MQ=255) cccAATCCCAAGCGGATTTTCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGAt > 1:701654/1‑251 (MQ=255) aTCCCAAGCGGATTTTCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCa > 1:783099/1‑251 (MQ=255) cAAGCGGATTTTCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGa < 1:847034/251‑1 (MQ=255) ttCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGaa > 1:788283/1‑251 (MQ=255) ttCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGaa > 1:612729/1‑251 (MQ=255) tCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAAc < 1:575902/251‑1 (MQ=255) gCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGAtt > 1:377378/1‑227 (MQ=255) gCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACg > 1:548415/1‑251 (MQ=255) ctctATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATAc < 1:152638/249‑1 (MQ=255) ctctATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGa > 1:708316/1‑251 (MQ=255) tctATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGAt < 1:745340/251‑1 (MQ=255) ctATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTgg < 1:409657/188‑1 (MQ=255) ctATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGAtt > 1:415951/1‑251 (MQ=255) ctATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGAtt > 1:417891/1‑251 (MQ=255) tataACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTa < 1:523403/251‑1 (MQ=255) ccTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCg < 1:391502/229‑1 (MQ=255) ccTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTa > 1:98806/1‑251 (MQ=255) cTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTAc < 1:651654/251‑1 (MQ=255) aaaaCTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTg < 1:173862/250‑1 (MQ=255) cTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGAt < 1:801116/232‑1 (MQ=255) aCCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCcgaa > 1:35242/1‑250 (MQ=255) aCCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCcgaa > 1:191445/1‑250 (MQ=255) cTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGACAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCAt > 1:13999/1‑251 (MQ=255) gCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTAc < 1:238580/226‑1 (MQ=255) aGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAg > 1:35698/1‑170 (MQ=255) aGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGc > 1:83303/1‑218 (MQ=255) gTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACg > 1:393140/1‑129 (MQ=255) gTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTAc < 1:533317/209‑1 (MQ=255) gTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGAtgtg > 1:603466/1‑251 (MQ=255) aTTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTa < 1:314484/195‑1 (MQ=255) ccgccATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGt < 1:195041/250‑1 (MQ=255) ttCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAAc < 1:643494/251‑1 (MQ=255) gAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGc > 1:553242/1‑182 (MQ=255) aaTTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACGGCGTGtt > 1:740846/1‑251 (MQ=255) aTTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACGGCGTGTTg > 1:459527/1‑251 (MQ=255) ttattaCGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACGGCGTGTTGGt < 1:735644/251‑1 (MQ=255) ttaCGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACGGCGTGTTGGTAgg < 1:879034/251‑1 (MQ=255) cGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGc < 1:385676/164‑1 (MQ=255) gCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGAt < 1:378932/150‑1 (MQ=255) gCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGt > 1:489525/1‑212 (MQ=255) gTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGAt > 1:153631/1‑145 (MQ=255) gTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTAc < 1:198404/157‑1 (MQ=255) gTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTg < 1:509352/159‑1 (MQ=255) gTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAACCCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGc > 1:433947/1‑211 (MQ=255) gTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACTGCGTGCTGGTAGGCGATTTCTCTTCCACCATtct > 1:679889/1‑249 (MQ=255) gTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACGGCGTGTTGGTAGGCGATTTCTCTTccac < 1:478066/243‑1 (MQ=255) gTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACGGCGTGTTGGTAGGCGATTTCTCTTc > 1:786901/1‑240 (MQ=255) gTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACGGCGTGTTGGTAGGCGATTTCTCTTCCACCATtct > 1:340124/1‑249 (MQ=255) gTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCAAATGTAGGCAACGGCGTGTTGGTAGGCGATTTCTCTTCCACCATtct > 1:687066/1‑249 (MQ=255) gTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGAGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACGGCGTGTTGGTAGGCGATTTCTCTTCCACCATtct > 1:327289/1‑249 (MQ=255) gTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGCAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACGGCGTGTTGGTAGGCGATTTCTCTTCCACCATtct > 1:674173/1‑249 (MQ=255) tATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAAc > 1:91954/1‑85 (MQ=255) tATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGAtg > 1:194890/1‑196 (MQ=255) aTTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACGGCGTGTTGGTAGGCGATTTCTCTTCCACCATTCTCTcc < 1:109091/251‑1 (MQ=255) accAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACGGCGTGTTGGTAGGCGATTTCTCTTCCACCATTCTCTCCCGCaa < 1:194853/249‑1 (MQ=255) gCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTAc < 1:533723/146‑1 (MQ=255) ggTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGAt < 1:821911/105‑1 (MQ=255) ggTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACGGCGTGTTGGTAGGCGATTTCTCTTCCACCATTCTCTCCCGCAAAGTGGa > 1:344608/1‑251 (MQ=255) gTCACTGGTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGAt > 1:307879/1‑104 (MQ=255) gTCTGCCACCGCCGCCAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGc < 1:166563/190‑1 (MQ=255) ccAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATACTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACGGCGTGTTGGTAGGCGATTTCTCTTCCACCATTCTCTCCCGCAAAGTGGATGTCAGCAAATTCGGCTTAAtt > 1:78580/1‑251 (MQ=255) cAAAGAAGCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACGGCGTGTTGGTAGGCGATTTCTCTTCCACCATTCTCTCCCGCAAAGTGGATGTCAGCAAATTCGGCTTAAttt < 1:157310/251‑1 (MQ=255) aagCCCGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACGGCGTGTTGGTAGGCGATTTCTCTTCCACCATTCTCTCCCGCAAAGTGGATGTCAGCAAATTCGGCTTAATTTATGcc < 1:212206/251‑1 (MQ=255) | GGCAAGGGCAAGGCACTTCGGTGATGGAAGTTAGCCACCGTGGCAAATTGTTCATGGAATTAATCACCCAATCCCAAGCGGATTTTCGTAAGCTCTATAACGTTCCTGAAAACTACCAAATCCTGTTTTTGCAAGGCGGTGCGCGCGGTCAATTCGCCGCCATTCCGATGAATTTATTACGTGAAAACGGCAAAGCCCTGTATTTAAACAGCGGTCACTGGTCTGCCACCGCCGCCAAAGAAGCCTGTTCCTTCGGCGAAATTGACGAAATCAATATTCTGGAACCGGGTGACGAATTAAAAGTAAAACCTTTAGATTTCAGCGACATCGCCGAACAATACGATTATGTGCATTACTGCCCGAACGAAACCATCAGCGGCGTAGAAATTTTTGATGTGCCGAATGTAGGCAACGGCGTGTTGGTAGGCGATTTCTCTTCCACCATTCTCTCCCGCAAAGTGGATGTCAGCAAATTCGGCTTAATTTATGCC > 1/1992580‑1993070 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |