Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,040,377	T→C	intergenic (‑37304/+12536)	unknown ← / ← unknown	tRNA‑Lys‑TTT/tRNA‑Lys‑TTT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,040,377	0	T	C	100.0%	200.3 / NA	57	intergenic (‑37304/+12536)	unknown/unknown	tRNA‑Lys‑TTT/tRNA‑Lys‑TTT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (28/29);  total (28/29)

AGACTGGTTGAAGCCTATTTAGATGCAAAGAAAACCTTATCAGATGACGACTTTATGAGGCTACCTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTATATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTGATAGTAATACATATAAACGCAAGTATTTTAAAGTATATTTCATCCCACAGGAGACTGACTTTAATACCAAAA  >  1/1040142‑1040532                                                                                                                                                                                                                                            |                                                                                                                                                            agaCTGGTTGAAGCCTATTTAGATGCAAAGAAAACCTTATCAGATGACGACTTTATGAGGCTACCTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTa                                                                                                                                               <  1:411966/250‑1 (MQ=255)  gaCTGGTTGAAGCCTATTTAGATGCAAAGAAAACCTTATCAGATGACGACTTTATGAGGCTACCTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTcc                                                                                                                                                 >  1:152780/1‑247 (MQ=255)     tGGTTGAAGCCTATTTAGATGCAAAGAAAACCTTATCAGATGACGACTTTATGAGGCTACCTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGc                                                                                                                                          <  1:109802/251‑1 (MQ=255)       gTTGAAGCCTATTTAGATGCAAAGAAAACCTTATCAGATGACGACTTTATGAGGCTACCTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCtt                                                                                                                                        >  1:625850/1‑251 (MQ=255)           aaGCCTATTTAGATGCAAAGAAAACCTTATCAGATGACGACTTTATGAGGCTACCTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAgg                                                                                                                                     <  1:29136/250‑1 (MQ=255)                 aTTTAGATGCAAAGAAAACCTTATCAGATGACGACTTTATGAGGCTACCTCTTAAGGTGGCTGATTCAAATGTGAAATACTGATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTaaa                                                                                                                              <  1:440062/251‑1 (MQ=255)                            aaGAAAACCTTATCAGATGACGACTTTATGAGGCTACCTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTc                                                                                                                                                  >  1:897377/1‑220 (MQ=255)                                 aaCCTTATCAGATGACGACTTTATGAGGCTACCTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGaaa                                                                                                              >  1:779129/1‑251 (MQ=255)                                       aTCAGATGACGACTTTATGAGGCTACCTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTAcc                                                                                                        <  1:843465/251‑1 (MQ=255)                                        tCAGATGACGACTTTATGAGGCTACCTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCa                                                                                                       <  1:363954/251‑1 (MQ=255)                                                cgacTTTATGAGGCTACCTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTa                                                                                               >  1:81687/1‑251 (MQ=255)                                                   cTTTATGAGGCTACCTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGaa                                                                                            <  1:1650/251‑1 (MQ=255)                                                          aGGCTACCTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCg                                                                                     >  1:472981/1‑251 (MQ=255)                                                            gCTACCTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCg                                                                                     <  1:164137/249‑1 (MQ=255)                                                             cTACCTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTc                                                                                  <  1:122610/251‑1 (MQ=255)                                                               aCCTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGa                                                                                                                                   >  1:639775/1‑200 (MQ=255)                                                                ccTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCAc                                                                                                                                                        <  1:148521/178‑1 (MQ=255)                                                                ccTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGaaa                                                                                                              >  1:169911/1‑220 (MQ=255)                                                                 ctctTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTaaaa                                                                                                                             >  1:304321/1‑204 (MQ=255)                                                                 ctctTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCAt                                                                                                      <  1:584891/227‑1 (MQ=255)                                                                 ctctTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAg                                                                                              <  1:690615/235‑1 (MQ=255)                                                                 ctctTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACat                                                                              >  1:758737/1‑251 (MQ=255)                                                                  tctTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACata                                                                             <  1:51170/251‑1 (MQ=255)                                                                  tctTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACata                                                                             <  1:101236/251‑1 (MQ=255)                                                                     tAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTg                                                                          >  1:75043/1‑251 (MQ=255)                                                                     tAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTg                                                                          <  1:557661/251‑1 (MQ=255)                                                                         gTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTGAt                                                                        <  1:831540/249‑1 (MQ=255)                                                                               gATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAgacg                                                                                                                        >  1:20189/1‑195 (MQ=255)                                                                               gATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGaa                                                                                                               <  1:141337/204‑1 (MQ=255)                                                                                aTTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTGATAGTAATAc                                                                <  1:655940/250‑1 (MQ=255)                                                                                 ttCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTAGCATTATCGTAGAATGCTTCGTTCACATATTGATAGTAATACat                                                              <  1:702487/251‑1 (MQ=255)                                                                                    aaaTGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTGATAGTAATACAtata                                                           <  1:389760/251‑1 (MQ=255)                                                                                     aaTGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTcaca                                                                               >  1:112622/1‑230 (MQ=255)                                                                                        gtgAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGa                                                                                                                                   <  1:139039/175‑1 (MQ=255)                                                                                        gtgAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGAGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTcaca                                                                               >  1:57890/1‑227 (MQ=255)                                                                                               aCTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTg                                                                          >  1:860421/1‑225 (MQ=255)                                                                                               aCTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGCGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTGATAGTAATACATATAAACGCAAGTAt                                                >  1:547475/1‑251 (MQ=255)                                                                                                     aCCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTGATAGTAATAc                                                                >  1:364387/1‑229 (MQ=255)                                                                                                      ccAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCGTTATCGTAGAATGCTTCGTTCACATATTGATAg                                                                      <  1:662731/222‑1 (MQ=255)                                                                                                                       cGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACata                                                                             >  1:415366/1‑198 (MQ=255)                                                                                                                         gAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTGATAGTAATACATATAAACGCAAGTATTTTAAAg                                         <  1:517234/232‑1 (MQ=255)                                                                                                                                             gCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTGATAg                                                                      >  1:487426/1‑183 (MQ=255)                                                                                                                                             gCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTGATAGTAATACATATAAACGc                                                      >  1:254239/1‑199 (MQ=255)                                                                                                                                              cATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTGATAGTAATACATATAAACGCAAGTATTTTAAAGTATATTTCATCCCACAGGAGACTGACTTTAATACCaaaa  <  1:181780/250‑1 (MQ=255)                                                                                                                                                     gtgtTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTGATAGTAATACata                                                             >  1:391577/1‑184 (MQ=255)                                                                                                                                                         ttGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGAt                                                                                                                                  >  1:210400/1‑111 (MQ=255)                                                                                                                                                           gTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTGAt                                                                        >  1:126841/1‑167 (MQ=255)                                                                                                                                                                   gAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGaa                                                                                            >  1:86049/1‑139 (MQ=255)                                                                                                                                                                    aaGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTGATAGTAATACat                                                              <  1:821526/168‑1 (MQ=255)                                                                                                                                                                    aaGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTGATAGTAATACat                                                              >  1:838824/1‑168 (MQ=255)                                                                                                                                                                         gAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAg                                                                                              <  1:610428/131‑1 (MQ=255)                                                                                                                                                                              gTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTGAt                                                                        <  1:88873/148‑1 (MQ=255)                                                                                                                                                                                   aaTCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAg                                                                                              >  1:432755/1‑121 (MQ=255)                                                                                                                                                                                                         tAAATTACGAAAGCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAg                                                                                                                           >  1:749654/1‑70 (MQ=255)                                                                                                                                                                                                                     gCCTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTGATAGTAATACAtata                                                           <  1:145603/122‑1 (MQ=255)                                                                                                                                                                                                                       cTTATCAAGAAAGTGAAACTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTcac                                                                                <  1:337244/99‑1 (MQ=255)                                                                                                                                                                                                                                      aaaCTACATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACatat                                                                            >  1:490248/1‑88 (MQ=255)                                                                                                                                                                                                                                            |                                                                                                                                                            AGACTGGTTGAAGCCTATTTAGATGCAAAGAAAACCTTATCAGATGACGACTTTATGAGGCTACCTCTTAAGGTGGCTGATTCAAATGTGAAATACTTATACCAATATTTTCGCAGGACGGAAAAAGCGATCAGAGATAAGCATAAATGTGTTTGTATTGGTGAAGTAGAACTGTTTGAATCTGAGGATTGGTTATATTTTAAATTACGAAAGCCTTATCAAGAAAGTGAAACTATATCACCAATTCCTATCTGCTTAGGGATTAAAAAGACGACTTTGGAAACGTACCATTATCGTAGAATGCTTCGTTCACATATTGATAGTAATACATATAAACGCAAGTATTTTAAAGTATATTTCATCCCACAGGAGACTGACTTTAATACCAAAA  >  1/1040142‑1040532

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑