| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,637,012 | A→G | intergenic (‑10887/‑62532) | unknown ← / → unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,637,012 | 0 | A | G | 100.0% | 285.5 / NA | 85 | intergenic (‑10887/‑62532) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (38/47); total (38/47) | |||||||||||
CCAATTAAACCAATCCGTTCGCCTGATGTTAGAAAATCAGCTCGGACAAGTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTAATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAACGTCGTGATCCGAGTCTGAAAGTCATTATTTATCCCACAGC > 1/1636771‑1637256 | ccAATTAAACCAATCCGTTCGCCTGATGTTAGAAAATCAGCTCGGACAAGTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAAc < 1:484820/251‑1 (MQ=255)ccAATTAAACCAATCCGTTCGCCTGATGTTAGAAAATCAGCTCGGACAAGTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAAc < 1:38159/251‑1 (MQ=255) aaTTAAACCAATCCGTTCGCCTGATGTTAGAAAATCAGCTCGGACAAGTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATc > 1:709329/1‑246 (MQ=255) aaaCCAATCCGTTCGCCTGATGTTAGAAAATCAGCTCGGACAAGTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTa > 1:443365/1‑251 (MQ=255) aaaCCAATCCGTTCGCCTGATGTTAGAAAATCAGCTCGGACAAGTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTa > 1:616063/1‑251 (MQ=255) tCGCCTGATGTTAGAAAATCAGCTCGGACAAGTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGc < 1:823973/251‑1 (MQ=255) cGCCTGATGTTAGAAAATCAGCTCGGACAAGTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCa > 1:538419/1‑251 (MQ=255) tAGAAAATCAGCTCGGACAAGTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGa < 1:665050/232‑1 (MQ=255) aaaTCAGCTCGGACAAGTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAg > 1:13595/1‑251 (MQ=255) aTCAGCTCGGACAAGTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAggg < 1:166253/251‑1 (MQ=255) aTCAGCTCGGACAAGTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAggg < 1:358758/251‑1 (MQ=255) cGGACAAGTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGa < 1:729063/251‑1 (MQ=255) cGGACAAGTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGa < 1:855769/251‑1 (MQ=255) cGGACAAGTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGa < 1:595167/251‑1 (MQ=255) aGTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATgcag > 1:381960/1‑250 (MQ=255) gTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAg < 1:41840/215‑1 (MQ=255) gTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATgcagca > 1:809316/1‑251 (MQ=255) cTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAGAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGa > 1:216199/1‑251 (MQ=255) cTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGTGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGa < 1:424298/251‑1 (MQ=255) gggAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAg > 1:796164/1‑202 (MQ=255) atatCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGcc > 1:348294/1‑210 (MQ=255) atatCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGaaa > 1:606647/1‑249 (MQ=255) atCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAAc > 1:518953/1‑182 (MQ=255) aaCTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGa < 1:546662/181‑1 (MQ=255) ttCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGAt < 1:351119/204‑1 (MQ=255) gggCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGa < 1:408370/212‑1 (MQ=255) gCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCt > 1:346542/1‑250 (MQ=255) gTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCTGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAAt > 1:252618/1‑250 (MQ=255) gTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATgcagc < 1:101084/197‑1 (MQ=255) gTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAAt > 1:538617/1‑250 (MQ=255) aCGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCAcc < 1:201067/147‑1 (MQ=255) cccAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCA‑CTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGt > 1:874450/1‑250 (MQ=255) cAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCa > 1:92395/1‑251 (MQ=255) gcgcCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCa > 1:19530/1‑208 (MQ=255) gcgcCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAgg > 1:628276/1‑250 (MQ=255) gcgcCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAgg > 1:651649/1‑250 (MQ=255) ccATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCatt < 1:374987/251‑1 (MQ=255) aTGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCattat > 1:200736/1‑251 (MQ=255) gTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCAttatta > 1:102765/1‑251 (MQ=255) ttCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCATCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCAttatta < 1:569574/250‑1 (MQ=255) ttCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCAttatta < 1:108381/250‑1 (MQ=255) ttCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTAc < 1:22071/251‑1 (MQ=255) aaaaaTCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATc < 1:233641/91‑1 (MQ=255) aaaaaTCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAAc < 1:872905/251‑1 (MQ=255) aaaTCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCg < 1:266192/251‑1 (MQ=255) gcgcGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTg > 1:239777/1‑175 (MQ=255) cgTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTA‑TACCTCTAAAACCGGGGCGGCAt < 1:663048/250‑1 (MQ=255) ttCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGat < 1:720239/251‑1 (MQ=255) ttCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGat < 1:527878/251‑1 (MQ=255) gtcTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAAc < 1:236411/68‑1 (MQ=255) gtcTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGggc < 1:592661/231‑1 (MQ=255) cATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTAc < 1:729276/251‑1 (MQ=255) cATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTAc < 1:21226/251‑1 (MQ=255) cAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAAcg > 1:486284/1‑251 (MQ=255) cAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAAc < 1:730368/250‑1 (MQ=255) aGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCAttatta < 1:633873/201‑1 (MQ=255) ggTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGc > 1:563050/1‑193 (MQ=255) ggTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGatat > 1:470510/1‑231 (MQ=255) ggTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAAcgt > 1:858525/1‑250 (MQ=255) ggTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAAcgt > 1:844981/1‑250 (MQ=255) ggTATTGGTGCGTGCTAGTGTCAGTTGGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCatt < 1:443250/196‑1 (MQ=255) gTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAAcgtcg > 1:202318/1‑251 (MQ=255) gTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAAcgt < 1:850751/249‑1 (MQ=255) ggTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATc > 1:223935/1‑44 (MQ=255) gtgcgtgcTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCatta > 1:729521/1‑190 (MQ=255) gtgcgtgcTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAACGTCGTGATc < 1:8968/250‑1 (MQ=255) gtgcgtgcTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAACGTCGTGATc < 1:602587/250‑1 (MQ=255) gtgcTAGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAACGTCGTGATCCGAGt > 1:402083/1‑251 (MQ=255) aGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCatt < 1:155394/180‑1 (MQ=255) aGTGTCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAAc > 1:841483/1‑194 (MQ=255) gtgtCAGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCCACCGCACTTTAGTCAAGCGGTAGGCATTATTACct < 1:221438/186‑1 (MQ=255) aGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAACGTCGTGATCCGAGTCTGAAAGTCat > 1:378016/1‑251 (MQ=255) aGTTTGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAACGTCGTGATCCGAGTCTGAAAGTCat > 1:126643/1‑251 (MQ=255) tGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAACGTCGTGATCCGAGTCTGAAAg < 1:803382/243‑1 (MQ=255) tGTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAACGTCGTGATCCGAGTCTGAAAGTCattatt > 1:660023/1‑251 (MQ=255) gTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGa < 1:39144/112‑1 (MQ=255) gTATGAGCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAACGTCGTGATCCGAGTCTGAAAGTCAttattt > 1:306896/1‑251 (MQ=255) gCCGCGCGGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCt < 1:9727/135‑1 (MQ=255) gcgcgGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTCAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAACGTCGTGATCCGAGTCTGAAAGTCATTATTTATCCCACAg > 1:451072/1‑251 (MQ=255) cgcgGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAACGTCGTGATCCGAGTCTGAAAGTCATTATTTATCCCACAGc < 1:733935/251‑1 (MQ=255) cgcgGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAACGTCGTGATCCGAGTCTGAAAGTCATTATTTATCCCACAGc < 1:307281/251‑1 (MQ=255) cgcgGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAACGTCGTGATCCGAGTCTGAAAGTCATTATTTATCCCACAGc < 1:78800/251‑1 (MQ=255) cgcgGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAACGTCGTGATCCGAGTCTGAAAGTCATTATTTATCCCACAGc < 1:362143/251‑1 (MQ=255) cgcgGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAACGTCGTGATCCGAGTCTGAAAGTCATTATTTATCCCACAGc < 1:593317/251‑1 (MQ=255) cgcgGTGATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAACGTCGTGATCCGAGTCTGAAAGTCATTATTTATCCCACAGc < 1:607868/251‑1 (MQ=255) | CCAATTAAACCAATCCGTTCGCCTGATGTTAGAAAATCAGCTCGGACAAGTTTGGCTCACCGGGGAAATATCTAACTTTACCCAACCAGTTTCGGGGCATTGGTATTTAAGTTTAAAAGACGAAAACGCCCAAGTGCGCTGCGCCATGTTCCGCATGAAAAATCTGCGCGTGGGTTTTCGTCCGTCTAATGGCATGCAGGTATTGGTGCGTGCTAGTGTCAGTTTGTATGAGCCGCGCGGTAATTATCAACTGATTATCGAAAGTATGCACCTTGCCGGCGAAGGGTTACTGATGCAGCAATTTGAAGCGCTGAAACTCAAATTAGCGGCAGAAGGATTGTTCGCTCAAAATCACAAGAAAAACCTACCGCACTTTAGTCAAGCGGTAGGCATTATTACCTCTAAAACCGGGGCGGCATTGCAGGATATTTTGCATATTCTACAACGTCGTGATCCGAGTCTGAAAGTCATTATTTATCCCACAGC > 1/1636771‑1637256 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |