| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,069,137 | T→C | intergenic (‑15935/‑13658) | unknown ← / → unknown | tRNA‑Gly‑GCC/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,069,137 | 0 | T | C | 100.0% | 200.9 / NA | 60 | intergenic (‑15935/‑13658) | unknown/unknown | tRNA‑Gly‑GCC/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (37/23); total (37/23) | |||||||||||
ATTATGGACAAACGCCTTTCCAAAATTTATCAGGAATGGGCAGGGACCCGTTATCGTTTTGGCGGCACCACAAAAAATGGCATTGATTGTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATATGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCAACTAAACTATGGATTTTTATGGTCAAACATTATTCAATCGAATTCAAACATCATATCATCCGCCGACGTAAGCAAGCGGA > 1/1068892‑1069382 | aTTATGGACAAACGCCTTTCCAAAATTTATCAGGAATGGGCAGGGACCCGTTATCGTTTTGGCGGCACCACAAAAAATGGCATTGATTGTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCgg > 1:348078/1‑251 (MQ=255)aTTATGGACAAACGCCTTTCCAAAATTTATCAGGAATGGGCAGGGACCCGTTATCGTTTTGGCGGCACCACAAAAAATGGCATTGATTGTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCgg > 1:540335/1‑251 (MQ=255) ttCCAAAATTTATCAGGAATGGGCAGGGACCCGTTATCGTTTTGGCGGCACCACAAAAAATGGCATTGATTGTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATg > 1:505286/1‑250 (MQ=255) gAATGGGCAGGGACCCGTTATCGTTTTGGCGGCACCACAAAAAATGGCATTGATTGTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGcc < 1:331034/250‑1 (MQ=255) gAATGGGCAGGGACCCGTTATCGTTTTGGCGGCACCACAAAAAATGGCATTGATTGTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCg > 1:866405/1‑251 (MQ=255) gACCCGTTATCGTTTTGGCGGCACCACAAAAAATGGCATTGATTGTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGatta > 1:834486/1‑251 (MQ=255) tATCGTTTTGGCGGCACCACAAAAAATGGCATTGATTGTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTc < 1:426409/251‑1 (MQ=255) cGTTTTGGCGGCACCACAAAAAATGGCATTGATTGTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTg > 1:607134/1‑244 (MQ=255) gTTTTGGCGGCACCACAAAAAATGGCATTGATTGTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGc > 1:622879/1‑213 (MQ=255) tttGGCGGCACCACAAAAAATGGCATTGATTGTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAg < 1:729667/251‑1 (MQ=255) ccgcaAAAAATGGCATTTATTGTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGGCTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTAc < 1:777883/248‑1 (MQ=255) aaaaaaTGGCATTGATTGTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTggg < 1:311982/251‑1 (MQ=255) gattgTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTAc > 1:405895/1‑194 (MQ=255) ttgTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATAccc < 1:634016/251‑1 (MQ=255) ttgTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATAccc < 1:373532/251‑1 (MQ=255) ttgTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATAccc < 1:771726/251‑1 (MQ=255) gCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATAccc < 1:772085/243‑1 (MQ=255) aTGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAg > 1:257809/1‑201 (MQ=255) caccTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATAccc > 1:256286/1‑230 (MQ=255) ccTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGtt < 1:873537/251‑1 (MQ=255) ttttAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTAc > 1:404649/1‑166 (MQ=255) ttttAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGtt < 1:523957/248‑1 (MQ=255) ttttAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGa > 1:509321/1‑251 (MQ=255) tGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCg < 1:451889/185‑1 (MQ=255) gtgtGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACaa < 1:214614/153‑1 (MQ=255) gtgtGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATaaaa > 1:355086/1‑251 (MQ=255) gACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATaatgtttg > 1:380264/1‑245 (MQ=255) aCATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATAc > 1:9528/1‑203 (MQ=255) cgcgTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCAt < 1:347694/251‑1 (MQ=255) cAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTAc > 1:583845/1‑122 (MQ=255) gCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTAc > 1:581035/1‑120 (MQ=255) gCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAg > 1:849099/1‑200 (MQ=255) gCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGAtt < 1:344684/207‑1 (MQ=255) gCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGAt > 1:677673/1‑211 (MQ=255) gCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCAcaa > 1:139891/1‑250 (MQ=255) gTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGc > 1:669631/1‑117 (MQ=255) cGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATAc > 1:76873/1‑236 (MQ=255) cGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCaactaaac < 1:374286/251‑1 (MQ=255) cGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCaactaaac < 1:279782/251‑1 (MQ=255) cGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCaactaaac < 1:220648/251‑1 (MQ=255) cGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCaactaaac < 1:651857/251‑1 (MQ=255) cGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCaactaaac < 1:678161/251‑1 (MQ=255) gTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATAccc > 1:347656/1‑168 (MQ=255) aTTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCACCTAAACTATGGAtttt > 1:513978/1‑251 (MQ=255) aaagaaagAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCAACTAAACTATGGATTTTTATgg > 1:215231/1‑251 (MQ=255) agaaCTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAg > 1:865286/1‑120 (MQ=255) gaaCTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATAccc > 1:277107/1‑148 (MQ=255) aaCTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCAACTAAACTATGGATTTTTATGGTCAAACat > 1:657697/1‑251 (MQ=255) aaCTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCAACTAAACTATGGATTTTTATGGTCAAACat > 1:450364/1‑251 (MQ=255) aaaGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCAACTAAACTATGGATTTTTATGGTCAAACATTATTc < 1:234727/251‑1 (MQ=255) gTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATcc > 1:620671/1‑132 (MQ=255) gTTTTTTTCCGTAGAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCAACTAAACTATGGATTTTTATGGTCAAACATTATTCAATCGAATTCAAAca > 1:724202/1‑251 (MQ=255) gAAATAATCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCAACTAAACTATGGATTTTTATGGTCAAACATTATTCAATCGAATTCAAACATCATATCATccg > 1:705674/1‑250 (MQ=255) tCATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCAACTAAACTATGGATTTTTATGGTCAAACATTATTCAATCGAATTCAAACatcatatca < 1:835903/239‑1 (MQ=255) cATGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCAACTAAACTATGGATTTTTATGGTCAAACATTATTCAATCGAATTCAAACatcatat < 1:153652/236‑1 (MQ=255) aTGTAGGCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGc > 1:226873/1‑156 (MQ=255) ggCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCAACTAAACTATGGATTTTTATGGTCAAACATTATTCAATCGAATTCAAACATCATATCATCCGCCGACGTaagcaag > 1:765166/1‑250 (MQ=255) ggCGTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCAACTAAACTATGGATTTTTATGGTCAAACATTATTCAATCGAATTCAAACATCATATCATCCGCCGACGTaagcaag > 1:376468/1‑250 (MQ=255) gTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCAACTAAACTATGGATTTTTATGGTCAAACATTATTCAATCGAATTCAAACatcatatc > 1:436864/1‑228 (MQ=255) gTATACGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCAACTAAACTATGGATTTTTATGGTCAAACATTATTCAATCGAATTCAAACATCATATCATCCGCCGACGTAAGCAAGCGGa > 1:816400/1‑251 (MQ=255) | ATTATGGACAAACGCCTTTCCAAAATTTATCAGGAATGGGCAGGGACCCGTTATCGTTTTGGCGGCACCACAAAAAATGGCATTGATTGTTCCGGCTTTATGCAAACCACCTTTTTAGATGCGTTTGGTGTGACATTGCCGCGTTCGACTTCCGAACAGCGTTATGTCGGTAAAGCGATTCAAAAGAAAGAACTGAAAGTGGGCGATTTGGTTTTTTTCCGTAGAAATAATCATGTAGGCGTATATGTCGGCAACGATCAGTTTATGCATTCCAGTACAAGCCGAGGCGTGATTATTGAGTCCTTAAGCGACAATTACTGGGCGAGAACGTATACCCAATCCCGTCGGGTTCTTTAAGTTTGATTAGATTGAATAAAAAGTATTCTGCATCCCAATCAGATACCACAACCAACTAAACTATGGATTTTTATGGTCAAACATTATTCAATCGAATTCAAACATCATATCATCCGCCGACGTAAGCAAGCGGA > 1/1068892‑1069382 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |