| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,587,719 | G→A | intergenic (+255197/+14081) | unknown → / ← unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,587,719 | 0 | G | A | 98.6% | 197.4 / NA | 69 | intergenic (+255197/+14081) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (31/37); minor base C (1/0); total (32/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAAGCGACACCACCATGCGCGGACGTGACGAATGGGTGCGCGTGTCTTGGGATGAAGCGCTGGATTTGGTGCACGAACAATTAAAACGCGTGCGTGATGAACACGGCCCGACAGGCATTTTCGCCGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCGGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTCAAAAAATT‑CCAAGCCACCGGCAAACGCATTATTTGTATCGATCCGCAAAAAAGTGAAACCTGCCAGAT > 1/1587483‑1587963 | aaaGCGACACCACCATGCGCGGACGTGACGAATGGGTGCGCGTGTCTTGGGATGAAGCGCTGGATTTGGTGCACGAACAATTAAAACGCGTGCGTGATGAACACGGCCCGACAGGCATTTCCGCCGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTg < 1:890793/251‑1 (MQ=255) acacCACCATGCGCGGACGTGACGAATGGGTGCGCGTGTCTTGGGATGAAGCGCTGGATTTGGTGCACGAACAATTAAAACGCGTGCGTGATGAACACGGCCCGACAGGCATTTTCGCCGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACCCCACTGGTGGGTTTTTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATg > 1:342977/1‑251 (MQ=255) gACGTGACGAATGGGTGCGCGTGTCTTGGGATGAAGCGCTGGATTTGGTGCACGAACAATTAAAACGCGTGCGTGATGAACACGGCCCGACAGGCATTTTCGCCGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACcagcg < 1:878930/219‑1 (MQ=255) cGTGACGAATGGGTGCGCGTGTCTTGGGATGAAGCGCTGGATTTGGTGCACGAACAATTAAAACGCGTGCGTGATGAACACGGCCCGACAGGCATTTTCGCCGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGc < 1:70309/249‑1 (MQ=255) cGTGACGAATGGGTGCGCGTGTCTTGGGATGAAGCGCTGGATTTGGTGCACGAACAATTAAAACGCGTGCGTGATGAACACGGCCCGACAGGCATTTTCGCCGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCAc < 1:127438/251‑1 (MQ=255) cGTGACGAATGGGTGCGCGTGTCTTGGGATGAAGCGCTGGATTTGGTGCACGAACAATTAAAACGCGTGCGTGATGAACACGGCCCGACAGGCATTTTCACCGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCAc < 1:94072/251‑1 (MQ=255) gggTGCGCGTGTCTTGGGATGAAGCGCTGGATTTGGTGCACGAACAATTAAAACGCGTGCGTGATGAACACGGCCCGACAGGCATTTTCGCCGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTg < 1:476891/218‑1 (MQ=255) cgTGTCTTGGGATGAAGCGCTGGATTTGGTGCACGAACAATTAAAACGCGTGCGTGATGAACACGGCCCGACAGGCATTTTCGCCGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAg < 1:758616/250‑1 (MQ=255) cgTGTCTTGGGATGAAGCGCTGGATTTGGTGCACGAACAATTAAAACGCGTGCGTGATGAACACGGCCCGACAGGCATTTTCGCCGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAg < 1:58202/250‑1 (MQ=255) tgtCTTGGGATGAAGCGCTGGATTTGGTGCACGAACAATTAAAACGCGTGCGTGATGAACACGGCCCGACAGGCATTTTCGCCGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGca < 1:720561/250‑1 (MQ=255) ggATGAAGCGCTGGATTTGGTGCACGAACAATTAAAACGCGTGCGTGATGAACACGGCCCGACAGGCATTTTCGCCGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAAcc < 1:508589/250‑1 (MQ=255) cgcTGGATTTGGTGCACGAACAATTAAAACGCGTGCGTGATGAACACGGCCCGACAGGCATTTTCGCCGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGaa < 1:240984/251‑1 (MQ=255) cTGGATTTGGTGCACGAACAATTAAAACGCGTGCGTGATGAACACGGCCCGACAGGCATTTTCGCCGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATc < 1:891453/251‑1 (MQ=255) cgtgcgtgATGAACACGGCCCGACAGGCATTTTCGCCGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTAc < 1:177067/251‑1 (MQ=255) tgatgaACACGGCCCGACAGGCATTTTCGCCGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCGCCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTgg < 1:127204/250‑1 (MQ=255) cGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTg < 1:505048/251‑1 (MQ=255) tGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGGCATAAAAGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAATGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGGCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCa > 1:755995/1‑250 (MQ=255) gTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTTTCGGGCATAAAAGAGACTACTCCACCCGCGCGGCGCCAGTGATTATGCCGCACGGGCTTGGCACCATCGGAGGGGATGAGCAACAAACCAGTTGGGGAACCGTGCTGGAACACAGCGATATTATCGGAATTTGGTCGGCAAACCCGCCCACCACCATGCGGATTTCGTGGATGTCCAcc > 1:800548/1‑250 (MQ=255) gTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGt < 1:675919/239‑1 (MQ=255) tAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGCCTACTCCCCCAGCGCGGCGCAAATGATTATGCCGCACGTGCTTGGCACCATCCAAGTGTATGTGCCACAAACCAGTTGGGAATCCGGGCTGGAACACAGCGATATTATCGTACTTTGGGCGGCAAACCCGCTCACCCCCATGCGGATTGCGTGGATGTCCACCGAt > 1:81601/1‑250 (MQ=255) tAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCCAGTGATTATGCCGCACGTGCTTTGCACCATCGAAGGGTATGAGCAACAAACCAGTTGGGGATCCCTGCTGGAACACAGCGATATTATCGTACTTTTGTCGGCAAAACCCCTCACCACCATGCGTATTTCGTGGATGTCCACCGAt > 1:862793/1‑250 (MQ=255) tgGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAacac < 1:346441/250‑1 (MQ=255) cATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTTTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGGGATTATTCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAAACAGGTGGGAATCCGTGCTGGAACACAACGATATTATCGTACTTTGGTCGGCAAACCCGCCCAACACCATGCGGATTTCGTGGATGTCCACCGATCAACACGGCAtt > 1:772183/1‑251 (MQ=255) ttACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAAGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGGATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTTGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCCCCGATCAACACGGCATTGa > 1:622260/1‑251 (MQ=255) ttACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAAGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGGGGATGAGCAAAAAACCAGGTGGGAATCCCTGCTGGAAAACAGCGATATTATCGTACTTTTGTCGGCAAAACCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGa > 1:28408/1‑251 (MQ=255) acacGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTTGTCGGCAAACCCCCTCACCACCATGCg > 1:631732/1‑213 (MQ=255) acacGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACt < 1:27466/251‑1 (MQ=255) acacGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACt < 1:586980/251‑1 (MQ=255) cTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTggg < 1:790010/144‑1 (MQ=255) ccTTATTACAACGTTATATGAACGCCACTGGCGGTTTTTTCGGACATAAAAGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGGTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGGATTGCGTGGATGTCCCCCGATCAACACCGCAt > 1:297529/1‑232 (MQ=255) ccTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAAcc < 1:165223/128‑1 (MQ=255) ccTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTg < 1:225523/204‑1 (MQ=255) ccTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAAGCGACTACTCCACCAGCGCGGCGCCAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGGATGAGCAAAAAAACAGTTGGGGATCCGTGCTGGaaa > 1:251591/1‑149 (MQ=255) ccTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAAGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTTGTCGGCAAACCCGCTcaccac > 1:636602/1‑193 (MQ=255) ccTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAAGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTCAAAAAAtt > 1:66128/1‑250 (MQ=255) ccTTATTACAACGTTATATGAACGCCACTGGCGGATTTGGCGGACATAAAGGGGACTAATCCACCAGTCCGGTGTAAGTGATTATGCCGCACCGGCTTGGCACCCACCCAGTGTTAGTGCAAAAAACCAGTTGGGGATTCTTGCTGGAAAACAGCGATATTTTCGTACTTTTGTTGGGCAACACGCTTACCACCACCCGAATTGCGTGGATGGCTACAGAACAACTCGGCCTTGACTATTTCTAAAAAttt > 1:517404/1‑250 (MQ=255) ttattaCAACGTTATATGAACGCCACTGGCGGTTTTTTCGGACATAAAAGCGACTACTCCACCAGCGCGGCGCCAGTGATTATGCCGCACGTGCTTTGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCCCCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTCAAAAAATT‑CCa > 1:263592/1‑251 (MQ=255) ttattaCAACGTTATATGAACGCCACTGGCGGTTTTTTCGGACATAAAAGCGACTACTCCACCAGCGCGGCGCAAGGGATTATGCCGCACGTGCTTGGCACCATCGAAGGGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTTACTATTTCAAAAAATT‑CCa > 1:474607/1‑251 (MQ=255) ttattaCAACGTTATATGAACGCCACTGGCGGTTTTGTTGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGGGATTATTCCCGACGTGCTTGGCACCATCGAAATGTATGAGCAACAAACCAGTTGGGGATCCGTGCTGGAACACAGCGATATTATCGGACTTTGGGCGGCCAACCCGCTCACCACCCTGCGTATTGCGTGGATGTCCACCCATCAACACGGCATTGACTATTTCAAAAAATT‑CCa > 1:756087/1‑251 (MQ=255) tattaCAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAac < 1:372528/147‑1 (MQ=255) tattaCAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAAGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAacac > 1:391741/1‑149 (MQ=255) attaCAACGTTATATGAACGCCACTGGCGGTTTTTTCGGACATAAAAGGGCCTACCCCACCAACGCCGCGCAAGAGATTATGCCCCACCGGCTTGGCACCCTCGAAGGGTATGAGCAACAAACCAGGTGGGAATCCGTGCTGGAACACAGCGATATTTTCGTACTTTTGTCGGCAAACCCCCTc > 1:267020/1‑184 (MQ=255) attaCAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAacac < 1:3847/223‑1 (MQ=255) ttaCAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAAGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCCTGGCCCCATCGCAATGGATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTTGGCGGCAAACCCCCCCACCACCAAGCGTATTTCGTGGGAGTTCACCGCTCAACACGGCATTGACTATTTCaaaaaaattcaag > 1:230341/1‑243 (MQ=255) aCGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGc < 1:311561/188‑1 (MQ=255) aCGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTg < 1:174431/194‑1 (MQ=255) aCGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGa < 1:14056/200‑1 (MQ=255) aCGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAAGCGACTACTCCACCAGCGCGGCGCAAGGGATTATGCCGCCCGGGCTTGGCACCCTCGAAGTGGATGAGCAACAAAACAGGTGGGAATCCGTGCTGGAACACAGCGatat > 1:855103/1‑150 (MQ=255) cGTTATATGAACGCCACTGGCGGTTTTGTCGGGCATAAAAGCGACTACTCCCCCAGCGCGGCGCAAGTGATTATGCCGCCCGCGCTTTGCACCATCCAAGTGGTTGAGCAACAAACCAATTGGGAAACCCCGCTGGAACACAACGCTATTATCGTACCTTGGTCGGCAACCCCCCCCACCACCATGCGGATTTCGTGGATGTCCACCGATCAACACCGCCTTGACTATTTCAAAAAATTCCCAAGCCCCCg > 1:439367/1‑251 (MQ=255) gTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATc < 1:396098/210‑1 (MQ=255) gTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAAGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGGGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCCCACCACCATGCGTATTGCGGGGATGTCCACCGATCAACACGGCATTGACTATTTCAAAAAATT‑CCAAGCCACCgg > 1:236013/1‑250 (MQ=255) atatGAACGCCACTGGCGGTTTTGTCGGACATAAAAGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTTGCACCATCGAAGTGTATGAGCAACAAAACAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTTGTCGGCCAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTCAAAAAATT‑CCAAGCCACCGGCaaa > 1:157736/1‑251 (MQ=255) atGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTTAAAAAATT‑CCAAACCACCGGCAAAc > 1:621117/1‑250 (MQ=255) gAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAac < 1:127893/206‑1 (MQ=255) ccACTGGCGGTTTTGTCGGACATAAAGGGGACTACTCCACCAGCGCGGCGCAAGTGGTTATTCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACCAACCAGTTGGGAATCCCTGCCGGAACAAAGCGATATTATCGTACTTTGGTCGGCAAAACCGCTCACCACCATTCGGATTGCGTGGATGCCCACCGATCAACACGGCATTGACTATTTCAAAAAATT‑TCAAGCCACCGGCCAACGGattatt > 1:834267/1‑251 (MQ=255) ccACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGt < 1:806857/176‑1 (MQ=255) ccACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTCGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTc < 1:10623/218‑1 (MQ=255) ggCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTCAAAAAATT‑CCAAGCCACCGGCAAACGCATTATTTGTAt > 1:67009/1‑251 (MQ=255) gCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGGCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCGCCGATCAACACGGCATTGACTATTTCAAAAAATT‑CCAAGCCACCGGCAAACGCATTATTTGTAt < 1:201425/250‑1 (MQ=255) gCGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTCAAAAAATT‑CCAAGCCACCGGCAAACGCATTATTTGTAt < 1:771780/250‑1 (MQ=255) cGGTTTTGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTCAAAAAATT‑CCAAGCCACCGGCAAACGCATTATTTGTATc < 1:697689/250‑1 (MQ=255) ttttGTCGGACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTCAAAAAATT‑CCAAGCCACCGGCAAACGCATTATTTGTATCGATc < 1:584694/251‑1 (MQ=255) gACATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCCGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTg > 1:288828/1‑162 (MQ=255) aCATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATc < 1:341310/96‑1 (MQ=255) aCATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTCAAAAAATT‑CCAAGCCACCGGCAAACGCATTATTTGTATCGATCCGCaaaaaa > 1:689471/1‑251 (MQ=255) aCATAAAGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTCAAAAAATT‑CCAAGCCACCGGCAAACGCATTATTTGTATCGATCCGCaaaaaa > 1:812332/1‑251 (MQ=255) aaaGGCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTCAAAAAATT‑CCAAGCCACCGGCAAACGCATTATTTGTATCGATCCGCAAAAAAGTGa > 1:758207/1‑251 (MQ=255) ggCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTCAAAAAATT‑CCAAGCCACCGTCAAACGCATTATTTGTATCGATCCGCAAAAAAGTGaaa > 1:12110/1‑250 (MQ=255) gCGACTACTCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTCAAAAAATT‑CCAAGCCACCGGCAAACGCATTATTTGTATCGATCCGCAAAAAAGTGaaa < 1:472413/249‑1 (MQ=255) ctactCCACCAGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTCAAAAAATT‑CCAAGCCACCGGCAAACGCATTATTTGTATCGATc < 1:689765/230‑1 (MQ=255) ccaccaGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTCAAAAAATT‑CCAAGCCACCGGCAAACGCATTATTTGTATCGATCCGCAAAAAAGTGAAACCTGCCAGAt > 1:603268/1‑250 (MQ=255) | AAAGCGACACCACCATGCGCGGACGTGACGAATGGGTGCGCGTGTCTTGGGATGAAGCGCTGGATTTGGTGCACGAACAATTAAAACGCGTGCGTGATGAACACGGCCCGACAGGCATTTTCGCCGGTTCTTACGGCTGGTTTAGCTGTGGCGCATTACACGCTTCCCGCACCTTATTACAACGTTATATGAACGCCACTGGCGGTTTTGTCGGACATAAAGGCGACTACTCCACCGGCGCGGCGCAAGTGATTATGCCGCACGTGCTTGGCACCATCGAAGTGTATGAGCAACAAACCAGTTGGGAATCCGTGCTGGAACACAGCGATATTATCGTACTTTGGTCGGCAAACCCGCTCACCACCATGCGTATTGCGTGGATGTCCACCGATCAACACGGCATTGACTATTTCAAAAAATT‑CCAAGCCACCGGCAAACGCATTATTTGTATCGATCCGCAAAAAAGTGAAACCTGCCAGAT > 1/1587483‑1587963 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |