New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 1 732073 =79 (0.900)6 (0.070) 5/410 6.1 6.1% intergenic (+19055/‑2645) unknown/unknown tRNA‑Arg‑TCT/tRNA‑Phe‑GAA
?1 732416 = 111 (1.330)intergenic (+19398/‑2302) unknown/unknown tRNA‑Arg‑TCT/tRNA‑Phe‑GAA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTTTGAAATTGTTGTGTGCGGAAAATTTTAGCGGCTGATTATAGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGCCAATGCGCCTTTGGACGAAGTGTTGCATTTGTGGACGGGCTTGGGCTATTACGCGCGGGCGCGCAATTTG  >  1/731824‑732316
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                   
cTTTGAAATTGTTGTGTGCGGAAAATTTTAGCGGCTGATTATAGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACg                                                                                                                                                                                                                                                    >  1:894671/1‑251 (MQ=255)
 tttGAAATTGTTGTGTGCGGAAAATTTTAGCGGCTGATTATAGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGc                                                                                                                                                                                                                                                   <  1:183028/251‑1 (MQ=255)
 tttGAAATTGTTGTGTGCGGAAAATTTTAGCGGCTGATTATAGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGc                                                                                                                                                                                                                                                   <  1:431793/251‑1 (MQ=255)
       aTTGTTGTGTGCGGAAAATTTTAGCGGCTGATTATAGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCt                                                                                                                                                                                                                                             <  1:820305/251‑1 (MQ=255)
           ttgtGTGCGGAAAATTTTAGCGGCTGATTATAGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACg                                                                                                                                                                                                                                         <  1:808125/251‑1 (MQ=255)
           ttgtGTGCGGAAAATTTTAGCGGCTGATTATAGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACg                                                                                                                                                                                                                                         <  1:823721/251‑1 (MQ=255)
           ttgtGTGCGGAAAATTTTAGCGGCTGATTATAGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACg                                                                                                                                                                                                                                         <  1:262286/251‑1 (MQ=255)
                tgCGGAAAATTTTAGCGGCTGATTATAGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTa                                                                                                                                                                                                                                    <  1:351662/251‑1 (MQ=255)
                     aaaaTTTTAGCGGCTGATTATAGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGcc                                                                                                                                                                                                                                <  1:526738/250‑1 (MQ=255)
                     aaaaTTTTAGCGGCTGATTATAGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCa                                                                                                                                                                                                                               <  1:484018/251‑1 (MQ=255)
                        gagatgtgtctaagagccaGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAg                                                                                                                                                                                                                             <  1:647215/232‑1 (MQ=255)
                         ttttAGCGGCTGATTATAGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGtt                                                                                                                                                                                                                           <  1:716187/251‑1 (MQ=255)
                                    gATTATAGGCGGTTTCCTTATGCTTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTTCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTTAATTATCAGGATTTATGCCGGCTAAATCATCTTCCAATGCGCCTTTTGACCACGCCGTGCTGACGTGGTACGCCAAGTTTGGGCGGaaaa                                                                                                                                                                                                                >  1:486620/1‑251 (MQ=255)
                                    gATTATAGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACg                                                                                                                                                                                                                                         >  1:660895/1‑226 (MQ=255)
                                    gATTATAGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACg                                                                                                                                                                                                                                         >  1:154268/1‑226 (MQ=255)
                                    gATTATAGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTa                                                                                                                                                                                                                                    >  1:702758/1‑231 (MQ=255)
                                    gATTATAGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGaaaa                                                                                                                                                                                                                >  1:128662/1‑251 (MQ=255)
                                                   ccTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGa                                                                                                                                                                                                                                           <  1:176488/209‑1 (MQ=255)
                                                   ccTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGgcag                                                                                                                                                                                                  >  1:735475/1‑250 (MQ=255)
                                                   ccTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGgcag                                                                                                                                                                                                  >  1:559965/1‑250 (MQ=255)
                                                               cAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAAc                                                                                                                                                                                       <  1:462707/249‑1 (MQ=255)
                                                               cAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACtt                                                                                                                                                                                     >  1:150457/1‑251 (MQ=255)
                                                                                            ttGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATg                                                                                                                                                        >  1:760655/1‑251 (MQ=255)
                                                                                             tGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATAc                                                                                                                                                                                <  1:269167/226‑1 (MQ=255)
                                                                                                    cTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTgcag                                                                                                                                                  >  1:564336/1‑249 (MQ=255)
                                                                                                      ttAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCaaa                                                                                                                                              >  1:854894/1‑251 (MQ=255)
                                                                                                               aagGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTCATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCATGCTGACGTGGTACGCCAAGTTCGCGCGGAAAAATTTGCCGTGTCAGCAAAATAAAACTATATACGGCGTTTGGTTGTCCAAAGTAATGTTGCAGCAAACGCAAGTga                                                                                                                                     <  1:74742/251‑1 (MQ=255)
                                                                                                                 ggTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTgacg                                                                                                                                   >  1:326608/1‑251 (MQ=255)
                                                                                                                 ggTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTgacg                                                                                                                                   >  1:857871/1‑251 (MQ=255)
                                                                                                                        gcTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGa                                                                                                                            >  1:415775/1‑251 (MQ=255)
                                                                                                                             gtgtTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTa                                                                                                                                                                                                                                    >  1:160577/1‑142 (MQ=255)
                                                                                                                             gtgtTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATAc                                                                                                                                                                                >  1:395329/1‑194 (MQ=255)
                                                                                                                             gtgtTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGt                                                                                                                                                                      >  1:31270/1‑204 (MQ=255)
                                                                                                                             gtgtTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGt                                                                                                                                                                      >  1:858577/1‑204 (MQ=255)
                                                                                                                             gtgtTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAAc                                                                                                                                             <  1:736834/229‑1 (MQ=255)
                                                                                                                             gtgtTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTg                                                                                                                                      <  1:673092/236‑1 (MQ=255)
                                                                                                                             gtgtTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATAc                                                                                                                         >  1:517826/1‑249 (MQ=255)
                                                                                                                             gtgtTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATAc                                                                                                                         >  1:835905/1‑249 (MQ=255)
                                                                                                                               gtTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTa                                                                                                                     >  1:205597/1‑251 (MQ=255)
                                                                                                                                       ctGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAgc                                                                                                             <  1:559672/251‑1 (MQ=255)
                                                                                                                                            ggTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCttt                                                                                                        >  1:849712/1‑251 (MQ=255)
                                                                                                                                                tGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTaa                                                                                                    <  1:533055/251‑1 (MQ=255)
                                                                                                                                                 gATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTaaa                                                                                                   >  1:266083/1‑251 (MQ=255)
                                                                                                                                                   tGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCCTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTaaaaa                                                                                                 <  1:447772/251‑1 (MQ=255)
                                                                                                                                                     tCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACg                                                                                               <  1:766295/251‑1 (MQ=255)
                                                                                                                                                      cGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTAttt                                                                                                                  >  1:763130/1‑231 (MQ=255)
                                                                                                                                                              gggTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAAt                                                                                      >  1:553735/1‑251 (MQ=255)
                                                                                                                                                                gTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAAc                                                                                                                                                                                       <  1:369757/152‑1 (MQ=255)
                                                                                                                                                                gTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATg                                                                                                                                                        >  1:404819/1‑183 (MQ=255)
                                                                                                                                                                gTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTAttt                                                                                                                  <  1:786601/221‑1 (MQ=255)
                                                                                                                                                                gTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAAttt                                                                                    >  1:896385/1‑251 (MQ=255)
                                                                                                                                                                  gAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGa                                                                                  >  1:476234/1‑251 (MQ=255)
                                                                                                                                                                            gTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAAc                                                                                                                                                                                       <  1:548282/140‑1 (MQ=255)
                                                                                                                                                                            gTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGt                                                                                                                                                            <  1:766856/167‑1 (MQ=255)
                                                                                                                                                                            gTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTaaaaa                                                                                                 >  1:733789/1‑226 (MQ=255)
                                                                                                                                                                            gTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTg                                                                         >  1:191101/1‑250 (MQ=255)
                                                                                                                                                                             ttAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGcc                                                                       <  1:799550/251‑1 (MQ=255)
                                                                                                                                                                                            cTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGCCAATGCGCCTTTGGa                                                         >  1:730498/1‑250 (MQ=255)
                                                                                                                                                                                                      aTTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACg                                                                                               <  1:880660/202‑1 (MQ=255)
                                                                                                                                                                                                      aTTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGCCAATGCGCCTTTGGACGAAGTGTTGc                                              <  1:621582/251‑1 (MQ=255)
                                                                                                                                                                                                        tATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGCCAATGCGCCTTTGGACGAAGTGTTGCAt                                            >  1:383709/1‑251 (MQ=255)
                                                                                                                                                                                                             ggATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGt                                                                                                                                                                      <  1:654543/124‑1 (MQ=255)
                                                                                                                                                                                                              gATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATAc                                                                                                                         >  1:604147/1‑168 (MQ=255)
                                                                                                                                                                                                              gATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACg                                                                                               <  1:272566/194‑1 (MQ=255)
                                                                                                                                                                                                               aTTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTgcagca                                                                                                                                                >  1:208619/1‑144 (MQ=255)
                                                                                                                                                                                                                tttATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGCCAATGCGCCTTTGGACGAAGTGTTGCATTTGTGGAc                                    <  1:874393/251‑1 (MQ=255)
                                                                                                                                                                                                                        ggCTCAATCATCTTCCAATGCTCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGCCAATGCGCCTTTGGACGAAGTGTTGCATTTGTGGACGGGCTTgg                            >  1:148436/1‑251 (MQ=255)
                                                                                                                                                                                                                        ggCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGCCAATGCGCCTTTGGACGAAGTGTTGCATTTGTGGACGGGCTTgg                            >  1:576917/1‑251 (MQ=255)
                                                                                                                                                                                                                          cTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGCCAATGCGCCTTTGGACGAAGTGTTGCATTTGTGGACGGGCTTGGGc                          <  1:135270/251‑1 (MQ=255)
                                                                                                                                                                                                                            cAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCAc                                                                            <  1:569372/199‑1 (MQ=255)
                                                                                                                                                                                                                              atcatcTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGCCAATGCGCCTTTGGACGAAGTGTTGCATTTGTGGACGGGCTTGGGCTAtt                      >  1:144808/1‑251 (MQ=255)
                                                                                                                                                                                                                               tcatcTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGTGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGCCAATGCGCCTTTGGACGAAGTGTTGCATTTGTGGACGGGCTTGGGCTATTa                     <  1:172106/251‑1 (MQ=255)
                                                                                                                                                                                                                               tcatcTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGCCAATGCGCCTTTGGACGAAGTGTTGCATTTGTGGACGGGCTTGGGCTATTa                     <  1:55114/251‑1 (MQ=255)
                                                                                                                                                                                                                               tcatcTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGCCAATGCGCCTTTGGACGAAGTGTTGCATTTGTGGACGGGCTTGGGCTATTa                     <  1:673520/251‑1 (MQ=255)
                                                                                                                                                                                                                                   cTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGt                                                                                                                                                       <  1:283728/117‑1 (MQ=255)
                                                                                                                                                                                                                                              ccTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGCCAATGCGCCTTTGGACGAAgt                                                   <  1:677225/206‑1 (MQ=255)
                                                                                                                                                                                                                                                   tGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGCCAATGCGCCTTTGGACGAAGTGTTGCATTTGTGGACGGGCTTGGGCTATTACGCGCGGGCGCGCAATTTg  >  1:622531/1‑250 (MQ=255)
                                                                                                                                                                                                                                                   tGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAATAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGCCAATGCGCCTTTGGAc                                                        >  1:784948/1‑196 (MQ=255)
                                                                                                                                                                                                                                                    gCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGCCAATGCGCCTTTGGACGAAGTGTTGCATTTGTGGACGGGCTTGGGCTATTa                     >  1:671683/1‑230 (MQ=255)
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                   
CTTTGAAATTGTTGTGTGCGGAAAATTTTAGCGGCTGATTATAGGCGGTTTCCTTATGATTAGCAATTTAGCCGATGAAACAAAAAACGCATTTGTTAATCTTTAGTGAAGAAGGTTTGCGCTTTGTGTTAAACTCTGCCGGTTTGATGTCGCCCACGGGGTGAAAAACACAGTTAAAAATAACCGCACTTTTATTGAATTATCAGGATTTATGCCGGCTCAATCATCTTCCAATGCGCCTTTTGCCCACGCCGTGCTGACGTGGTACGCCAAGTTCGGGCGGAAAAATTTGCCGTGGCAGCAAAATAAAACTTTATACGGCGTTTGGTTGTCCGAAGTAATGTTGCAGCAAACGCAAGTGACGACGGTGATACCTTATTTCGAGCGCTTTGTAAAAACGTTCCCGAATTTGACCGCACTTGCCAATGCGCCTTTGGACGAAGTGTTGCATTTGTGGACGGGCTTGGGCTATTACGCGCGGGCGCGCAATTTG  >  1/731824‑732316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.