| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,851,912 | T→C | intergenic (+2536/‑148080) | unknown → / → unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,851,912 | 0 | T | C | 100.0% | 270.2 / NA | 77 | intergenic (+2536/‑148080) | unknown/unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (37/40); total (37/40) | |||||||||||
CATCACCGCCGTTCGCCCACACTTCTTTGCTACCGGCAATCTCTTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATTAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCACGACGATACCGGCGGCGAC > 1/1851665‑1852157 | cATCACCGCCGTTCGCCCACACTTCTTTGCTACCGGCAATCTCTTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAgg < 1:281942/251‑1 (MQ=255) tCACCGCCGTTCGCCCACACTTCTTTGCTACCGGCAATCTCTTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCg > 1:260513/1‑251 (MQ=255) ccgccgTTCGCCCACACTTCTTTGCTACCGGCAATCTCTTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGAt > 1:600820/1‑250 (MQ=255) ccgTTCGCCCACACTTCTTTGCTACCGGCAATCTCTTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCTGTATTCACCGCAACAATCAGGCGATCGc > 1:721958/1‑250 (MQ=255) cacTTCTTTGCTACCGGCAATCTCTTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCg > 1:506069/1‑234 (MQ=255) cGGCAATCTCTTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATAc < 1:141934/251‑1 (MQ=255) ctctTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACggg > 1:501520/1‑230 (MQ=255) ttCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGAc < 1:738978/251‑1 (MQ=255) cTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGa < 1:392306/250‑1 (MQ=255) aaTCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCaaa < 1:705012/251‑1 (MQ=255) ccTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAgg < 1:43655/189‑1 (MQ=255) cACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAaacaa > 1:416615/1‑250 (MQ=255) aaTCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGTAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATCCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTc < 1:454523/251‑1 (MQ=255) aaTCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGAc > 1:497416/1‑219 (MQ=255) cacTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGAc > 1:814883/1‑209 (MQ=255) tCACCGATTAAACGCTGTGGCGTATCTTCACCGAATGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGAc < 1:454838/205‑1 (MQ=255) tCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTc < 1:333850/237‑1 (MQ=255) aTTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACg > 1:468635/1‑251 (MQ=255) aTTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACg > 1:519626/1‑251 (MQ=255) aTTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCC‑AATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGa > 1:222005/1‑251 (MQ=255) gCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATcc > 1:376099/1‑176 (MQ=255) gCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGAc < 1:406477/192‑1 (MQ=255) ggCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCaaa > 1:616513/1‑155 (MQ=255) ggCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAg > 1:884032/1‑251 (MQ=255) gCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAaac < 1:187235/207‑1 (MQ=255) ttCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACgg < 1:700679/251‑1 (MQ=255) aCGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTc < 1:748517/251‑1 (MQ=255) aCGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTc < 1:608274/251‑1 (MQ=255) gCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATc < 1:777130/184‑1 (MQ=255) gCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCt < 1:853471/224‑1 (MQ=255) gCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGt > 1:6269/1‑251 (MQ=255) accaaccaGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTc < 1:675125/251‑1 (MQ=255) aaccaGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGCCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCg > 1:597077/1‑250 (MQ=255) ccaGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCtt < 1:224012/251‑1 (MQ=255) ccaGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCtt < 1:743148/251‑1 (MQ=255) gTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACg > 1:741995/1‑196 (MQ=255) gTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACg > 1:269424/1‑229 (MQ=255) gTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCgg > 1:765738/1‑251 (MQ=255) gTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGCACGCTCCTCGACTTTTAGGCGCTTTACCGAAACGTCCGTATTCACCGCCACAATCAGGCGATCGCCAAATTTACGCGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTATTCACCACGATATATCGACAGCTTAAAGGTCTCTTTCAGTTCCgatttgg > 1:483974/1‑245 (MQ=255) aGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATc > 1:167805/1‑161 (MQ=255) cACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGt < 1:690944/217‑1 (MQ=255) ccGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGtt > 1:318092/1‑251 (MQ=255) gCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAaacaac < 1:402349/154‑1 (MQ=255) gCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACgg > 1:42531/1‑202 (MQ=255) cATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTGTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGc < 1:550643/251‑1 (MQ=255) tGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCa < 1:527341/251‑1 (MQ=255) tGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCa < 1:592604/251‑1 (MQ=255) ggAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGa < 1:8056/250‑1 (MQ=255) aaGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAAt < 1:640136/250‑1 (MQ=255) aaGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATg > 1:639716/1‑251 (MQ=255) gCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAgc > 1:391115/1‑226 (MQ=255) gCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATgg > 1:318731/1‑250 (MQ=255) ccAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCa > 1:373967/1‑251 (MQ=255) aCGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACgg < 1:71042/251‑1 (MQ=255) ctcctcGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGAc < 1:596805/98‑1 (MQ=255) ctcctcGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTg > 1:37740/1‑251 (MQ=255) ttAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGAc < 1:415721/251‑1 (MQ=255) tAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACg < 1:269354/251‑1 (MQ=255) tAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACg < 1:639051/251‑1 (MQ=255) tAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACg < 1:664178/251‑1 (MQ=255) tAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACg < 1:333597/251‑1 (MQ=255) gCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTg > 1:266210/1‑250 (MQ=255) ttACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAAt > 1:725324/1‑251 (MQ=255) ttACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAAt > 1:83790/1‑251 (MQ=255) aaTCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGcc < 1:819737/250‑1 (MQ=255) aaTCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGcc > 1:789958/1‑250 (MQ=255) cGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCacg > 1:303119/1‑251 (MQ=255) gTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCacga > 1:173533/1‑251 (MQ=255) tCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTcc < 1:201753/207‑1 (MQ=255) tCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCacgac < 1:519586/251‑1 (MQ=255) tCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCacga > 1:12133/1‑250 (MQ=255) cACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCACGACGATACcgg > 1:624962/1‑251 (MQ=255) ccGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTcc < 1:276217/197‑1 (MQ=255) ccGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACg > 1:146447/1‑222 (MQ=255) ccGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCACGACGATAc < 1:290192/246‑1 (MQ=255) aacaaTCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGA‑TTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCACGACGATACCGGCGGCGAc < 1:563250/251‑1 (MQ=255) acaaTCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCACGACGATACCGGCGGCGAc < 1:544701/251‑1 (MQ=255) | CATCACCGCCGTTCGCCCACACTTCTTTGCTACCGGCAATCTCTTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATTAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCACGACGATACCGGCGGCGAC > 1/1851665‑1852157 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |