Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,000,237 G→A intergenic (+50030/+2761) unknown → / ← unknown tRNA‑Leu‑CAG/tRNA‑Lys‑TTT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,000,2370GA100.0% 213.5 / NA 63intergenic (+50030/+2761)unknown/unknowntRNA‑Leu‑CAG/tRNA‑Lys‑TTT
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (37/26);  total (37/26)

GATGTATTTTTTACAGTGCATGCTTTGGCCACAGGTGGTTCTGATGCGGTAAGTTTAATTCGTAA‑TATCTTCACTACTTTTACCTCATCACCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCGGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGCACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATACTATGAAAAAATATTTATTGAGCTTCTTATTAAGCATGATATTGACTTTGACGAGTCATGCAG  >  1/1000002‑1000465
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                    
gATGTATTTTTTACAGTGCATGCTTTGGCCACAGGTGGTTCTGATGCGGTAAGTTTAATTCGTAA‑TATCTTCACTACTTTTACCTCATCACCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATAtttt                                                                                                                                                                                                                       >  1:596579/1‑251 (MQ=255)
gATGTATTTTTTACAGTGCATGCTTTGGCCACAGGTGGTTCTGATGCGGTAAGTTTAATTCGTAA‑TATCTTCACTACTTTTACCTCATCACCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATAtttt                                                                                                                                                                                                                       >  1:60340/1‑251 (MQ=255)
     aTTTTTTACAGTGCATGCTTTGGCCACAGGTGGTTCTGATGCGGTAAGTTTAATTCGTAA‑TATCTTCACTACTTTTACCTCATCCCCATCATCCCCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGAt                                                                                                                                                                                                                   <  1:592187/250‑1 (MQ=255)
     aTTTTTTACAGTGCATGCTTTGGCCACAGGTGGTTCTGATGCGGTAAGTTTAATTCGTAA‑TATCTTCACTACTTTTACCTCATCACCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGAt                                                                                                                                                                                                                   >  1:187664/1‑250 (MQ=255)
     aTTTTTTACAGTGCATGCTTTGGCCACAGGTGGTTCTGATGCGGTAAGTTTAATTCGTAA‑TATCTTCACTACTTTTACCTCATCACCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGAt                                                                                                                                                                                                                   >  1:814146/1‑250 (MQ=255)
     aTTTTTTACAGTGCATGCTTTGGCCACAGGTGGTTCTGATGCGGTAAGTTTAATTCGTAA‑TATCTTCACTACTTTTACCTCATCACCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTCTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGAtt                                                                                                                                                                                                                  >  1:124235/1‑251 (MQ=255)
               gTGCATGCTTTGGCCACAGGTGGTTCTGATGCGGTAAGTTTAATTCGTAA‑TATCTTCACTACTTTTACCTCATCACCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGAt                                                                                                                                                                                                                   >  1:650135/1‑240 (MQ=255)
               gTGCATGCTTTGGCCACAGGTGGTTCTGATGCGGTAAGTTTAATTCGTAA‑TATCTTCACTACTTTTACCTCATCACCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGAtttt                                                                                                                                                                                                        >  1:190089/1‑251 (MQ=255)
                   ttGCTTTGGCCCCAGGTGGTTCTGATGCGTTAAGTTTAATTC‑TAATTTTTTTCACTTTTTTTACCTAATCACCATCATCACCGAAAAGACGAGAATATAGGTGGATGGTTGTTGTTGTTTTCAAT‑CGTGCGCCGTTTAATATGGAAGCTGCATTAAGCCAGTAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACAt                                                                                                                                                                                                    <  1:207768/250‑1 (MQ=255)
                      cTTTGGCCACAGGTGGTTCTGATGCGGTAAGTTTAATTCGTAA‑TATCTTCACTACTTTTACCTCATCACCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACAt                                                                                                                                                                                                    >  1:494902/1‑248 (MQ=255)
                                 ggtggtTCTGATGCGGTAAGTTTAATTCGTAA‑TATCTTCACTACTTTTACCTCATCACCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTAc                                                                                                                                                                                       >  1:283267/1‑250 (MQ=255)
                                     gtTCTGATGCGGTAAGTTTAATTCGTAA‑TATCTTCACTACTTTTCCCTCATCGCCATCATCACCGGAAAGGCGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAGGCTGCATTAAGACAGGAGCCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTaa                                                                                                                                                                                                                             <  1:895712/208‑1 (MQ=255)
                                     gtTCTGATGCGGTAAGTTTAATTCGTAA‑TATCTTCACTACTTTTACCTCATCACCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGAt                                                                                                                                                                                                                   >  1:46926/1‑218 (MQ=255)
                                             gCGGTAAGTTTAATTCGTAA‑TATCTTCACTACTTTTACCTCATCACCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTcc                                                                                                                                                                                                                                  >  1:502874/1‑195 (MQ=255)
                                                                  tatCTTCCCTACTTTTACCTCATCACCATCATCACCGGAAAGACGAGGATATAGCTGGATGTTTGTTGGTGATTTCAAT‑CGTGCGCCGTTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGgcg                                                                                                                                                      <  1:674245/251‑1 (MQ=255)
                                                                       tCACTACTTTTACCTCATCCCCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGagc                                                                                                                                                                           <  1:276182/225‑1 (MQ=255)
                                                                            actTTTACCTCATCACCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAAc                                                                                                                                                               >  1:490870/1‑232 (MQ=255)
                                                                            actTTTACCTCATCACCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAAt                                                                                                                                            >  1:638940/1‑251 (MQ=255)
                                                                             ctTTTACCTCATCCCAATCATCACCGGAAAGACGAGTATATAGCGGGATGGTTGTTGGTGA‑TTAAATGGGTGCGCGGTTTAATCTGGAAGCGGCATTAAGAGAGGACCCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATg                                                                                                                                           <  1:661379/251‑1 (MQ=255)
                                                                                   ccTCATCACCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAAt                                                                                                                                     >  1:8602/1‑251 (MQ=255)
                                                                                    cTCATCCCCATCATCCCCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCGGGAAGCTGCATTAAGACAGGACCCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATc                                                                                                                                    <  1:264554/251‑1 (MQ=255)
                                                                                      catcaCCATCATCACCGGAAAGACGGGGATATAGCTGGATGGTTGTTGGTGTTTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCgg                                                                                                                                                        <  1:291138/229‑1 (MQ=255)
                                                                                        tcaCCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGAt                                                                                                                                                                                                                   >  1:660029/1‑168 (MQ=255)
                                                                                                               aGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGTTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCa                                                                                                                                                                                     <  1:521892/175‑1 (MQ=255)
                                                                                                                        cTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGACCCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTcc                                                                                                  <  1:424554/249‑1 (MQ=255)
                                                                                                                        cTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTc                                                                                                   >  1:138165/1‑248 (MQ=255)
                                                                                                                               gttgttGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTcc                                                                                                                                                                                                                                  >  1:95357/1‑114 (MQ=255)
                                                                                                                               gttgttGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCa                                                                                                                                                                                     >  1:110374/1‑159 (MQ=255)
                                                                                                                               gttgttGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATc                                                                                                              >  1:557481/1‑230 (MQ=255)
                                                                                                                               gttgttGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATc                                                                                                         >  1:37764/1‑235 (MQ=255)
                                                                                                                                ttgttgGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGtttt                                                                                        >  1:250635/1‑251 (MQ=255)
                                                                                                                                        gATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTGATGTTAAATCAGTTACGCTCACAAATTa                                                                                                                  <  1:680959/217‑1 (MQ=255)
                                                                                                                                        gATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATc                                                                                                              >  1:633385/1‑221 (MQ=255)
                                                                                                                                          tttCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCa                                                                                                                                                                                     >  1:494787/1‑148 (MQ=255)
                                                                                                                                          tttCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTc                                                                                                   >  1:790580/1‑230 (MQ=255)
                                                                                                                                          tttCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGAt                                                                               >  1:2610/1‑250 (MQ=255)
                                                                                                                                                  cGTGCGCCGGTTAATTTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAgg                                                                       <  1:388958/251‑1 (MQ=255)
                                                                                                                                                              aaTCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATAc                                                                >  1:714843/1‑246 (MQ=255)
                                                                                                                                                                tCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAgg                                                                       >  1:134179/1‑237 (MQ=255)
                                                                                                                                                                     aaGCTGCATAAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATAc                                                                <  1:653153/239‑1 (MQ=255)
                                                                                                                                                                          gCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGc                                                                                                                                                                                               >  1:219174/1‑107 (MQ=255)
                                                                                                                                                                          gCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACg                                                                                                                                                                    <  1:469704/134‑1 (MQ=255)
                                                                                                                                                                          gCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAgg                                                                       >  1:786580/1‑227 (MQ=255)
                                                                                                                                                                          gCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATACTATGAAAAAAtatttat                                               >  1:877840/1‑251 (MQ=255)
                                                                                                                                                                          gCATAAAGACAGGACCCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGc                                                                                                                                                                                                              <  1:698492/92‑1 (MQ=255)
                                                                                                                                                                              tAAGACAGGACCCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTcc                                                                                                                                                                                                                                  <  1:284476/68‑1 (MQ=255)
                                                                                                                                                                               aaaaCAGAAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATACTATGAAAAAATATTTATTGAGc                                          <  1:805043/248‑1 (MQ=255)
                                                                                                                                                                                                   gtgaAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATAc                                                                <  1:603061/209‑1 (MQ=255)
                                                                                                                                                                                                   gtgaAAATACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATACTATGAAAAAATATTTATTGAGCTTCttat                                   >  1:726212/1‑238 (MQ=255)
                                                                                                                                                                                                      aaaaTACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATACTATGAAAAAATATTTATTGAGCTTCTTATTAAGCATGATATTGAc                   <  1:675577/251‑1 (MQ=255)
                                                                                                                                                                                                       aaaTACAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATACTATGAAAAAATATTTATTGAGCTTCTTATTAAGCATGATATTGACt                  <  1:786329/251‑1 (MQ=255)
                                                                                                                                                                                                           aCAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATACTATGAAAAAATATTTATTGAGCTTCTTATTAAGCATGATATTGACTTTGa              >  1:734839/1‑251 (MQ=255)
                                                                                                                                                                                                            cAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACAt                                                                                                                                                                                                    <  1:867412/68‑1 (MQ=255)
                                                                                                                                                                                                            cAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGAt                                                                               >  1:590612/1‑185 (MQ=255)
                                                                                                                                                                                                            cAATTATTATTGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATACTATGAAAAAATATTTATTGAGCTTCTTATTAAGCATGATATTGACTTTGa              >  1:314128/1‑250 (MQ=255)
                                                                                                                                                                                                               ttattattGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGa                                                                                                                                                                 <  1:274927/100‑1 (MQ=255)
                                                                                                                                                                                                                     ttGCGCCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATACTATGAAAAAATATTTATTGAGCTTCTTATTAAGCATGATATTGACTTTGACGAGTCATGc    <  1:788196/251‑1 (MQ=255)
                                                                                                                                                                                                                        cgcCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGgag                                                                     >  1:663984/1‑183 (MQ=255)
                                                                                                                                                                                                                        cgcCAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATACTATGAAAAAATATTTATTGAGCTTCTTATTAAGCATGATATTGACTTTGACGAGTCATGCAg  <  1:473599/250‑1 (MQ=255)
                                                                                                                                                                                                                           cAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATAc                                                                <  1:533408/185‑1 (MQ=255)
                                                                                                                                                                                                                           cAACAGAACCGACTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATACTATGAAAAAATATTTATTGAGCTTCTTATTAAGCATGATATTGACt                  >  1:178543/1‑231 (MQ=255)
                                                                                                                                                                                                                                      aCTCATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATAc                                                                <  1:557282/174‑1 (MQ=255)
                                                                                                                                                                                                                                         cATCAGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGTACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATAc                                                                >  1:744642/1‑171 (MQ=255)
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                    
GATGTATTTTTTACAGTGCATGCTTTGGCCACAGGTGGTTCTGATGCGGTAAGTTTAATTCGTAA‑TATCTTCACTACTTTTACCTCATCACCATCATCACCGGAAAGACGAGGATATAGCTGGATGGTTGTTGGTGATTTCAAT‑CGTGCGCCGGTTAATCTGGAAGCTGCATTAAGACAGGAACCCGCCGTGAGTGAAAATACAATTATTATTGCGCCAACAGAACCGACTCATCGGTCCGGTAATATTTTAGATTATGCGATTTTACATGACGCACATTTACCACGTCGAGAGCAAGCACGTGAACGTATCGGCGCAAGTTTAATGTTAAATCAGTTACGCTCACAAATTACATCCGATCATTTTCCTGTTAGTTTTGTTCATGATCGCTAAGGAGAATACTATGAAAAAATATTTATTGAGCTTCTTATTAAGCATGATATTGACTTTGACGAGTCATGCAG  >  1/1000002‑1000465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑