Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,462,127 T→C intergenic (+129605/+139673) unknown → / ← unknown tRNA‑Met‑CAT/tRNA‑Val‑GAC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,462,1270TC100.0% 223.9 / NA 64intergenic (+129605/+139673)unknown/unknowntRNA‑Met‑CAT/tRNA‑Val‑GAC
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (41/23);  total (41/23)

GATTTGGAAGAAATTATTCAAAAGGAAGTGGACCCGGGTTTGGGGAACGGCGGTTTAGGTCGTTTGGCGGCTTGTTTTATGGATTCTATTGCAACGTTGGGCTTACCGGGCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCATTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATGGGCGGCACACGCCGGTGAAATGTTCAATTTAGAAGATTTCAACCGTGGTCAACATATTGCGGCGATGGAAAGCCGTGCATCAATTAAAAACC  >  1/1461883‑1462354
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                   
gATTTGGAAGAAATTATTCAAAAGGAAGTGGACCCGGGTTTGGGGAACGGCGGTTTTGGTCGTTTGGCGGCTTGTTTTATGGATTCTATTGCAACGTTTGGCTTACCGGGCATGGGGTATGGTATTCGTTACGAATATGGGATGTTTCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGGTGGGAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTc                                                                                                                                                                                                                                >  1:752017/1‑250 (MQ=255)
 aTTTGGAAGAAATTATTCAAAAGGAAGTGGACCCGGGTTTGGGGAACGGCGGTTTAGGTCGTTTTGCGGGTTGTTTTATGGGTTTTATTGGAACGTTGGGGTTTCCGGGGATGGGGTATGGGATTTGTTTCGAATATGGAATGTTTCGGCAAAAAATTGAAGACGGGCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGGGCAACGTGGGGGTTTATTCGCCCGGCTAAACGGTTCACTATTc                                                                                                                                                                                                                                >  1:801163/1‑249 (MQ=255)
      gaagaaATTATTCAAAAGGAAGTGGACCCGGGTTTGGGGAACGGCGGTTTAGGTCGTTTGGCGGCTTGTTTTATGGATTCTATTGCAACGTTGGGCTTACCGGGCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTcg                                                                                                                                                                                                                          <  1:727074/250‑1 (MQ=255)
                             ggACCCGGGTTTGGGGAACGGCGGTTTAGGTCGTTTTGCGGCTTGTTTTATGGATTTTATTGCAACGTTGGGCTTACCGGGCATGGGGGATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGGCAACAGGGAGAACGCCCGGATGCGTGGGTGGAAAAAGGGGCACCGTGGGGGGTTATTCGCCCGTCTAAACGGTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACa                                                                                                                                                                                                  >  1:413459/1‑251 (MQ=255)
                                               cggcggTTTAGGTCGTTTGGCGGCTTGTTTTATGGATTCTATTGCAACGTTGGGCTTACCGGGCATGGGGGATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGgcag                                                                                                                                                                                                                   >  1:196037/1‑216 (MQ=255)
                                                   ggTTTAGGTCGTTTGGCGGCTTGTTTTATGGATTCTATTGCAACGTTGGGCTTACCGGGCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCgg                                                                                                                                                                            >  1:284825/1‑251 (MQ=255)
                                                       tAGGTCGTTTGGCGGCTTGTTTTATGGATTCTATTGCAACGTTGGGCTTACCGGGCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCGGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAg                                                                                                                                                                        <  1:589482/251‑1 (MQ=255)
                                                                        tGTTTTATGGATTCTATTGCAACGTTGGGCTTACCGGGCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGc                                                                                                                                                       <  1:692287/251‑1 (MQ=255)
                                                                         gTTTTATGGATTCTATTGCAACGTTGGGCTTACCGGGCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGc                                                                                                                                                       >  1:812130/1‑250 (MQ=255)
                                                                                  aTTCTATTGCAACGTTGGGCTTACCGGGCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCaa                                                                                                                                             >  1:378807/1‑251 (MQ=255)
                                                                                   ttCTATTGCAACGTTGGGCTTACCGGGCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTg                                                                                                                                                                          >  1:433606/1‑221 (MQ=255)
                                                                                     cTATTGCAACGTTGGGCTTACCGGGCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACt                                                                                                                                                                                                           <  1:792445/186‑1 (MQ=255)
                                                                                     cTATTGCAACGTTGGGCTTACCGGGCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATg                                                                                                                                                                                           <  1:833706/202‑1 (MQ=255)
                                                                                     cTATTGCAACGTTGGGCTTACCGGGCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGt                                                                                                                                                           <  1:157214/234‑1 (MQ=255)
                                                                                     cTATTGCAACGTTGGGCTTACCGGGCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGtt                                                                                                                                          <  1:397134/251‑1 (MQ=255)
                                                                                       aTTGCAACGTTGGGCTTACCGGGCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGt                                                                                                                                                           >  1:776477/1‑232 (MQ=255)
                                                                                                  gggCTTACCGGGCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTAt                                                                                                                              >  1:774498/1‑250 (MQ=255)
                                                                                                   ggCTTACCGGGCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCa                                                                                                                            >  1:771265/1‑251 (MQ=255)
                                                                                                       tACCGGGCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAAt                                                                                                                        >  1:434233/1‑251 (MQ=255)
                                                                                                            ggCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGAtt                                                                                                                    >  1:294805/1‑250 (MQ=255)
                                                                                                            ggCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGAtt                                                                                                                    >  1:257880/1‑250 (MQ=255)
                                                                                                            ggCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGAtt                                                                                                                    >  1:410275/1‑250 (MQ=255)
                                                                                                            ggCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGAtt                                                                                                                    >  1:875801/1‑250 (MQ=255)
                                                                                                             gCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGAtt                                                                                                                    >  1:660190/1‑249 (MQ=255)
                                                                                                              cATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCgg                                                                                                                                                                            >  1:294787/1‑192 (MQ=255)
                                                                                                                 ggggTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTg                                                                                                                                                                          >  1:131847/1‑191 (MQ=255)
                                                                                                                  gggTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCtt                                                                                                                                                                                                                             >  1:350828/1‑139 (MQ=255)
                                                                                                                  gggTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGtt                                                                                                                                          <  1:4801/222‑1 (MQ=255)
                                                                                                                  gggTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTgcag                                                                                                              >  1:768079/1‑250 (MQ=255)
                                                                                                                  gggTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTgcag                                                                                                              >  1:775906/1‑250 (MQ=255)
                                                                                                                  gggTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTgcag                                                                                                              >  1:791190/1‑250 (MQ=255)
                                                                                                                  gggTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTgcag                                                                                                              >  1:140157/1‑250 (MQ=255)
                                                                                                                    gtatggtatTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTgcag                                                                                                              >  1:678917/1‑248 (MQ=255)
                                                                                                                         gtatTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTa                                                                                                      >  1:228444/1‑251 (MQ=255)
                                                                                                                           atTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACg                                                                                                    <  1:140722/251‑1 (MQ=255)
                                                                                                                            ttCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGt                                                                                                   <  1:838854/251‑1 (MQ=255)
                                                                                                                            ttCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGt                                                                                                   <  1:545161/251‑1 (MQ=255)
                                                                                                                            ttCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGt                                                                                                   <  1:671714/251‑1 (MQ=255)
                                                                                                                            ttCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGt                                                                                                   <  1:482477/251‑1 (MQ=255)
                                                                                                                               gTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGtt                                                                                                  >  1:819286/1‑249 (MQ=255)
                                                                                                                                 tACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTc                                                                                                                   >  1:69143/1‑230 (MQ=255)
                                                                                                                                     aaTATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTcc                                                                                                                                                                                                                               >  1:185017/1‑118 (MQ=255)
                                                                                                                                        atGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTc                                                                                                                   <  1:570622/223‑1 (MQ=255)
                                                                                                                                          ggAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTggg                                                                                                                                                                                   <  1:691603/157‑1 (MQ=255)
                                                                                                                                                             ttGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATGGGCGGCACACGCCGGTGAAATGTTCAAt                                                                  <  1:362639/251‑1 (MQ=255)
                                                                                                                                                                     ggTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATggg                                                                                            >  1:335466/1‑217 (MQ=255)
                                                                                                                                                                      gTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATggg                                                                                            <  1:324035/216‑1 (MQ=255)
                                                                                                                                                                      gTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATGGGCGGCACACGCCGGTGAAATGTTCAAt                                                                  >  1:62442/1‑242 (MQ=255)
                                                                                                                                                                      gTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATGGGCGGCACACGCCGGTGAAATGTTCAATTTAGAAGAt                                                         >  1:366294/1‑251 (MQ=255)
                                                                                                                                                                           cAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATGGGCGGCACACGCCGGTGAAATGTTCAATTTAGAAGATTTCaa                                                    >  1:445453/1‑251 (MQ=255)
                                                                                                                                                                             ggTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGtt                                                                                                                                          <  1:698079/163‑1 (MQ=255)
                                                                                                                                                                             ggTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAG‑‑‑‑‑‑‑GCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATg                                                                                                                                                                                           >  1:583269/1‑107 (MQ=255)
                                                                                                                                                                               tAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATGGGCGGCACACGCCGGTGAAATGTTCAATTTAGAAGATTTCAACCg                                                 <  1:759810/250‑1 (MQ=255)
                                                                                                                                                                                        cGGATGTGTGGTTGAAAAAAGGTGCTCCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGTATTCACTTTGAAGCCAAAAAATGTATTTGGGACACCGGTGAGCGCGTCGTAGCGTTGGCCAATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATGGGCGGCACACGCCGGTGAAATGTTCAATTTAGAAGATTTCAACCGTGGTCAACat                                       <  1:251530/251‑1 (MQ=255)
                                                                                                                                                                                                     ggAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATGGGCGGCACACGCCGGTGAAATGTTCAATTTAGAAGATTTCAACCGTGGTCAACATATTGCGGCGATgg                          >  1:855748/1‑251 (MQ=255)
                                                                                                                                                                                                          aaGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATGGGCGGCACACGCCGGTGa                                                                            >  1:3753/1‑196 (MQ=255)
                                                                                                                                                                                                          aaGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATGGGCGGCACACGCCGGTGAAATGTTCAATTTAGAAGATTTCAACCGTGGTCAACATATTGCGGCGATGGAAAGc                     <  1:330745/251‑1 (MQ=255)
                                                                                                                                                                                                            ggTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATGGGCGGCACACGCCGGTGaaa                                                                          >  1:815343/1‑196 (MQ=255)
                                                                                                                                                                                                             gTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATGGGCGGCACACGCCGGTGAAATGTTCAATTTAGAAGATTTCAACCGTGGTCAACATATTGCGGCGATGGAAAGCCGt                  >  1:567189/1‑251 (MQ=255)
                                                                                                                                                                                                                    gTGGGAGTTTATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATGGGCGGCACACGCCGGTGAAATGTTCAATTTagaag                                                           >  1:563179/1‑203 (MQ=255)
                                                                                                                                                                                                                            ttATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGc                                                                                                                                                             >  1:740759/1‑97 (MQ=255)
                                                                                                                                                                                                                             tATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATGGGCGGCACACGCCGGTGAAATGTTCAATTTAGAAGATTTCAACCGTGGTCAACATATTGCGGCGATGGAAAGCCGTGCATCAATTAAAAAcc  <  1:639073/251‑1 (MQ=255)
                                                                                                                                                                                                                             tATTCGCCCGTCTAAACGTTTCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATGGGCGGCACACGCCGGTGAAATGTTCAATTTAGAAGATTTCAACCGTGGTCAACATATTGCGGCGATGGAAAGCCGTGCATCAATTAAAAAcc  <  1:41354/251‑1 (MQ=255)
                                                                                                                                                                                                                                               tttCACTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATGGGCGGCACACGCCGGTGAAATGTTCAATTTAGAAGATTTCAACCg                                                 >  1:291736/1‑186 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                   
GATTTGGAAGAAATTATTCAAAAGGAAGTGGACCCGGGTTTGGGGAACGGCGGTTTAGGTCGTTTGGCGGCTTGTTTTATGGATTCTATTGCAACGTTGGGCTTACCGGGCATGGGGTATGGTATTCGTTACGAATATGGAATGTTCCGGCAAAAAATTGAAGACGGTCAACAGGTAGAACGCCCGGATGCGTGGTTGGAAAAAGGTGCACCGTGGGAGTTTATTCGCCCGTCTAAACGTTTCATTATTCCTTTCGGCGGCAGCATTCACTTTGAAGACAAAAAATGTATTTGGGACATCGGTGAGCGCGTCGTAGCGTTGGCCTATGACCAAGTTATCCCGGGCTATCAAAATGATTCTGCAGCAACCTTACGTTTATGGGCGGCACACGCCGGTGAAATGTTCAATTTAGAAGATTTCAACCGTGGTCAACATATTGCGGCGATGGAAAGCCGTGCATCAATTAAAAACC  >  1/1461883‑1462354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑