Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,830,564 T→C intergenic (+56212/‑18727) unknown → / → unknown tRNA‑Asn‑GTT/tRNA‑Leu‑CAA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,830,5640TC100.0% 281.8 / NA 81intergenic (+56212/‑18727)unknown/unknowntRNA‑Asn‑GTT/tRNA‑Leu‑CAA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (39/42);  total (39/42)

CCTTGAGCGTTGGTTTGAAAAATTCTTCCAAAACGTCAAAGATAAACCGGCGGTCGTTGTAACCGAAGGCATTGAGCCGATGTCAATTCATGAAGGTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATTAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGAAACCGTCAAAGCCAACAATATTCCGGTCGTATTCAGTGAAAGCACCATCTCCCCGAAAC  >  1/1830318‑1830805
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                 
ccTTGAGCGTTGGTTTGAAAAATTCTTCCAAAACGTCAAAGATAAACCGGCGGTCGTTGTAACCGAAGGCATTGAGCCGATGTCAATTCATGAAGGTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAg                                                                                                                                                                                                                                               <  1:108270/251‑1 (MQ=255)
             tttGAAAAATTCTTCCAAAACGTCAAAGATAAACCGGCGGTCGTTGTAACCGAAGGCATTGAGCCGATGTCAATTCATGAAGGTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAAcc                                                                                                                                                                                                                                  <  1:525906/251‑1 (MQ=255)
             tttGAAAAATTCTTCCAAAACGTCAAAGATAAACCGGCGGTCGTTGTAACCGAAGGCATTGAGCCGATGTCAATTCATGAAGGTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAAc                                                                                                                                                                                                                                   <  1:352336/250‑1 (MQ=255)
               tGAAAAATTCTTCCAAAACGTCAAAGATAAACCGGCGGTCGTTGTAACCGAAGGCATTGAGCCGATGTCAATTCATGAAGGTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGt                                                                                                                                                                                                                                <  1:565773/251‑1 (MQ=255)
                                  gTCAAAGATAAACCGGCGGTCGTTGTAACCGAAGGCATTGAGCCGATGTCAATTCATGAAGGTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGcaca                                                                                                                                                                                                             >  1:514383/1‑251 (MQ=255)
                                           aaaCCGGCGGTCGTTGTAACCGAAGGCATTGAGCCGATGTCAATTCATGAAGGTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGa                                                                                                                                                                                                    <  1:615666/251‑1 (MQ=255)
                                                        ttGTAACCGAAGGCATTGAGCCGATGTCAATTCATGAAGGTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCgttgg                                                                                                                                                                                       >  1:623296/1‑251 (MQ=255)
                                                           tAACCGAAGGCATTGAGCCGATGTCAATTCATGAAGGTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCgttggtt                                                                                                                                                                                     <  1:515200/250‑1 (MQ=255)
                                                           tAACCGAAGGCATTGAGCCGATGTCAATTCATGAAGGTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCgttggtt                                                                                                                                                                                     <  1:668043/250‑1 (MQ=255)
                                                                    gCATTGAGCCGATGTCAATTCATGAAGGTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGcac                                                                                                                                                                                                              >  1:323350/1‑216 (MQ=255)
                                                                    gCATTGAGCCGATGTCAATTCATGAAGGTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCgt                                                                                                                                                                                          >  1:31272/1‑236 (MQ=255)
                                                                    gCATTGAGCCGATGTCAATTCATGAAGGTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAg                                                                                                                                                                            >  1:96428/1‑250 (MQ=255)
                                                                         gAGCCGATGTCAATTCATGAAGGTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGt                                                                                                                                                                                                                                >  1:901828/1‑193 (MQ=255)
                                                                                        cATGAAGGTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTAttt                                                                                                                                                       <  1:533656/251‑1 (MQ=255)
                                                                                        cATGAAGGTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTAttt                                                                                                                                                       <  1:160301/251‑1 (MQ=255)
                                                                                              ggTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACg                                                                                                                                                 >  1:335477/1‑251 (MQ=255)
                                                                                                  cGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGAt                                                                                                                                             <  1:254262/251‑1 (MQ=255)
                                                                                                    tACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGa                                                                                                                                                                                                    <  1:820445/194‑1 (MQ=255)
                                                                                                       acCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACgg                                                                                                                                        <  1:24386/251‑1 (MQ=255)
                                                                                                       acCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGAGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACgg                                                                                                                                        <  1:485879/251‑1 (MQ=255)
                                                                                                        ccGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGt                                                                                                                                       >  1:357602/1‑251 (MQ=255)
                                                                                                        ccGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGt                                                                                                                                       <  1:786036/251‑1 (MQ=255)
                                                                                                                      ccgCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACgg                                                                                                                                        <  1:542544/236‑1 (MQ=255)
                                                                                                                           tGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTtgt                                                                                                                    >  1:833014/1‑251 (MQ=255)
                                                                                                                           tGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTtgt                                                                                                                    >  1:113499/1‑251 (MQ=255)
                                                                                                                            gCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTAtt                                                                                                                       >  1:332579/1‑247 (MQ=255)
                                                                                                                              cTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGc                                                                                                                 <  1:876763/251‑1 (MQ=255)
                                                                                                                                  aTGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAg                                                                                                                                                     <  1:493033/211‑1 (MQ=255)
                                                                                                                                        ccTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAag                                                                                                                                >  1:582904/1‑226 (MQ=255)
                                                                                                                                        ccTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTtg                                                                                                                     <  1:675265/237‑1 (MQ=255)
                                                                                                                                        ccTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGc                                                                                                       <  1:168243/251‑1 (MQ=255)
                                                                                                                                          ttCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACg                                                                                                        >  1:428549/1‑248 (MQ=255)
                                                                                                                                            ccAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAg                                                                                                   >  1:133717/1‑251 (MQ=255)
                                                                                                                                                 gCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGAt                                                                                                                                                                                                                                       <  1:423285/114‑1 (MQ=255)
                                                                                                                                                 gCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAg                                                                                                                                                                                                  >  1:504200/1‑151 (MQ=255)
                                                                                                                                                 gCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTAttt                                                                                                                      <  1:897465/227‑1 (MQ=255)
                                                                                                                                                 gCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGcaaca                                                                                              >  1:736969/1‑251 (MQ=255)
                                                                                                                                                 gCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGcaaca                                                                                              >  1:170254/1‑251 (MQ=255)
                                                                                                                                                   gTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAg                                                                                            >  1:722583/1‑251 (MQ=255)
                                                                                                                                                    ttAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAgg                                                                                           <  1:562069/251‑1 (MQ=255)
                                                                                                                                                     tAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATTTCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGc                                                                                          <  1:688238/251‑1 (MQ=255)
                                                                                                                                                     tAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGc                                                                                          <  1:261980/251‑1 (MQ=255)
                                                                                                                                                           aTGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAg                                                                                                                                                     >  1:819109/1‑186 (MQ=255)
                                                                                                                                                                    atatTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTg                                                                           >  1:237039/1‑251 (MQ=255)
                                                                                                                                                                     tatTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTaa                                                                                                          <  1:107580/219‑1 (MQ=255)
                                                                                                                                                                     tatTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGc                                                                                                       >  1:525584/1‑222 (MQ=255)
                                                                                                                                                                           aaaTGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAg                                                                    <  1:749569/251‑1 (MQ=255)
                                                                                                                                                                                    gATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTg                                                                                                                                                                                                                              >  1:165758/1‑88 (MQ=255)
                                                                                                                                                                                    gATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGcac                                                                                                                                                                                                              >  1:587952/1‑104 (MQ=255)
                                                                                                                                                                                    gATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGgcg                                                                                                                                                                    >  1:414349/1‑146 (MQ=255)
                                                                                                                                                                                    gATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGgcg                                                                                                                                                                    >  1:340914/1‑146 (MQ=255)
                                                                                                                                                                                    gATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAg                                                                                                                                                     >  1:134557/1‑161 (MQ=255)
                                                                                                                                                                                    gATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGcaacaa                                                                                             <  1:357936/217‑1 (MQ=255)
                                                                                                                                                                                    gATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGaaa                                                           >  1:15017/1‑251 (MQ=255)
                                                                                                                                                                                    gATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGaaa                                                           >  1:400792/1‑251 (MQ=255)
                                                                                                                                                                                    gATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGaaa                                                           >  1:663173/1‑251 (MQ=255)
                                                                                                                                                                                    gATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATACAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGaa                                                            >  1:802485/1‑250 (MQ=255)
                                                                                                                                                                                    gATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTCTATATCCAAAAAATCAAAGAATTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGt                                                                   >  1:162310/1‑243 (MQ=255)
                                                                                                                                                                                     aTTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAag                                                                                                                                <  1:30194/181‑1 (MQ=255)
                                                                                                                                                                                                 ccGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGAAACCGTCAAAGCcaa                                              >  1:278414/1‑251 (MQ=255)
                                                                                                                                                                                                      aaaTAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAg                                                                             >  1:765279/1‑215 (MQ=255)
                                                                                                                                                                                                        aTAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGAcc                                                                                                                                                                              <  1:545689/116‑1 (MQ=255)
                                                                                                                                                                                                         tAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAag                                                                                                                                >  1:306781/1‑161 (MQ=255)
                                                                                                                                                                                                         tAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGAAACCGTCAAAGCCAACAATATTc                                      <  1:743200/251‑1 (MQ=255)
                                                                                                                                                                                                         tAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGAAACCGTCAAAGCCAACAATATTc                                      <  1:211807/251‑1 (MQ=255)
                                                                                                                                                                                                             gAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGAAACCGTCAAAGCCAACAATATTc                                      >  1:137055/1‑247 (MQ=255)
                                                                                                                                                                                                              aaaCATACGAAAAAAATACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGAAACCGTCAAAGCCAACAATATTCCgg                                   <  1:320564/249‑1 (MQ=255)
                                                                                                                                                                                                                        aaaaaaTACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGAAACCGTCAAAGCCAACAATATTCCGGTCGTATTCAGTg                       >  1:76389/1‑251 (MQ=255)
                                                                                                                                                                                                                        aaaaaaTACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGCAATTGAAACCGTCAAAGCCAACAATATTCCGGTCGTATTCAGTg                       >  1:652531/1‑251 (MQ=255)
                                                                                                                                                                                                                             aTACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGc                                                                                                       <  1:865739/166‑1 (MQ=255)
                                                                                                                                                                                                                             aTACCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTg                                                              <  1:20534/207‑1 (MQ=255)
                                                                                                                                                                                                                               aCCGCACTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGAAACCGTCAAAGCCAACAATATTCCGGTCGTATTCAGTGAAAGCAc                <  1:664785/251‑1 (MQ=255)
                                                                                                                                                                                                                                     cTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAg                                                                                                                                                                                                  <  1:574294/67‑1 (MQ=255)
                                                                                                                                                                                                                                     cTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGAt                                                                                                                                             <  1:856546/120‑1 (MQ=255)
                                                                                                                                                                                                                                     cTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGcaac                                                                                <  1:778230/181‑1 (MQ=255)
                                                                                                                                                                                                                                     cTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGAAACCGTCAAAGCCAACAATATTCCGGTCGTATTCAGTGAAAGCACCAtct           >  1:351060/1‑250 (MQ=255)
                                                                                                                                                                                                                                     cTTTATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGAAACCGTCAAAGCCAACAATATTCCGGTCGTATTCAGTGAAAGCACCAtct           >  1:331518/1‑250 (MQ=255)
                                                                                                                                                                                                                                       ttATATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGAAAc                                                          <  1:523051/201‑1 (MQ=255)
                                                                                                                                                                                                                                           atCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGAAACCGTCAAAGCCAACAATATTCCGGTCGTATTCAGTGAAAGCACCATCTCCCCGaa    <  1:803306/251‑1 (MQ=255)
                                                                                                                                                                                                                                             ccAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTTTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGAAACCGTCAAAGCCAACAATATTCCGGTCGTATTCAGTGAAAGCACCATCTCCCCGAAAc  <  1:820792/251‑1 (MQ=255)
                                                                                                                                                                                                                                                  aaaTCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCgttggtt                                                                                                                                                                                     <  1:373500/67‑1 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                 
CCTTGAGCGTTGGTTTGAAAAATTCTTCCAAAACGTCAAAGATAAACCGGCGGTCGTTGTAACCGAAGGCATTGAGCCGATGTCAATTCATGAAGGTCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCACCTTCCAATGCGTTAATCTATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCGCAAAATAAAGAAACATACGAAAAAAATACCGCACTTTATATCCAAAAAATTAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCGGAAGCACAGCGTTGGTTGGTGACCAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAACAAGGCACGCCGCAACAAGTGCGTAAAGTAATTGAAACCGTCAAAGCCAACAATATTCCGGTCGTATTCAGTGAAAGCACCATCTCCCCGAAAC  >  1/1830318‑1830805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑