| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 336,183 | A→G | intergenic (‑67905/+10321) | unknown ← / ← unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 336,183 | 0 | A | G | 100.0% | 216.2 / NA | 61 | intergenic (‑67905/+10321) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (31/30); total (31/30) | |||||||||||
GCCTTCTAGCTTTCCAATGTTTCTTACTTGTTGAACACGGAAAACATCTTTTTCATAATGAAAACTATAAAATACATTTCTCTTCATAATTATTTAACCTTTTTTAAAATTGACAAAATATTAGATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAACAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGT > 1/335937‑336422 | gCCTTCTAGCTTTCCAATGTTTCTTACTTGTTGAACACGGAAAACATCTTTTTCATAATGAAAACTATAAAATACATTTCTCTTCATAATTATTTAACCTTTTTTAAAATTGACAAAATATTAGATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGcagcaa > 1:223487/1‑250 (MQ=255) tttCCAATGTTTCTTACTTGTTGAACACGGAAAACATCTTTTTCATAATGAAAACTATAAAATACATTTCTCTTCATAATTATTTAACCTTTTTTAAAATTGACAAAATATTAGATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTaaa < 1:60306/251‑1 (MQ=255) gttgAACACGGAAAACATCTTTTTCATAATGAAAACTATAAAATACATTTCTCTTCATAATTATTTAACCTTTTTTAAAATTGACAAAATATTAGATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTgg > 1:67948/1‑251 (MQ=255) cATAATGAAAACTATAAAATACATTTCTCTTCATAATTATTTAACCTTTTTTAAAATTGACAAAATATTAGATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATAc < 1:756364/251‑1 (MQ=255) aaaCTATAAAATACATTTCTCTTCATAATTATTTAACCTTTTTTAAAATTGACAAAATATTAGATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGAt < 1:857730/251‑1 (MQ=255) cTATAAAATACATTTCTCTTCATAATTATTTAACCTTTTTTAAAATTGACAAAATATTAGATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAAc > 1:849287/1‑199 (MQ=255) aCATTTCTCTTCATAATTATTTAACCTTTTTTAAAATTGACAAAATATTAGATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGa > 1:595334/1‑208 (MQ=255) ctctTCATAATTATTTAACCTTTTTTAAAATTGACAAAATATTAGATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTc < 1:694964/251‑1 (MQ=255) ctTCATAATTATTTAACCTTTTTTAAAATTGACAAAATATTAGATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGAt > 1:590283/1‑231 (MQ=255) ctTCATAATTATTTAACCTTTTTTAAAATTGACAAAATATTAGATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCAtt > 1:232822/1‑248 (MQ=255) tAATTATTTAACCTTTTTTAAAATTGACAAAATATTAGATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAAc > 1:411278/1‑177 (MQ=255) atatTAGATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGAt > 1:641535/1‑195 (MQ=255) atatTAGATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATag > 1:50116/1‑241 (MQ=255) atatTAGATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATag < 1:92061/241‑1 (MQ=255) atatTAGATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATAcc < 1:549696/248‑1 (MQ=255) gATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATag > 1:798125/1‑235 (MQ=255) aTCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGAt > 1:615088/1‑188 (MQ=255) aTCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGaa < 1:702015/251‑1 (MQ=255) tCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATagag < 1:54701/235‑1 (MQ=255) ttAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATc < 1:525509/251‑1 (MQ=255) tAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTc > 1:633668/1‑197 (MQ=255) aTCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAg > 1:477379/1‑119 (MQ=255) aaTATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTc < 1:774785/125‑1 (MQ=255) atatTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGc < 1:508388/251‑1 (MQ=255) tCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTcc > 1:547551/1‑124 (MQ=255) tCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCAt > 1:10949/1‑152 (MQ=255) tCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATagag > 1:649424/1‑210 (MQ=255) tCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATag > 1:182057/1‑208 (MQ=255) aGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGaaa < 1:480501/198‑1 (MQ=255) aGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATagag < 1:319261/205‑1 (MQ=255) gATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAAtt > 1:57288/1‑250 (MQ=255) gTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATagag > 1:375890/1‑200 (MQ=255) ttCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATag > 1:22010/1‑182 (MQ=255) cAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAggg < 1:512552/251‑1 (MQ=255) cctTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAattt < 1:306084/154‑1 (MQ=255) cctTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATggg > 1:102442/1‑251 (MQ=255) cctTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATggg > 1:525595/1‑251 (MQ=255) ttAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCg < 1:127376/251‑1 (MQ=255) aGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTc < 1:124448/235‑1 (MQ=255) aCTCTTTATTCATCTCATTAACCCAGAGTTGTTTTGCCATATATGCAGTAGCAGCAACAGGGATTAAATCATTTCCATTCCTTTAGGAAATATCAAATTCCTCCTACATACCATTTGATAAAATCAAATTTCCATGCTGTAATTTATTTCCGAATAGAAATATag < 1:449386/165‑1 (MQ=255) ctctTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATAc > 1:47250/1‑110 (MQ=255) ctctTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAAC‑TTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCAt < 1:244016/112‑1 (MQ=255) tctTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCAt < 1:572164/107‑1 (MQ=255) ctTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAatttat < 1:255039/144‑1 (MQ=255) ctTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGa < 1:1237/178‑1 (MQ=255) ttATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCAt < 1:4061/130‑1 (MQ=255) tATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAg < 1:425568/251‑1 (MQ=255) tcATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAAGCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATc < 1:391999/251‑1 (MQ=255) cATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGAt > 1:881386/1‑104 (MQ=255) aTCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAattt > 1:445234/1‑126 (MQ=255) aTCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATg < 1:698456/221‑1 (MQ=255) aTCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTAttt > 1:524204/1‑251 (MQ=255) tCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAAt < 1:900992/235‑1 (MQ=255) ccAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTa > 1:546620/1‑251 (MQ=255) cAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGAt > 1:413426/1‑96 (MQ=255) agTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAAt < 1:8405/250‑1 (MQ=255) gttTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTcc > 1:545042/1‑189 (MQ=255) gttTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCct > 1:868544/1‑191 (MQ=255) gttTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGt > 1:341768/1‑251 (MQ=255) cATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGAt < 1:342132/82‑1 (MQ=255) atatCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGAt < 1:298049/251‑1 (MQ=255) atCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGt > 1:345567/1‑251 (MQ=255) | GCCTTCTAGCTTTCCAATGTTTCTTACTTGTTGAACACGGAAAACATCTTTTTCATAATGAAAACTATAAAATACATTTCTCTTCATAATTATTTAACCTTTTTTAAAATTGACAAAATATTAGATCTTAATTCATCTAGCGAAATATTTTCTTTAGATAGTGCTTGCATTTCATTTTCAACCTCCTTAGCAGACTCTTTATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAACAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGT > 1/335937‑336422 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |