| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,558,877 | C→T | intergenic (+226355/+42923) | unknown → / ← unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,558,877 | 0 | C | T | 100.0% | 250.2 / NA | 74 | intergenic (+226355/+42923) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (38/36); total (38/36) | |||||||||||
CACCGTTGATGCAAACGGAAGACGGTCAAGTGGAAGAATCCTATTCCATTTCGGCGGGCTTGGATTTCCCTTCCGTGGGGCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAACCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGACCGTTCTTTTGACATTATTTGCACCCTGGTGGATAACGAGGCGGACGCATTGGAA > 1/1558632‑1559121 | cACCGTTGATGCAAACGGAAGGCGGTCAAGTGGAAGAATCCTATTCCATTTCGGCGGGCTTGGATTTCCCTTCCGTGGGGCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAAt < 1:250467/251‑1 (MQ=255) ttGATGCAAACGGAAGACGGTCAAGTGGAAGAATCCTATTCCATTTCGGCGGGCTTGGATTTCCCTTCCGTGGGGCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAg < 1:672376/250‑1 (MQ=255) tGCAAACGGAAGACGGTCAAGTGGAAGAATCCTATTCCATTTCGGCGGGCTTGGATTTCCCTTCCGTGGGGCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCaa > 1:709582/1‑251 (MQ=255) aCGGAAGACGGTCAAGTGGAAGAATCCTATTCCATTTCGGCGGGCTTGGATTTCCCTTCCGTGGGGCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAAtttt > 1:74882/1‑251 (MQ=255) gTCAAGTGGAAGAATCCTATTCCATTTCGGCGGGCTTGGATTTCCCTTCCGTGGGGCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAAt > 1:747747/1‑251 (MQ=255) tGGAAGAATCCTATTCCATTTCGGCGGGCTTGGATTTCCCTTCCGTGGGGCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTc < 1:355731/250‑1 (MQ=255) ggAAGAATCCTATTCCATTTCGGCGGGCTTGGATTTCCCTTCCGTGGGGCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCg > 1:662946/1‑251 (MQ=255) aagaaTCCTATTCCATTTCGGCGGGCTTGGATTTCCCTTCCGTGGGGCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCgg < 1:877067/250‑1 (MQ=255) aTCCTATTCCATTTCGGCGGGCTTGGATTTCCCTTCCGTGGGGCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTcgcg > 1:542406/1‑251 (MQ=255) tttCGGCGGGCTTGGATTTCCCTTCCGTGGGGCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGat < 1:358647/251‑1 (MQ=255) cggGCTTGGATTTCCCTTCCGTGGGGCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATAtttt < 1:437959/250‑1 (MQ=255) cggGCTTGGATTTCCCTTCCGTGGGGCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTc < 1:498587/251‑1 (MQ=255) gggCTTGGATTTCCCTTCCGTGGGGCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCa > 1:563980/1‑251 (MQ=255) tCCCTTCCGTGGGGCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATaaa > 1:174549/1‑251 (MQ=255) ccGTGGGGCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCAc > 1:51368/1‑235 (MQ=255) gCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAg > 1:90758/1‑176 (MQ=255) ccTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTaa > 1:807314/1‑251 (MQ=255) tATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGaa < 1:185203/244‑1 (MQ=255) aTTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATaa > 1:807197/1‑160 (MQ=255) gCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTc > 1:192552/1‑203 (MQ=255) gTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATg < 1:200673/235‑1 (MQ=255) gAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACAttt > 1:166752/1‑251 (MQ=255) gAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTGAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACAtt < 1:84583/250‑1 (MQ=255) aCCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGcc > 1:590443/1‑250 (MQ=255) cccAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGTAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAAt > 1:19542/1‑221 (MQ=255) cccAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGat > 1:630773/1‑178 (MQ=255) cccAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCa > 1:157412/1‑251 (MQ=255) cccAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCa > 1:400469/1‑251 (MQ=255) aaGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAAtt > 1:644154/1‑251 (MQ=255) tATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTa < 1:496289/249‑1 (MQ=255) tATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTa < 1:721655/249‑1 (MQ=255) aaTGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAAt > 1:95348/1‑251 (MQ=255) aTGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATg < 1:646718/251‑1 (MQ=255) aTGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATg < 1:438721/251‑1 (MQ=255) gCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAgg > 1:333670/1‑250 (MQ=255) cccTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTtggtgg < 1:11500/126‑1 (MQ=255) cccTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGat < 1:107533/155‑1 (MQ=255) cccTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGccc < 1:438816/227‑1 (MQ=255) cccTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCACGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGgcg > 1:597772/1‑251 (MQ=255) gACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCAtt > 1:206179/1‑250 (MQ=255) cgTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTc < 1:551670/251‑1 (MQ=255) gTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATg < 1:713163/235‑1 (MQ=255) ttCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGat > 1:716726/1‑144 (MQ=255) ttCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTc < 1:698879/150‑1 (MQ=255) ttCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTc > 1:629357/1‑249 (MQ=255) ttCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTc > 1:62997/1‑249 (MQ=255) cATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTg < 1:267400/250‑1 (MQ=255) acacGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGa > 1:106420/1‑251 (MQ=255) ggCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCa < 1:387562/165‑1 (MQ=255) cATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTa > 1:880352/1‑195 (MQ=255) ttattCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGc > 1:210220/1‑238 (MQ=255) attCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAACTTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGAc < 1:304881/251‑1 (MQ=255) attCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGc < 1:716379/236‑1 (MQ=255) attCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGAc < 1:669818/251‑1 (MQ=255) attCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGAc < 1:105568/251‑1 (MQ=255) cGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAgg > 1:107274/1‑201 (MQ=255) tCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTc < 1:688384/102‑1 (MQ=255) cccACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCa > 1:765699/1‑140 (MQ=255) cGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGACCGTTCTTTTGACATTATTTGCAc < 1:746605/251‑1 (MQ=255) cccTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGACCGTTCTTTTGACATTATTTGCAcc < 1:567646/250‑1 (MQ=255) cccTCGCCCAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGACCGTTCTTTTGACATTATTTGCAcc > 1:135314/1‑250 (MQ=255) cccAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGACCGTTCTTTTGACATTATTTGCACCCtggtgg < 1:335894/251‑1 (MQ=255) cAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGACCGTTCTTTTGACATTATTTGCACCCTGGTGGAt < 1:354283/251‑1 (MQ=255) cAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGACCGTTCTTTTGACATTATTTGCACCCTGGTGGAt < 1:551445/251‑1 (MQ=255) cAAGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAAGGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGACCGTTCTTTTGACATTATTTGCACCCTGGTGGAt < 1:698716/251‑1 (MQ=255) acggCCTTTAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGACCGTTCTTTTGACATTATTTGCACCCTGGTGGAt < 1:269598/248‑1 (MQ=255) aGCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGACCGTTCTTTTGACATTATTTGCACCCTGGTGGAt < 1:678425/249‑1 (MQ=255) gCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTc > 1:349588/1‑183 (MQ=255) gCCTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGACCGTTCTTTTGACATTATTTGCACCCTGGTGGATaa > 1:471166/1‑250 (MQ=255) ccTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGACCGTTCTTTTGACATTATTTGCACCCTGGTGGATAACg > 1:766609/1‑251 (MQ=255) cTTAAAAATGATCCGTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGACCGTTCTTTTGACATTATTTGCACCCTGGTGGATAACGa < 1:218074/251‑1 (MQ=255) gTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGACCGTTCTTTTGACATTATTTGCACCCTGGTGGATaa > 1:770563/1‑234 (MQ=255) gTCAGGAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGACCGTTCTTTTGACATTATTTGCACCCTGGTGGATAACGAGGCGGACGCATTgg > 1:350181/1‑251 (MQ=255) ggAATCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGACCGTTCTTTTGACATTATTTGCACCCTGGTGGATAACGAGGCGGACGCATTGGaa > 1:692324/1‑249 (MQ=255) | CACCGTTGATGCAAACGGAAGACGGTCAAGTGGAAGAATCCTATTCCATTTCGGCGGGCTTGGATTTCCCTTCCGTGGGGCCGCAACACGCCTATTTACAAAGCATCGGTCGTGCGGAATACCCAAGTATTACCGATAATGAAGCCCTTGACGCGTTCCAAGCATTGGCAAAACACGAAGGCATTATTCCTGCGTTAGAAAGCTCCCACGCCCTCGCCCAAGCCTTAAAAATGATCCGTCAGGAACCAAATAAAGCGCAAATTTTGGTGGTGAATTTGTCCGGTCGCGGCGATAAAGATATTTTCACCGTAGATAAAATTTTAAATGAAAAAGGAATGTAATCATGAGCCGTTTTGAAACCACATTTGCCCAATTACACGCGCAAAATGAAGGCGCATTCGTTCCTTTCGTGACCTTATGCGACCCGACTTTCGACCGTTCTTTTGACATTATTTGCACCCTGGTGGATAACGAGGCGGACGCATTGGAA > 1/1558632‑1559121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |