Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	780,260	C→T	intergenic (+45387/+41573)	unknown → / ← unknown	tRNA‑Asn‑GTT/tRNA‑Thr‑GGT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	780,260	0	C	T	100.0%	164.9 / NA	49	intergenic (+45387/+41573)	unknown/unknown	tRNA‑Asn‑GTT/tRNA‑Thr‑GGT
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (27/22);  total (27/22)

TGGTGCGCCACGTATTGAAAAAGCCATGACCGATTCGATTAAACTTGCCGATTACATTCTGATTCCACTGAAACCATCACAATTTGATATTTGGGCATGCAAAGATTCAATTGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCCGGGTTAGTCATCAGTCAAACGAATAAGAAGACAAATTTAGCTAAAGAAGTTATTTCGTTTATCAACGAAAACTTTGAAATACCGTTATTAAAGGGTAGTACGGCGGTACGCGTCAGCTATGCAGAAGTCTTAAGTTCCGGTAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGCACTAGGAGTTCAATATGAGTAAATTAACAAAAGGTACACTAAGCAAATCCGGGCTTTCTATGGGTAGCATTGAAAAAACGGCTA  >  1/780041‑780496                                                                                                                                                                                                                            |                                                                                                                                                                                                                                             tggagctccccgcaTTGAAAAAGCCATGACCGATTCGATTAAACTTGCCGATTACATTCTGATCCCACTGAAACCATCACAATTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGttattagaag                                                                                                                                                                                                               <  1:454616/238‑5 (MQ=255)   gagctccccgcaTTGAAAAAGCCATGACCGATTCGATTAAACTTGCCGATTACATTCTGATCCCACTGAAACCATCACAATTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACtt                                                                                                                                                                                                                                   >  1:487132/12‑229 (MQ=255)    agctccccgcaTTGAAAAAGCCATGACCGATTCGATTAAACTTGCCGATTACATTCTGATCCCACTGAAACCATCACAATTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGttattagaaggc                                                                                                                                                                                                             <  1:756345/240‑7 (MQ=255)       tccccgcaTTGAAAAAGCCATGACCGATTCGATTAAACTTGCCGATTACATTCTGATCCCACTGAAACCATCACAATTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGaaa                                                                                                                                                                                                                              <  1:79786/223‑1 (MQ=255)        ccccgcaTTGAAAAAGCCATGACCGATTCGATTAAACTTGCCGATTACATTCTGATCCCACTGAAACCATCACAATTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGttattagaaggcagtac                                                                                                                                                                                                        <  1:423631/245‑12 (MQ=255)        ccccgcaTTGAAAAAGCCATGACCGATTCGATTAAACTTGCCGATTACATTCTGATCCCACTGAAACCATCACAATTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGttattagaaggcagtac                                                                                                                                                                                                        <  1:806558/245‑12 (MQ=255)                       gCCATGACCGATTCGATTAAACTTGCCGATTACATTCTGATCCCACTGAAACCATCACAATTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAg                                                                                                                                                                                         >  1:227459/1‑251 (MQ=255)                          aTGACCGATTCGATTAAACTTGCCGATTACATTCTGATCCCACTGAAACCATCACAATTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTa                                                                                                                                                                                      <  1:542422/251‑1 (MQ=255)                          aTGACCGATTCGATTAAACTTGCCGATTACATTCTGATCCCACTGAAACCATCACAATTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTa                                                                                                                                                                                      <  1:480745/251‑1 (MQ=255)                           tGACCGATTCGATTAAACTTGCCGATTACATTCTGATCCCACTGAAACCATCACAATTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGttattagaaggc                                                                                                                                                                                                             >  1:675372/1‑221 (MQ=255)                                     gattAAACTTGCCGATTACATTCTGATCCCACTGAAACCATCACAATTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCt                                                                                                                                                                                       >  1:397924/1‑239 (MQ=255)                                          aaCTTGCCGATTACATTCTGATCCCACTGAAACCATCACAATTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGttattagaaggcagtacaacgg                                                                                                                                                                                                   <  1:735347/222‑17 (MQ=255)                                            cTTGCCGATTACATTCTGATCCCACTGAAACCATCACAATTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAgctc                                                                                                                                                                    <  1:85244/251‑4 (MQ=255)                                                           cTGATCCCACTGAAACCATCACAATTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGtttt                                                                                                                                                     >  1:177639/1‑251 (MQ=255)                                                                        aaCCATCACAATTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGttattagaaggc                                                                                                                                                                                                             >  1:291841/1‑176 (MQ=255)                                                                             tCACAATTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAaaga                                                                                                                                   <  1:590249/251‑1 (MQ=255)                                                                             tCACAATTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAaaga                                                                                                                                   <  1:683301/251‑1 (MQ=255)                                                                                  aTTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGttattagaaagc                                                                                                                                                                                                             >  1:437352/1‑166 (MQ=255)                                                                                  aTTTGATATTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAAGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGa                                                                                                                              >  1:425982/1‑251 (MQ=255)                                                                                       atatTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGc                                                                                                                          <  1:546383/250‑1 (MQ=255)                                                                                       atatTTGGGCATGCAAAGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCa                                                                                                                         >  1:404339/1‑251 (MQ=255)                                                                                                       aGATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAaaga                                                                                                                                   >  1:49132/1‑225 (MQ=255)                                                                                                        gattcgatagcgCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTaatcaaatca                                                                                                         >  1:740660/12‑250 (MQ=255)                                                                                                        gATTCGATAGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAgc                                                                                                                                                                      >  1:33978/1‑188 (MQ=255)                                                                                                            cgatagAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAaaga                                                                                                                                   <  1:242778/215‑1 (MQ=255)                                                                                                                 gAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAAt                                                                                               >  1:237924/1‑251 (MQ=255)                                                                                                                      ggTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCg                                                                                                                               <  1:662222/214‑1 (MQ=255)                                                                                                                        tGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAAc                                                                                         <  1:8772/250‑1 (MQ=255)                                                                                                                             gCACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAgc                                                                                                                                                                      <  1:620220/168‑2 (MQ=255)                                                                                                                              cACGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTa                                                                                  <  1:525285/251‑1 (MQ=255)                                                                                                                                cGTATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTAgg                                                                                >  1:200031/1‑251 (MQ=255)                                                                                                                                  tATGCAAATTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTAGGa                                                                               <  1:96834/250‑1 (MQ=255)                                                                                                                                       aaaTTAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTAGGAGTTCaa                                                                         >  1:47557/1‑251 (MQ=255)                                                                                                                                          ttAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAAGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTAGGAGTTCAatat                                                                      <  1:299934/251‑1 (MQ=255)                                                                                                                                          ttAATGATAAGCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTAGTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTAGGAGTTCAatat                                                                      <  1:430768/251‑1 (MQ=255)                                                                                                                                                    gCTCAAAGCGGGTTTAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTAGGa                                                                               >  1:530502/1‑232 (MQ=255)                                                                                                                                                              ggtttAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAaaga                                                                                                                                   >  1:351420/4‑170 (MQ=255)                                                                                                                                                              ggtttAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTAGGAGTTCAATATGAGTAAATTAACAAAAggca                                                  >  1:703895/4‑249 (MQ=255)                                                                                                                                                              ggtttAGTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTAGGAGTTCAATATGAGTAAATTAACAAAAggca                                                  >  1:50307/4‑249 (MQ=255)                                                                                                                                                                    gTCATCAGTCAAACAAATAAACAAACCAATTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTAGGAGTTCAATATGAGTAAATTAACAAAAGGCACACTaa                                            >  1:674597/1‑251 (MQ=255)                                                                                                                                                                            tcaaacaaataaacaaaccaaTTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTAGGAGTTCAATATGAGTAAATTAACAAAAGGCACACTAAGCAAATcc                                    <  1:335871/232‑1 (MQ=255)                                                                                                                                                                                 caaataaacaaaccaaTTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTAgg                                                                                >  1:471212/15‑202 (MQ=255)                                                                                                                                                                                 caaataaacaaaccaaTTTAGCAAAAGATGTTATTGAGTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTAGGAGTTCAATATGAGTAAATTAACAAAAGGCACACTAAGCAAATCCggg                                 >  1:334441/15‑249 (MQ=255)                                                                                                                                                                                                          agatgttattgagTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAaaga                                                                                                                                   >  1:381207/13‑126 (MQ=255)                                                                                                                                                                                                            atgttattgagTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTAGGAg                                                                              >  1:587947/11‑177 (MQ=255)                                                                                                                                                                                                            atgttattgagTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTAGGAGTTCAATATGAGTAAATTAACAAAAGGCACACTAAGCAAATCCGGGCTTTCTATGGGTAGCATTGAAAAAAcag     >  1:666918/11‑248 (MQ=255)                                                                                                                                                                                                            atgttattgagTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTAGGAGTTCAATATGAGTAAATTAACAAAAGGCACACTAAGCAAATCCGGGCTTTCTATGGGTAGCATTGAAAAAAcag     >  1:508724/11‑248 (MQ=255)                                                                                                                                                                                                            atgttattgagTTTATTAAAGATAACTTTGAAATTCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGGATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTAGGAGTTCAATATGAGTAAATTAACAAAAGGCACACTAAGCAAATCCGGGCTTTCTATGGGTAGCATTGAAAAAAcagc    <  1:438021/241‑4 (MQ=255)                                                                                                                                                                                                              gttattgagTTTATTAAAGATAACTTTGAAATCCCGTTATTAGAAGGCAGTACAACGGTTCGCGTCAGCTATGCCGAAGTATTAAGCTCCGGCAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGTACTAGGAGTTCAATATGAGTAAATTAACAAAAGGCACACTAAGCAAATCCGGGCTTTCTATGGGTAGCATTGAAAAAACAGCTa  >  1:551538/9‑251 (MQ=255)                                                                                                                                                                                                                            |                                                                                                                                                                                                                                             TGGTGCGCCACGTATTGAAAAAGCCATGACCGATTCGATTAAACTTGCCGATTACATTCTGATTCCACTGAAACCATCACAATTTGATATTTGGGCATGCAAAGATTCAATTGAGCTGGTGCAAGCACGTATGCAAATTAATGATAAGCTCAAAGCCGGGTTAGTCATCAGTCAAACGAATAAGAAGACAAATTTAGCTAAAGAAGTTATTTCGTTTATCAACGAAAACTTTGAAATACCGTTATTAAAGGGTAGTACGGCGGTACGCGTCAGCTATGCAGAAGTCTTAAGTTCCGGTAATACGGTTTTTGAAAGTCAGTCTAAAGAAGCGAAAGCAGAGATTAATCAAATCACAAATGAAATTTTAACTGCACTAGGAGTTCAATATGAGTAAATTAACAAAAGGTACACTAAGCAAATCCGGGCTTTCTATGGGTAGCATTGAAAAAACGGCTA  >  1/780041‑780496

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑