| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,644,350 | C→G | intergenic (‑18225/‑55194) | unknown ← / → unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,644,350 | 0 | C | G | 100.0% | 262.8 / NA | 76 | intergenic (‑18225/‑55194) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (40/36); total (40/36) | |||||||||||
GCCTTGCCATCGTGAACGTAAAAGTGGCAC‑AACCAAATAATCAA‑CCGCCGTTAAATGTGGATTTTTACTGGTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTCAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCGTTGTTATGCGATTTTCTGCAACATAATCAA > 1/1644115‑1644596 | gCCTTGCCATCGTGAACGTAAAAGTGGCAC‑AACCAAATAATCAA‑CCGCCGTTAAATGTGGATTTTTACTGGTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATg > 1:392785/1‑251 (MQ=255) ccttccccctggtaaacaaaaATGGCACAAAACAAAAAATCAACCCGCCGTTAAATGTGGATTTTTACTGGTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATg < 1:730993/234‑1 (MQ=255) gCCATCGTGAACGTAAAAGTGGCAC‑AACCAAATAATCAA‑CCGCCGTTAAATGTGGATTTTTACTGGTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATgcaag > 1:642456/1‑250 (MQ=255) c‑aACCAAATAATCAA‑CCGCCGTTAAATGTGGATTTTTACTGGTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTgg > 1:47221/1‑246 (MQ=255) aaaaaaaacAA‑CCGCCGTTAAATGTGGATTTTTACTGGTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAAc < 1:715446/243‑1 (MQ=255) taatCAA‑CCGCCGTTAAATGTGGATTTTTACTGGTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGt > 1:617807/1‑229 (MQ=255) atCAA‑CCGCCGTTAAATGTGGATTTTTACTGGTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAaataa > 1:569534/1‑206 (MQ=255) cccgccgTTAAATGTGGATTTTTACTGGTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACatgatg < 1:768500/250‑1 (MQ=255) ccgTTAAATGTGGATTTTTACTGGTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATgataa > 1:781201/1‑251 (MQ=255) ttAAATGTGGATTTTTACTGGTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATgataagat < 1:737953/251‑1 (MQ=255) tgtgGATTTTTACTGGTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGc < 1:174234/251‑1 (MQ=255) gATTTTTACTGGTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACatga < 1:407392/233‑1 (MQ=255) tACTGGTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAaataa > 1:138241/1‑180 (MQ=255) tGGTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAgg < 1:503108/251‑1 (MQ=255) ggTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAggg > 1:802651/1‑251 (MQ=255) ggTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAg < 1:383870/249‑1 (MQ=255) tataAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGa > 1:753670/1‑251 (MQ=255) aaCCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGTGCCAGCATGGCCAATACCAAACAGCAGGAACGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATgatgat > 1:691440/1‑211 (MQ=255) gggCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAgggg > 1:740207/1‑232 (MQ=255) cAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACgttgtt < 1:459809/251‑1 (MQ=255) tGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGc > 1:165774/1‑250 (MQ=255) ggCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGc > 1:317662/1‑210 (MQ=255) ggCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCg > 1:867393/1‑251 (MQ=255) cAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCt < 1:485499/251‑1 (MQ=255) aGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGc > 1:730346/1‑206 (MQ=255) gtgtATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGc < 1:263411/205‑1 (MQ=255) gtgtATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTAtct > 1:652997/1‑228 (MQ=255) gtATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTgg > 1:338870/1‑250 (MQ=255) catgacCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAAc < 1:823056/251‑1 (MQ=255) ccgGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGcttc < 1:656537/250‑1 (MQ=255) cAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTAtct < 1:218966/202‑1 (MQ=255) aGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTgg > 1:734684/1‑250 (MQ=255) ggTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCacgga > 1:807390/1‑251 (MQ=255) gTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGc < 1:580394/172‑1 (MQ=255) cAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACat < 1:163701/154‑1 (MQ=255) aTACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGc > 1:532596/1‑168 (MQ=255) aTACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGaaa > 1:452331/1‑196 (MQ=255) aTACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCt < 1:894907/211‑1 (MQ=255) aCCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCacggaaaacgga < 1:96599/251‑1 (MQ=255) ccAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCacggaaaacgga < 1:680348/250‑1 (MQ=255) aaaCAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCacggaaaacggaaa > 1:752572/1‑250 (MQ=255) gcagGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAaata > 1:781380/1‑96 (MQ=255) cagGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGc > 1:450509/1‑157 (MQ=255) gAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGt > 1:410653/1‑251 (MQ=255) gAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGt > 1:290947/1‑251 (MQ=255) ccGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGa < 1:574194/251‑1 (MQ=255) ccGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGa > 1:807105/1‑251 (MQ=255) cGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGc > 1:299587/1‑144 (MQ=255) aTCCGTAAACAAGGCTTGGATGCGGTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTc < 1:868269/251‑1 (MQ=255) tCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAggg > 1:218457/1‑152 (MQ=255) tAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCACACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAg > 1:574745/1‑251 (MQ=255) tAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGa > 1:759032/1‑240 (MQ=255) aaaCAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGt < 1:399133/251‑1 (MQ=255) aaCAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTc < 1:135088/251‑1 (MQ=255) ggCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTc > 1:887969/1‑246 (MQ=255) ggCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCg > 1:609665/1‑251 (MQ=255) gCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACg > 1:71373/1‑181 (MQ=255) tGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCAtt < 1:181622/251‑1 (MQ=255) tGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCAtt > 1:394343/1‑251 (MQ=255) aTTACAAAAATCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCgt < 1:834377/251‑1 (MQ=255) tCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCGTTGTTATGCGa < 1:72242/251‑1 (MQ=255) tCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCGTTGTTATGCGa < 1:128547/251‑1 (MQ=255) tCTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCGTTGTTATGCGa < 1:529767/251‑1 (MQ=255) cTGCCGACACTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCGTTGTTATGCGAt < 1:384475/251‑1 (MQ=255) acacTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCg < 1:430013/233‑1 (MQ=255) cTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCg < 1:719564/230‑1 (MQ=255) cTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCGTTGTTATGCGATTTTCTGCaa > 1:74871/1‑251 (MQ=255) cTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCGTTGTTATGCGATTTTCTGCaa > 1:500495/1‑251 (MQ=255) cTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCGTTGTTATGCGATTTTCTGCaa > 1:863413/1‑251 (MQ=255) cTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCGTTGTTATGCGATTTTCTGCaa > 1:187984/1‑251 (MQ=255) cTCCAATTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTC‑TTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCGTTGTTATGCGATTTTCTGCAAc < 1:879529/251‑1 (MQ=255) aTTACGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCGTTGTTATGCGATTTTCTGCAACATaa > 1:756346/1‑251 (MQ=255) aCGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCg < 1:715985/222‑1 (MQ=255) aCGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCGTTGTTATGCGATTTTCTGCAACATAATCa < 1:484532/251‑1 (MQ=255) aCGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCGTTGTTATGCGATTTTCTGCAACATAATCa < 1:98660/251‑1 (MQ=255) cGTTGAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCGTTGTTATGCGATTTTCTGCAACATAATCaa < 1:352162/251‑1 (MQ=255) | GCCTTGCCATCGTGAACGTAAAAGTGGCAC‑AACCAAATAATCAA‑CCGCCGTTAAATGTGGATTTTTACTGGTATAAAAACAGCAAAACCGGGCAATGGCAAGTGTATGACATGACCGCCGGCGGCGCCAGCATGGTCAATACCAAACAGCAGGAATGGAGCCCGATTATCCGTAAACAAGGCTTGGATGCGTTGACCGCAAAATTACAAAAATCTGCCGACACTCCAATTACGTTCAGTAAATAATCAATGCAAGCAACACAAAGTTTACATTGGGAATCAAACCAACATGATGATAAGATAACGCTTCGCCTGAAAGGGGAGCTATCTCGAAACACGTTGTTGCCGCTTTGGCAGCAACGTGCTTCTTTTTTATTGGCACGGAAAACGGAAACGCTTGATGTTCATTGGGATTTGTCCCAAGTCAATCGCATTGATTCCGCAGGGTTTGCGTTGTTATGCGATTTTCTGCAACATAATCAA > 1/1644115‑1644596 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |