Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,480,969 G→A intergenic (+148447/+120831) unknown → / ← unknown tRNA‑Met‑CAT/tRNA‑Val‑GAC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,480,9690GA100.0% 194.1 / NA 60intergenic (+148447/+120831)unknown/unknowntRNA‑Met‑CAT/tRNA‑Val‑GAC
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (30/30);  total (30/30)

CTTACCTTATGCGTTTTGTTATTCGTCGTATTCCGATTATAGGTTGAGGATTTTATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAGGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAGTTGTTATTAATCAGTCTGTTGCAGGCATTCCTCGGTTT  >  1/1480723‑1481214
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                     
cTTACCTTATGCGTTTTGTTATTCGTCGTATTCCGATTATAGGTTGAGGATTTTATGGCAATTTCGGCTTATGTGGGTATTCCGGGTAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAaggg                                                                                                                                                                                                                                                    <  1:34698/250‑1 (MQ=37)
cTTACCTTATGCGTTTTGTTATTCGTCGTATTCCGATTATAGGTTGAGGATTTTATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAaggg                                                                                                                                                                                                                                                    <  1:872192/250‑1 (MQ=255)
cTTACCTTATGCGTTTTGTTATTCGTCGTATTCCGATTATAGGTTGAGGATTTTATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAaggg                                                                                                                                                                                                                                                    <  1:201908/250‑1 (MQ=255)
cTTACCTTATGCGTTTTGTTATTCGTCGTATTCCGATTATAGGTTGAGGATTTTATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAaggg                                                                                                                                                                                                                                                    <  1:743831/250‑1 (MQ=255)
     cTTATGCGTTTTGTTATTCGTCGTATTCCGATTATAGGTTGAGGATTTTATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCtg                                                                                                                                                                                                                                              <  1:795785/251‑1 (MQ=38)
               ttggtATTCGTCGTATTCCGATTATAGGTTGAGGATTTTATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTg                                                                                                                                                                                                                                    >  1:264634/5‑251 (MQ=255)
               ttGTTATTCGTCGTATTCCGATTATAGGTTGAGGATTTTATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTg                                                                                                                                                                                                                                    >  1:131020/1‑251 (MQ=38)
                             aTTCCGATTATAGGTTGAGGATTTTATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCtg                                                                                                                                                                                                                                              <  1:60434/227‑1 (MQ=25)
                                  gATTATAGGTTGAGGATTTTATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGAttttttt                                                                                                                                                                                                                 >  1:680396/1‑251 (MQ=25)
                                   aTTATAGGTTGAGGATTTTATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAaggg                                                                                                                                                                                                                                                    >  1:787386/1‑215 (MQ=25)
                                   aTTATAGGTTGAGGATTTTATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGAttttttt                                                                                                                                                                                                                 >  1:646136/1‑250 (MQ=25)
                                              aGGATTTTATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGATTTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAggg                                                                                                                                                                                                      <  1:716231/250‑1 (MQ=255)
                                              aGGATTTTATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAggg                                                                                                                                                                                                      <  1:516232/250‑1 (MQ=38)
                                                gATTTTATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGt                                                                                                                                                                                                     <  1:22131/249‑1 (MQ=39)
                                                  ttttATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACATACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAggg                                                                                                                                                                                                      <  1:768120/246‑1 (MQ=255)
                                                  ttttATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGtg                                                                                                                                                                                                 >  1:304751/1‑251 (MQ=255)
                                                  ttttATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGtg                                                                                                                                                                                                 >  1:590298/1‑251 (MQ=255)
                                                       tGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCtga                                                                                                                                                                                                                                             <  1:658632/202‑1 (MQ=25)
                                                         gCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGaaa                                                                                                                                                                                           <  1:173359/250‑1 (MQ=255)
                                                                     tATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAaggg                                                                                                                                                                                                                                                    >  1:749558/1‑181 (MQ=37)
                                                                         tgGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTc                                                                                                                                                                           <  1:272352/250‑1 (MQ=255)
                                                                          gggTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGAt                                                                                                                                                                                                                                      >  1:403199/1‑190 (MQ=37)
                                                                                         cGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCgatttgattt                                                                                                                                                             <  1:892824/248‑1 (MQ=255)
                                                                                               aTCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCtg                                                                                                                                                                                                                                              >  1:540378/1‑161 (MQ=17)
                                                                                               aTCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGaaa                                                                                                                                                                                           >  1:32730/1‑212 (MQ=255)
                                                                                               aTCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATtgatg                                                                                                                                                    >  1:247832/1‑251 (MQ=255)
                                                                                                tCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATtgatga                                                                                                                                                   >  1:115738/1‑251 (MQ=255)
                                                                                                 cTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGaa                                                                                                                                                  >  1:60339/1‑251 (MQ=255)
                                                                                                        ggtggtTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATAc                                                                                                                                                                                       <  1:53980/207‑1 (MQ=255)
                                                                                                         gtggtTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTgg                                                                                                                                            <  1:741524/249‑1 (MQ=255)
                                                                                                         gtggtTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTgg                                                                                                                                            <  1:18178/249‑1 (MQ=255)
                                                                                                                cttcGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGt                                                                                                                                                                                                     <  1:167328/185‑1 (MQ=17)
                                                                                                                cttcGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTAtttt                                                                                                                                    >  1:19857/1‑250 (MQ=255)
                                                                                                                                      tctcAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCa                                                                                                             >  1:105995/1‑251 (MQ=255)
                                                                                                                                           aaGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAatcat                                                                                                        >  1:484724/1‑251 (MQ=255)
                                                                                                                                              gAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAggg                                                                                                                                                                                                      >  1:452765/1‑154 (MQ=14)
                                                                                                                                                      aTTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTAt                                                                                             <  1:489935/251‑1 (MQ=255)
                                                                                                                                                      aTTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTAt                                                                                             <  1:88996/251‑1 (MQ=255)
                                                                                                                                                       ttGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATAc                                                                                                                                                                                       <  1:71884/160‑1 (MQ=255)
                                                                                                                                                                atatTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTAt                                                                                             <  1:99828/241‑1 (MQ=255)
                                                                                                                                                                      ggggAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCAt                                                                             >  1:582455/2‑251 (MQ=255)
                                                                                                                                                                         gAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAggg                                                                                                                                                                                                      >  1:856208/1‑127 (MQ=17)
                                                                                                                                                                            tAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTAcc                                                                       <  1:7640/251‑1 (MQ=255)
                                                                                                                                                                                        aaGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACg                                                           >  1:308037/1‑251 (MQ=255)
                                                                                                                                                                                         aGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATc                                                                                                               <  1:222050/198‑1 (MQ=255)
                                                                                                                                                                                          gTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAg                                                                                                                                                                             >  1:685935/1‑135 (MQ=255)
                                                                                                                                                                                             aGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGt                                                      >  1:396606/1‑251 (MQ=255)
                                                                                                                                                                                                gAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCg                                                       >  1:512494/1‑247 (MQ=255)
                                                                                                                                                                                                   tATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTttgt                                                  <  1:133421/249‑1 (MQ=255)
                                                                                                                                                                                                   tATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTttgt                                                  <  1:28372/249‑1 (MQ=255)
                                                                                                                                                                                                       gTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTcc                                                                                                                                  >  1:584399/1‑165 (MQ=255)
                                                                                                                                                                                                       gTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGAt                                            >  1:613424/1‑251 (MQ=255)
                                                                                                                                                                                                        tttAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGAt                                            <  1:866095/250‑1 (MQ=255)
                                                                                                                                                                                                            aaCAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGCAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAgt                                       >  1:450897/1‑251 (MQ=255)
                                                                                                                                                                                                              cAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAgttg                                     <  1:472231/251‑1 (MQ=255)
                                                                                                                                                                                                                     aaTGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAGTTGTTATTaa                              <  1:891015/251‑1 (MQ=255)
                                                                                                                                                                                                                       tGCCAAGGAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAGTTGTTATTAATc                            <  1:252098/251‑1 (MQ=255)
                                                                                                                                                                                                                              gAAGACGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAGTTGTTATTAATCAGTCt                       <  1:653214/249‑1 (MQ=255)
                                                                                                                                                                                                                                  gcGATTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAGTTGTTATTAATCAGTCTGTTGc                  <  1:827302/249‑1 (MQ=255)
                                                                                                                                                                                                                                     aTTTAGGGCAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCgatttgatt                                                                                                                                                              >  1:474572/1‑107 (MQ=255)
                                                                                                                                                                                                                                             cAATTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTAcc                                                                       <  1:706492/186‑1 (MQ=255)
                                                                                                                                                                                                                                               aTTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAGTTGTTATTAATCAGTCTGTTGCAGGCATTCCTCGGt    >  1:710291/1‑251 (MQ=255)
                                                                                                                                                                                                                                               aTTAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAGTTGTTATTAATCAGTCTGTTGCAGGCATTCCTCGGt    >  1:566282/1‑251 (MQ=255)
                                                                                                                                                                                                                                                ttAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAGTTGTTATTAAt                             <  1:576437/225‑1 (MQ=255)
                                                                                                                                                                                                                                                ttAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAGTTGTTATTAATCAGTCTGTTGCAGGCATTCCTCGGtt   >  1:91805/1‑251 (MQ=255)
                                                                                                                                                                                                                                                ttAATAAGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAGTTGTTATTAATCAGTCTGTTGCAGGCATTCCTCGGtt   >  1:718872/1‑251 (MQ=255)
                                                                                                                                                                                                                                                 taataaGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGa                                                                                                                        >  1:732241/1‑133 (MQ=255)
                                                                                                                                                                                                                                                 taataaGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCttt                                                                                                <  1:96647/157‑1 (MQ=255)
                                                                                                                                                                                                                                                 taataaGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCg                                                       >  1:512997/1‑198 (MQ=255)
                                                                                                                                                                                                                                                 taataaGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAGTTGttatt                                <  1:435710/221‑1 (MQ=255)
                                                                                                                                                                                                                                                 taataaGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAGTTGTTATTAATc                            <  1:795232/225‑1 (MQ=255)
                                                                                                                                                                                                                                                 taataaGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAGTTGTTATTAATCAGTCTGTTGCAGGCATTCCTCgg     >  1:447011/1‑248 (MQ=255)
                                                                                                                                                                                                                                                 taataaGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAGTTGTTATTAATCAGTCTGTTGCAGGCATTCCTCGGttt  >  1:67871/1‑251 (MQ=255)
                                                                                                                                                                                                                                                 taataaGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAGTTGTTATTAATCAGTCTGTTGCAGGCATTCCTCGGttt  >  1:154149/1‑251 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                     
CTTACCTTATGCGTTTTGTTATTCGTCGTATTCCGATTATAGGTTGAGGATTTTATGGCAATTTCGGCTTATGTGGGTATTCCGGGCAGCGGTAAATCTTATGAGGTGGTTTCTTCGGTGATTGTTGAGAATTATCTCAAAGGAAGACGCATTGTAACGAATATTGAGGGAATAACAGACGAAAAAGTAAGGGAGTATTGTTTAAACAAAAAGAATGCCAAGGAAGACGATTTAGGGCAATTAATAGGGGTATCTGATGAAGATTGTCAGCGTGATGATTTTTTTCCGTATAAGGGTAGTGATGAAAATACGATTTGTAAGTCAGGCGATTTGATTTGTATTGATGAAGTGTGGCGTATTTTCCCGACTAATGAAATTAAATCCAATCATCGGTCTTTTATTGCCGAACATCGTCATTTTACCGATGAAGAAACGGGCGTTTGTTGTGATTTAGTTGTTATTAATCAGTCTGTTGCAGGCATTCCTCGGTTT  >  1/1480723‑1481214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑