| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,536,383 | A→G | intergenic (+203861/+65417) | unknown → / ← unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,536,383 | 0 | A | G | 96.2% | 249.3 / 0.1 | 78 | intergenic (+203861/+65417) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (37/38); minor base . (3/0); total (40/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTGCCAACCGTTACCGGCGGCACGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTGCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGACGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGGAAGAAAACGCCCTCGGGCAACTTAAACAAAGATTAGACGGCACTTTCGCCGACGTCGTAAATTTGATTCTGAACTGCAAA > 1/1536143‑1536627 | ctgcCAACCGTTACCGGCGGCACGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTGCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGtat < 1:628741/251‑1 (MQ=255) cAACCGTTACCGGCGGCACGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTGCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGcc < 1:300165/251‑1 (MQ=255) aaCCGTTACCGGCGGCACGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTGCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCt < 1:113698/251‑1 (MQ=255) aaCCGTTACCGGCGGCACGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTGCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCt < 1:705506/251‑1 (MQ=255) aCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTGCTCTCTTCTGCACTTTTCGTAGGCTCTCCCCCCCCCGACGGTATCCGGCCCCCTGCCCTGTGTAGCCCCGACTTTCCTCCCGCC‑CACTTT‑TCCCCCCGTTTACGCCTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CCGGCGCGCAGTATAGCCCAAAATCTTTGCggaaa > 1:712381/1‑247 (MQ=255) cGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTGCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCt < 1:22420/234‑1 (MQ=255) gcgcTCTTACCGCACCCTTTCACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTTCTCTCTTCTTCACTTTTCGTATGCTCTCTCCCCCCGGACGTTTTTCCGCACTCCGCCCTGTGTAGCCCCGACCTTTCTCCCGCCTTCCTTT‑TCCCCC‑GTTTACGCTTGCGCGAC‑GTT‑ATGGGGTTCAATAGACCCGCGCTTTCCTGA‑CC‑AACT‑CAGGCGCGCAGGATAGCCTAAATTTTTTGCGGAAtatatt > 1:870885/1‑249 (MQ=255) ctctTACCGCACCCTTTCACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTGCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAgtgt < 1:840639/250‑1 (MQ=255) ctctTACCGCACCCTTTCACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTGCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAgtgt < 1:627920/250‑1 (MQ=255) ctctTACCGCACCCTTTCACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTGCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAgtgt < 1:562452/250‑1 (MQ=255) cccTTTCACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTTCTCTCTTCTTCACTTTTCCTAGGCTCTCGCCCCCCCGACGTTATTCCGCCCTCTGCCCCTTTTAACCCCGGCTTTCCTCCCCCC‑TACTTGTTCCCCCGGTTT‑CGCCTTCGCGAC‑GTT‑TGGGGCCTCAATAGAACCGCCATTGCCTGA‑CC‑AACTCCAG‑CGCGCAGGATAGCCTAAAATCTTTGCGAAAAATAGGGTTAAGGAAAAAGt > 1:880198/1‑251 (MQ=255) cccTTTCACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTGCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAgtgt < 1:517392/239‑1 (MQ=255) cTTTCACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTTCTCTCTGCTTCACTTGTCGTAGGCTCCCCCCCCCCGGACGTTATCCCGCCCTCTGCCCTGTGTAGCCCCGACTTTCCTCCCCCC‑TACTTT‑TCCCCCCGCTTACGCCTGCGCGAC‑GGT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CCAAACC‑CAG‑CGGGCAGTATAGACTAAATTTTTGGCGGAATATAGAGTTAAGTAAAAAATTa > 1:34460/1‑251 (MQ=255) cTTTCACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTTCTCTCTGCTGCACTTTTCGTAGGCTCTCGCCCCCCCGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCCCC‑TACCTT‑TCCCCCGGGTTACGCTTGCGCGGC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTACATTCTTTGCGAAATATAGTGTTAAGTAAAAAgata > 1:494113/1‑248 (MQ=255) cACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTTCTCTCTTCTGCCCTTTTTGTAGGCTCTCCCCCCCCCGACGTTTTCCGGCACTCTTCCCTGTGTAGCCCCGACTTTCCCCCCCCC‑CACTTT‑TCCCCCCGCTTACGCTTTCGCGAC‑CTT‑TGGGGCTTCAATAAACCCGCGATTTCCCGA‑CC‑CACT‑CCCGCGCGCCGTATAGCCCAAATTc > 1:829447/1‑216 (MQ=255) cACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTGCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCt < 1:745270/251‑1 (MQ=255) cccTTACCTGATCTCTTGCGAGCCATCGGCGGTTTGCTCTTTGCTGCACTTTTTTTTAGCCCTCGCCCCCCCGACGGTATTCCGCACCCTGCCCTGTGTAGCCCGGGCCTTTCTCCCCCC‑TACTTT‑TCCCCCCGGTTATGCCTTCGCGAC‑GGT‑AGGGGGTTCAATAGAACGGCGAATGCCTGA‑CC‑AACT‑CATGCGCGCAGtat > 1:295932/1‑203 (MQ=255) ttACCTGATCTCTTGCGAGCCATCGGCGGTTTGCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAAt < 1:731321/251‑1 (MQ=255) tACCTGATCTCTTGCGAGCCATCGGCGGTTTGCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCt < 1:415761/204‑1 (MQ=255) ccTGATCTCTTGCGAGCCATCGGCGGTTTGCTCTCTGCTGCACTTGTCGTAGGCTCTCCCCCCCCCGACGTTATTCGGCACTCTGCCCTGTGTAGCCCCGACTTTCCTCCCCCC‑CACTTG‑TCCCCCCGTTTACGCTTGCGCGGCGGTT‑GGGGGC‑TCAATAGACCCGCGATTGCCCGA‑CC‑CACT‑CAAGCGCGCAGGATAGCCTAAATTCTTGGCGGAATATAGTGTTAAGGAAAAAAATAGGCTAGAAagag > 1:376827/1‑251 (MQ=255) gATCTCTTGCGAGCCATCGGCGGTTTGCTTTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCt < 1:444068/199‑1 (MQ=255) ctTGCGAGCCATCGGCGGTTTGCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCt < 1:518580/235‑1 (MQ=255) tGCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAaaacaaac < 1:785560/251‑1 (MQ=255) gCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAaaacaaac > 1:20228/1‑250 (MQ=255) gCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAaaac > 1:251740/1‑246 (MQ=255) ctgctgCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATCGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGCATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCa > 1:641476/1‑249 (MQ=255) ctgctgCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCAc < 1:191160/250‑1 (MQ=255) ctgctgCACTTGTCGTAGGCTCTCGCCCCCCGGACGCTATCCGGCACTCTGCCCTGTGTAGCCTGGACTTTCCTCCCGCC‑CACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCt > 1:435437/1‑168 (MQ=255) tGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCt > 1:547814/1‑158 (MQ=255) tGTCGTAGGCTCTCGCCCCCCGGACGTTACCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCt < 1:445122/199‑1 (MQ=255) gTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCt > 1:725321/1‑157 (MQ=255) gTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCcgcg > 1:249816/1‑249 (MQ=255) gCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCtaataa < 1:97112/249‑1 (MQ=255) ctctCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAgg < 1:869067/250‑1 (MQ=255) ccccccGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGc < 1:289896/251‑1 (MQ=255) ttATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTAtt > 1:538266/1‑251 (MQ=255) tATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTAttt < 1:358598/251‑1 (MQ=255) cGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTacac < 1:396422/251‑1 (MQ=255) cGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTacac < 1:583571/251‑1 (MQ=255) cACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACAt < 1:249401/250‑1 (MQ=255) cACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACAt < 1:797540/250‑1 (MQ=255) gCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGt > 1:602351/1‑153 (MQ=255) cccTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGA‑TGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAgg < 1:262566/250‑1 (MQ=255) gtgtAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGc > 1:542505/1‑111 (MQ=255) gtgtAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCt < 1:769056/113‑1 (MQ=255) gtgtAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACACAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGaaa > 1:451765/1‑250 (MQ=255) gtgtAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTccc > 1:511087/1‑201 (MQ=255) gtgtAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTacac < 1:434668/237‑1 (MQ=255) gtgtAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCTGGaaa > 1:746773/1‑250 (MQ=255) gtgtAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGaaa > 1:136426/1‑250 (MQ=255) gtgtAGCCCGGACTTTCCTCCCGCC‑TACTTG‑T‑CCCCGGGTTACGGCTGCGGGAC‑GTTAAGGGGC‑TCAATTGACCGGCGATTGCCTGACCC‑ACCC‑CAG‑GGCCCAGGATAACCTTAATTCCTGGCGGAATATTGGGGTAAGGAAAAAAGTAAGCTAGAAAGAACGCCCCAAGAAAAGTTTCGGAAAAAAACCCCCCTTTTCCCCCGCCAAATAGGAAACCGCCAAGGACTTTTTACACATCCCTCAAGaaaa > 1:427725/1‑249 (MQ=255) aGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTac > 1:672832/1‑231 (MQ=255) gACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGtgtg > 1:46403/1‑251 (MQ=255) tttCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCT‑AATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGgaag < 1:768219/251‑1 (MQ=255) cccGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGGAAGAAAAc < 1:831782/251‑1 (MQ=255) cccGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGGAAGAAAACGCCCTCGGGCAACtt < 1:240936/251‑1 (MQ=255) cccGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGGAAGAAAACGCCCTCGGGCAACtt < 1:693013/251‑1 (MQ=255) gTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTAttt > 1:195352/1‑195 (MQ=255) gTTTACGCTTACGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTAttt > 1:602354/1‑195 (MQ=255) ttACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGGAAGAAAACGCCCTCGGGCAACTTAAACaa < 1:596177/251‑1 (MQ=255) aC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTacac < 1:702508/184‑1 (MQ=255) aC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGGAAGAAAACGCCCTCGGGCAACTTAAACAAAGATTAGACGGCa > 1:202301/1‑251 (MQ=255) gCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGGAAGAAAACGCCCTCGGGCAACTTAAACAAAGATTAGACGGCACTTTCGCCg > 1:618112/1‑251 (MQ=255) cTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAAccc > 1:145917/1‑190 (MQ=255) cTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGGAAGAAAACGCCCTCGGGCAACTTAAACAAAGATTAGACGGCACTTTCGCCGa > 1:282130/1‑251 (MQ=255) tCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCt > 1:246501/1‑48 (MQ=255) tCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGGAAGAAAACGCCCTCGGGCAACTTAAACAAAGATTAGACGGCACTTTCGCCGAcg > 1:746436/1‑251 (MQ=255) tCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGGAAGAAAACGCCCTCGGGCAACTTAAACAAAGATTAGACGGCACTTTCGCCGAcg > 1:74665/1‑251 (MQ=255) tCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGATCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTacac > 1:732613/1‑172 (MQ=255) cAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAAccc < 1:404315/187‑1 (MQ=255) aGACCGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAgg < 1:548124/144‑1 (MQ=255) cGGCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGGAAGAAAACGCCCTCGGGCAACTTAAACAAAGATTAGACGGCACTTTCGCCGACGTCGTAAAtt < 1:232674/251‑1 (MQ=255) gCGATTGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACAt > 1:107910/1‑163 (MQ=255) tGCCTGA‑CC‑AACT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGGAAGAAAACGcc > 1:262641/1‑192 (MQ=255) aaCT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGGAAGAAAACGCCCTCGGGCAACTTAAACAAAGATTAGACGGCACTTTCGCCGACGTCGTAAATTTGATTCTGAACTGCaa < 1:820844/251‑1 (MQ=255) aaCT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGGAAGAAAACGCCCTCGGGCAACTTAAACAAAGATTAGACGGCACTTTCGCCGACGTCGTAAATTTGATTCTGAACTGCaa > 1:131410/1‑251 (MQ=255) aCT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGGAAGAAAACGCCCTCGGGCAACTTAAACAAAGATTAGACGGCACTTTCGCCGACGTCGTAAATTTGATTCTGAACTGCaaa > 1:141809/1‑251 (MQ=255) aCT‑CAGGCGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTAGAAGAAAACGCCCTCGGGCAACTTAAACAAAGATTAGACGGCACTTTCGCCGACGTCGTAAATTTGATTCTGAACTGCaaa > 1:450332/1‑251 (MQ=255) | CTGCCAACCGTTACCGGCGGCACGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCTCTTGCGAGCCATCGGCGGTTTGCTCTCTGCTGCACTTGTCGTAGGCTCTCGCCCCCCGGACGTTATCCGGCACTCTGCCCTGTGTAGCCCGGACTTTCCTCCCGCC‑TACTTG‑TCCCCCGGTTTACGCTTGCGCGAC‑GTT‑AGGGGCTTCAATAGACCGGCGATTGCCTGA‑CC‑AACT‑CAGACGCGCAGTATAGCCTAAATTCTTGGCGAAATATAGTGTTAAGTAAAAAGTTAGGCTAGAATGAGCGCCACAAAAAACGTTCCGAAAACAAACCGCACTTTCCCCGCGCTAATAAGGAAACCGCAATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGGAAGAAAACGCCCTCGGGCAACTTAAACAAAGATTAGACGGCACTTTCGCCGACGTCGTAAATTTGATTCTGAACTGCAAA > 1/1536143‑1536627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |