Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	11,294	T→C	intergenic (–/+122650)	– / ← unknown	–/tRNA‑Ala‑GGC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	11,294	0	T	C	100.0%	243.7 / NA	73	intergenic (–/+122650)	–/unknown	–/tRNA‑Ala‑GGC
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (35/38);  total (35/38)

TCGTTTCATGGCTGCATTAACCGATTAAGTTGAGGTACAAACGTATTTTGCCAGGTTTCACGATCCAATAAACCCGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGTGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGACTTATCAATTAAAGCGGAGGCAATTTTTTTCGGATCCTGATGCAACCCCGCCA  >  1/11067‑11538                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                     tCGTTTCATGGCTGCATTAACCGATTAAGTTGAGGTACAAACGTATTTTGCCAGGTTTCACGATCCAATAAACCCGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGcc                                                                                                                                                                                                                               <  1:307595/251‑1 (MQ=255)            cTGCATTAACCGATTAAGTTGAGGTACAAACGTATTTTGCCAGGTTTCACGATCCAATAAACCCGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCa                                                                                                                                                                                                                    <  1:849745/251‑1 (MQ=255)              gCATTAACCGATTAAGTTGAGGTACAAACGTATTTTGCCAGGTTTCACGATCCAATAAACCCGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCAtt                                                                                                                                                                                                                  >  1:502296/1‑251 (MQ=255)                 ttAACCGATTAAGTTGAGGTACAAACGTATTTTGCCAGGTTTCACGATCCAATAAACCCGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGATAATAGGCATTTcc                                                                                                                                                                                                               <  1:534888/251‑1 (MQ=255)                        aTTAAGTTGAGGTACAAACGTATTTTGCCAGGTTTCACGATCCAATAAACCCGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGa                                                                                                                                                                                                                                          >  1:468548/1‑217 (MQ=255)                        aTTAAGTTGAGGTACAAACGTATTTTGCCAGGTTTCACGATCCAATAAACCCGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCg                                                                                                                                                                                                                              <  1:858512/229‑1 (MQ=255)                           aaGTTGAGGTACAAACGTATTTTGCCAGGTTTCACGATCCAATAAACCCGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTc                                                                                                                                                                                                                >  1:747485/1‑240 (MQ=255)                                  ggTACAAACGTATTTTGCCAGGTTTCACGATCCAATAAACCCGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATcaa                                                                                                                                                                                              >  1:416326/1‑251 (MQ=255)                                   gTACAAACGTATTTTGCCAGGTTTCACGATCCAATAAACCCGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGc                                                                                                                                                                                                          >  1:532535/1‑238 (MQ=255)                                            tATTTTGCCAGGTTTCACGATCCAATAAACCCGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAgg                                                                                                                                                                                                                      >  1:888655/1‑217 (MQ=255)                                                            aCGATCCAATAAACCCGAATGACGGTAACGAATAATGCCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAAc                                                                                                                                                                    <  1:66852/251‑1 (MQ=255)                                                               aTCCAATAAACCCGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTc                                                                                                                                                                                                    >  1:660650/1‑216 (MQ=255)                                                               aTCCAATAAACCCGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCg                                                                                                                                                                  >  1:102348/1‑250 (MQ=255)                                                                 ccAATAAACCCGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGc                                                                                                                                                                                                                     >  1:122361/1‑197 (MQ=255)                                                                  cAATAAACCCGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCAc                                                                                                                                                               >  1:712214/1‑250 (MQ=255)                                                                       aaCCCGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCaa                                                                                                                                                            >  1:271508/1‑248 (MQ=255)                                                                          ccGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGccc                                                                                                                                                      <  1:219493/251‑1 (MQ=255)                                                                           cGAATGACGGTAACAAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGcccc                                                                                                                                                     <  1:400364/251‑1 (MQ=255)                                                                            gAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTcc                                                                                                                                                                                 <  1:252558/222‑1 (MQ=255)                                                                               tGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAat                                                                                                                                                 <  1:345933/251‑1 (MQ=255)                                                                                 aCGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAata                                                                                                                                                <  1:584396/250‑1 (MQ=255)                                                                                 aCGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAata                                                                                                                                                <  1:152335/250‑1 (MQ=255)                                                                                    gTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCAc                                                                                                                                                                                                                                  >  1:252469/1‑165 (MQ=255)                                                                                    gTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATAttt                                                                                                                                             <  1:198309/250‑1 (MQ=255)                                                                                    gTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTa                                                                                                                                            >  1:190811/1‑251 (MQ=255)                                                                                      aaCGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATc                                                                                                                                          <  1:459261/251‑1 (MQ=255)                                                                                      aaCGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATc                                                                                                                                          <  1:99660/251‑1 (MQ=255)                                                                                         gAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGa                                                                                                                                       >  1:563187/1‑251 (MQ=255)                                                                                                              cTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAgg                                                                                                                                                                                                                      >  1:310647/1‑151 (MQ=255)                                                                                                              cTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCAtt                                                                                                                                                                                                                  <  1:843457/155‑1 (MQ=255)                                                                                                              cTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATc                                                                                                                   >  1:637233/1‑250 (MQ=255)                                                                                                              cTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATc                                                                                                                   >  1:13548/1‑250 (MQ=255)                                                                                                                      gTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGc                                                                                                           <  1:634656/250‑1 (MQ=255)                                                                                                                          ccGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGc                                                                                                      <  1:340257/251‑1 (MQ=255)                                                                                                                             gcgcgcCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTCGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGt                                                                                                    <  1:451121/250‑1 (MQ=255)                                                                                                                                    aTCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGcc                                                                                                                                                                                                                               >  1:883989/1‑120 (MQ=255)                                                                                                                                    aTCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGc                                                                                               <  1:647943/248‑1 (MQ=255)                                                                                                                                    aTCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGt                                                                                            >  1:709769/1‑251 (MQ=255)                                                                                                                                     tCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTg                                                                                                                                                                               <  1:257904/167‑1 (MQ=255)                                                                                                                                     tCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGtt                                                                                           >  1:690128/1‑251 (MQ=255)                                                                                                                                          gCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATcc                                                                                                                                                                                                                                    >  1:110850/1‑109 (MQ=255)                                                                                                                                               gCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCa                                                                                                                                                                         >  1:335576/1‑163 (MQ=255)                                                                                                                                                cTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAggg                                                                                                                                  >  1:384131/1‑201 (MQ=255)                                                                                                                                                cTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAAt                                                                                >  1:350598/1‑251 (MQ=255)                                                                                                                                                 ttcgaCGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGa                                                                                                                                       >  1:421305/5‑195 (MQ=255)                                                                                                                                                 ttCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAAtt                                                                               <  1:312396/251‑1 (MQ=255)                                                                                                                                                      cGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAg                                                                                                       <  1:788569/222‑1 (MQ=255)                                                                                                                                                                     aCTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTcc                                                                                                                                                                                                               >  1:195182/1‑103 (MQ=255)                                                                                                                                                                     aCTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGca                                                           >  1:828795/1‑251 (MQ=255)                                                                                                                                                                        gTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGc                                                                                                           <  1:584060/200‑1 (MQ=255)                                                                                                                                                                        gTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAg                                                        >  1:250461/1‑251 (MQ=255)                                                                                                                                                                            tcaatcaCTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAATTATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGACtt                                                    >  1:358301/1‑251 (MQ=255)                                                                                                                                                                                tcaCTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGACTTATCa                                                <  1:665264/251‑1 (MQ=255)                                                                                                                                                                                tcaCTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGACTTATCa                                                <  1:833882/251‑1 (MQ=255)                                                                                                                                                                                tcaCTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGACTTATCa                                                <  1:306207/251‑1 (MQ=255)                                                                                                                                                                                tcaCTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGACTTATCa                                                <  1:900483/251‑1 (MQ=255)                                                                                                                                                                                 caCTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGAc                                                      >  1:693344/1‑244 (MQ=255)                                                                                                                                                                                       cGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGcc                                                                           >  1:695161/1‑217 (MQ=255)                                                                                                                                                                                       cGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGACTTATCa                                                <  1:209219/244‑1 (MQ=255)                                                                                                                                                                                       cGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGACTTATCAATTAAAg                                         <  1:275596/251‑1 (MQ=255)                                                                                                                                                                                         cATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAAGTCGCCTGATAAAATTCCGGCACAGACTTATCAATTAAAGCg                                       <  1:319827/251‑1 (MQ=255)                                                                                                                                                                                             aGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGc                                                                                               <  1:161448/191‑1 (MQ=255)                                                                                                                                                                                              ggATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGACTTATCaa                                               <  1:786132/238‑1 (MQ=255)                                                                                                                                                                                                    cccATCCGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGACTTATCa                                                <  1:468481/231‑1 (MQ=255)                                                                                                                                                                                                         ccGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGccc                                                                                                                                                      <  1:509653/124‑1 (MQ=255)                                                                                                                                                                                                         ccGTTGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGc                                                                                                           <  1:620825/167‑1 (MQ=255)                                                                                                                                                                                                            ttGCAGCATTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGACTTATCAATTAAAGCGGAGGCAATTTTTTTCGGAt                    >  1:32842/1‑251 (MQ=255)                                                                                                                                                                                                               cagcaTTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGACTTATCaa                                               <  1:691856/221‑1 (MQ=255)                                                                                                                                                                                                                  caTTTCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGACTTATCAATTAAAGCGGAGGCAATTTTTTTCGGATCCTGAt              >  1:163638/1‑251 (MQ=255)                                                                                                                                                                                                                   aTTTCAATGCCGTTTCGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGACTTATCAATTAAAGCGGAGGCAATTTTTTTCGGATCCTGATg             <  1:494375/251‑1 (MQ=255)                                                                                                                                                                                                                    tttCAATGCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGc                                                                                                           <  1:751676/156‑1 (MQ=255)                                                                                                                                                                                                                           gCCGTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGACTTATCAATTAAAGCGGAGGCAATTTTTTTCGGATCCTGATGCAACCCCg     >  1:7321/1‑251 (MQ=255)                                                                                                                                                                                                                              gTTTTGCGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGACTTATCAATTAAAGCGGAGGCAATTTTTTTCGGATCCTGATGCAACCCCGCca  >  1:12385/1‑251 (MQ=255)                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                     TCGTTTCATGGCTGCATTAACCGATTAAGTTGAGGTACAAACGTATTTTGCCAGGTTTCACGATCCAATAAACCCGAATGACGGTAACGAATAATACCGTCGGCGTCCACTAAATAGGTTTCCGGCGCGCCATCTACGCCCAGCTTCAACGCCAGCTCGCCACGACTGTCATCAATCACTAACGCATAAGGATTACCCATCCGTTGCAGCATTTCAATGCCGTTTTGTGGTTTATCGCGATAATCCACGCCGACAATAGGCATTTCCTGTGCCAATTCCATCAACAACGGATGTTCCTGTTGGCAATAACCGCACCAACTGCCCCAAATATTTATCAGAAAGGGACGTTTCGGAAAATCCTTGGGGCTGAGCGTTTGGCGGTTATCCAGCAAATTCGCCTGATAAAATTCCGGCACAGACTTATCAATTAAAGCGGAGGCAATTTTTTTCGGATCCTGATGCAACCCCGCCA  >  1/11067‑11538

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑