| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,685,329 | A→C | intergenic (‑59204/‑14215) | unknown ← / → unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,685,329 | 0 | A | C | 100.0% | 316.6 / NA | 90 | intergenic (‑59204/‑14215) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (44/46); total (44/46) | |||||||||||
TTACTTAATAAAGGGATATCGTTTGGCACTTCACCATTTTCAACCCAATTTCCGACCATTTCACATAAAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGACAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTATCCGCACCAAGCAACGCAAACATTCTACTATTGTTGTTACGGATTGCCCC > 1/1685095‑1685552 | ttACTTAATAAAGGGATATCGTTTGGCACTTCACCATTTTCAACCCAATTTCCGACCATTTCACATAAAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGt > 1:799289/1‑251 (MQ=255) aataaAGGGATATCGTTTGGCACTTCACCATTTTCAACCCAATTTCCGACCATTTCACATAAAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGaa > 1:259775/1‑251 (MQ=255) aaGGGATATCGTTTGGCACTTCACCATTTTCAACCCAATTTCCAACCATTTCACATAAAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTa > 1:766113/1‑251 (MQ=255) gggATATCGTTTGGCACTTCACCATTTTCAACCCAATTTCCGACCATTTCACATAAAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTAc > 1:748769/1‑250 (MQ=255) gggATATCGTTTGGCACTTCACCATTTTCAACCCAATTTCCGACCATTTCACATAAAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTAc > 1:870091/1‑250 (MQ=255) atatCGTTTGGCACTTCACCATTTTCAACCCAATTTCCGACCATTTCACAT‑AAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATc < 1:173388/251‑1 (MQ=255) tCGTTTGGCACTTCACCATTTTCAACCCAATTTCCGACCATTTCACATAAAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCAt > 1:592653/1‑251 (MQ=255) gTTTGGCACTTCACCATTTTCAACCCAATTTCCGACCATTTCACATAAAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATa > 1:775690/1‑250 (MQ=255) gCACTTCACCATTTTCAACCCAATTTCCGACCATTTCACATAAAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGcc < 1:721914/250‑1 (MQ=255) tCACCATTTTCAACCCAATTTCCGACCATTTCACATAAAATACGACGGAAATATTCGTGGCGAGGATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCa > 1:270976/1‑250 (MQ=255) ttCAACCCAATTTCCGACCATTTCACATAAAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTAt < 1:115757/251‑1 (MQ=255) aCCCAATTTCCGACCATTTCACATAAAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCAcg < 1:503929/251‑1 (MQ=255) cccAATTTCCGACCATTTCACATAAAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCAcg > 1:542089/1‑250 (MQ=255) aTTTCCGACCATTTCACATAAAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGAt > 1:469893/1‑251 (MQ=255) aCCATTTCACATAAAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAAc < 1:370306/250‑1 (MQ=255) aTTTCACATAAAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAAc > 1:401598/1‑247 (MQ=255) caTAAAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAAt < 1:778283/251‑1 (MQ=255) aaaTACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGtt > 1:285766/1‑251 (MQ=255) gAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTaa > 1:688527/1‑249 (MQ=255) tatTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATc < 1:794910/251‑1 (MQ=255) cGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTgg < 1:802743/251‑1 (MQ=255) ggCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATAc > 1:526275/1‑221 (MQ=255) gTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAAc > 1:528301/1‑234 (MQ=255) gTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCAt > 1:157144/1‑251 (MQ=255) ggATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCAt > 1:105156/1‑251 (MQ=255) aTAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATcc < 1:735125/251‑1 (MQ=255) aaGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCaa > 1:180146/1‑251 (MQ=255) gAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTAt < 1:398427/185‑1 (MQ=255) aaaCTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAAc < 1:138708/199‑1 (MQ=255) aCGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATgag > 1:53723/1‑251 (MQ=255) gTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGaa > 1:829295/1‑251 (MQ=255) gAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAg > 1:748777/1‑251 (MQ=255) aaTCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGt > 1:200305/1‑251 (MQ=255) aaTCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGt > 1:838577/1‑251 (MQ=255) aaTCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGt > 1:835337/1‑251 (MQ=255) gAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATc > 1:689228/1‑210 (MQ=255) gCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAAc > 1:566860/1‑180 (MQ=255) gCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCa > 1:816292/1‑251 (MQ=255) tACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATc < 1:479752/205‑1 (MQ=255) tACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATaa > 1:532933/1‑251 (MQ=255) tACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATaa > 1:871224/1‑251 (MQ=255) ccTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGGACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGt > 1:25041/1‑251 (MQ=255) ccTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATc < 1:30504/203‑1 (MQ=255) ccTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATcc > 1:646372/1‑213 (MQ=255) ccTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGt > 1:725343/1‑251 (MQ=255) ccTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGt > 1:299788/1‑251 (MQ=255) cTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGc > 1:232496/1‑207 (MQ=255) cTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTa < 1:516553/251‑1 (MQ=255) cTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTa < 1:440585/251‑1 (MQ=255) cTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTa < 1:346584/251‑1 (MQ=255) cTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTa < 1:29400/251‑1 (MQ=255) cTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTa < 1:125071/251‑1 (MQ=255) aCAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACg > 1:812173/1‑251 (MQ=255) cAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAAt < 1:553839/181‑1 (MQ=255) aaaTTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGAt < 1:776013/251‑1 (MQ=255) aaaTTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGAt < 1:316597/251‑1 (MQ=255) aTTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCa < 1:147625/251‑1 (MQ=255) ggCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACaaa < 1:639270/173‑1 (MQ=255) aataaACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCAt > 1:7289/1‑205 (MQ=255) aataaACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGa > 1:268071/1‑251 (MQ=255) aaaCCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATc < 1:749551/251‑1 (MQ=255) cccAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGAt < 1:382057/235‑1 (MQ=255) cAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCAt > 1:614534/1‑117 (MQ=255) cAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGc < 1:646813/195‑1 (MQ=255) cAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATc < 1:186735/251‑1 (MQ=255) aaTTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATcc < 1:558247/251‑1 (MQ=255) gagaAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATAc < 1:643117/114‑1 (MQ=255) agaAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTa < 1:886715/250‑1 (MQ=255) aaaGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTATcc < 1:660502/251‑1 (MQ=255) aGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCAc < 1:109614/119‑1 (MQ=255) ttGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTATCCGCAc < 1:569105/251‑1 (MQ=255) tGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTATCCGCAcc < 1:23069/251‑1 (MQ=255) gCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTATcc > 1:156070/1‑245 (MQ=255) gTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATAc < 1:480887/140‑1 (MQ=255) aGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTATCCGCAcc < 1:602941/245‑1 (MQ=255) tGACGTTCCATACCATCGTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGGGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTATCCGCACCAAGCAACGc < 1:802221/251‑1 (MQ=255) gTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATg < 1:755796/181‑1 (MQ=255) gTTCCATACCATCTTTTTGGTCATTAAACCACCAACCGGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTATCCGCACCAAGCAACGCaaa > 1:740421/1‑250 (MQ=255) ttCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTa < 1:334179/202‑1 (MQ=255) ttCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTATCCGCACCAAGCAACGCAAACa > 1:407179/1‑251 (MQ=255) ccATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATc < 1:842516/222‑1 (MQ=255) ccATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTATCCGCACCAAGCAACGCAAACATTctact < 1:272586/251‑1 (MQ=255) cTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTATCCGCACCAAGCAACGCAAACATTCTACTAttg < 1:869843/251‑1 (MQ=255) ttAAACCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTATCCGCACCAAGCAACGCAAACATTCTACTATTGTTGTTACGGAt < 1:251532/251‑1 (MQ=255) aaCCACCAACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTATCCGCACCAAGCAACGCAAACATTCTACTATTGTTGTTACGGATTGc < 1:405401/251‑1 (MQ=255) ccaccaACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAAc > 1:228476/1‑98 (MQ=255) caccaACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTATCCGCACCAAGCAACGCAAACATTCTACTATTGTTGTTACGGATTGcccc < 1:363212/251‑1 (MQ=255) caccaACCTGAACCAAATTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTAGCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTATCCGCACCAAGCAACGCAAACATTCTACTATTGTTGTTACGGATTGcccc < 1:435219/251‑1 (MQ=255) aaaTTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATg > 1:870286/1‑138 (MQ=255) aaaTTGAATTTTGCCAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTATCCGCAcc > 1:139346/1‑195 (MQ=255) | TTACTTAATAAAGGGATATCGTTTGGCACTTCACCATTTTCAACCCAATTTCCGACCATTTCACATAAAATACGACGGAAATATTCGTGGCGAGTATAGGATAAGAAACTACGTGAATCAGTGAGCATACCTACAAATTGGCTTAATAAACCCAATTGAGAAAGTTGCTGTAGTTGACGTTCCATACCATCTTTTTGGTCATTAAACCACCAACCTGAACCAAATTGAATTTTGACAGCTACCCCACCGGTTTGGAAATTACCAATCATACTGCCAATCACCTCGTTATCACGCGGATTCAAACAATACAAAATCGTTTTTGGTAACTGATCTTGGCAATCCATTGCATCCAATAAATGAGAAAGTGGCTCGGCATAAGTACGATCACCAATAGAATCAAATCCACTATCCGCACCAAGCAACGCAAACATTCTACTATTGTTGTTACGGATTGCCCC > 1/1685095‑1685552 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |