| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 1480268 | 55 (0.630) | 6 (0.070) | 5/420 | 6.2 | 10.1% | intergenic (+147746/+121532) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| ? | 1 | = 1654597 | NA (NA) | intergenic (‑28472/‑44947) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GATGAAAAAGAAAGCGATTGAAATCCCGGAACAAACAGACTTTTCCCCAAAAGCGTTTAAAAAGCTGCAGCGAGAGCTGGCATTAGCACGTGCACAGATTGCTTACCTAAAGGAGTTGGAGGCACTCGACCGTCAAAAACAGCGACAGAAAAAAGAAAAATCATTGAAAGATTGAAGCCAAATCACGCGTTAAATGACTTACTTCGTGTGGCTAAAATGCCTCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1480043‑1480268‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgttTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGATAGAACGAGGCATTTTAGCCACACGAAGTAAGTCATTTAACG < 1/1654597‑1654349 GATGAAAAAGAAAGCGATTGAAATCCCGGAACAAACAGACTTTTCCCCAAAAGCGTTTAAAAAGCTGCAGCGAGAGCTGGCATTAGCACGTGCACAGATTGCTTACCTAAAGGAGTTGGAGGCACTCGACCGTCAAAAACAGCGACAGAAAAAAGAAAAATCATTGAAAGATTGAAGCCAAATCACGCGTTAAATGACTTACTTCGTGTGGCTAAAATGCCTCGTT < 1:824205/226‑1 GCATTAGCACGTGCACAGATTGCTTACCTAAAGGAGTTGGAGGCACTCGACCGTCAAAAACAGCGACAGAAAAAAGAAAAATCATTGAAAGATTGAAGCCAAATCACGCGTTAAATGACTTACTTCGTGTGGCTAAAATGCCTCGTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCA > 1:338931/1‑234 GTGCACAGATTGCTTACCTAAAGGAGTTGGAGGCACTCGACCGTCAAAAACAGCGACAGAAAAAAGAAAAATCATTGAAAGATTGAAGCCAAATCACGCGTTAAATGACTTACTTCGTGTGGCTAAAATGCCT > 1:817342/1‑133 AAAGATTGAAGCCAAATCACGCGTTAAATGACTTACTTCGTGTGGCTAAAATGCCTCGTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACT < 1:709404/251‑1 gtttTGCCTCGTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGATAGAACGAGGCATTTTAGC > 1:456071/5‑239 GCCTCGTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGATAGAACGAGGCATTTTAGCCACACGAAGTAAGTCAT > 1:847494/1‑251 CCTCGTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGATAGAACGAGGCATTTTAGCCACACGAAGTAAGTCATT > 1:734988/1‑251 CCTCGTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGATAGAACGAGGCATTTTAGCCACACGAAGTAAGTCAT < 1:215071/250‑1 TCGTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTG < 1:838348/106‑1 TCGTTTTCCATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGAT < 1:131697/213‑1 GTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAAC > 1:308548/1‑193 GTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACAC < 1:425020/64‑1 TTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGATAGAACGAGGCATTTTAGCCACACGAAGTAAGTCATTTAACG > 1:491060/1‑251 GATGAAAAAGAAAGCGATTGAAATCCCGGAACAAACAGACTTTTCCCCAAAAGCGTTTAAAAAGCTGCAGCGAGAGCTGGCATTAGCACGTGCACAGATTGCTTACCTAAAGGAGTTGGAGGCACTCGACCGTCAAAAACAGCGACAGAAAAAAGAAAAATCATTGAAAGATTGAAGCCAAATCACGCGTTAAATGACTTACTTCGTGTGGCTAAAATGCCTCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1480043‑1480268‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgttTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGATAGAACGAGGCATTTTAGCCACACGAAGTAAGTCATTTAACG < 1/1654597‑1654349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |